EY660216

Overview
NameEY660216
Unique NameEY660216
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7545 contig Csv1_Contig7545:1..692. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY660216 vs. ExPASy Swiss-Prot
Match: YIHQ_ECOLI (Alpha-glucosidase yihQ OS=Escherichia coli (strain K12) GN=yihQ PE=3 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 3.931e-29
Identity = 68/152 (44.74%), Postives = 91/152 (59.87%), Query Frame = 1 
Query:   13 LLRWMELNAFTTVFRTHEGNKPSFNSQFYSNQQTLSHFARFAKVYRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEILVVPILDKGKKKVRVYFPVGETSTWQHIWTEKIFTGQGSEAWVEAPIGYPAVFVKADS 468
            LLRW + +AFT + RTHEGN+P  N QF  + +T++HFAR   V+   K Y  + V   ++ GLPV R LFLHY DD     L Y Q+L+G +ILV P+ ++G+    +Y P      W H WT + F  +G E  V APIG P VF +ADS
Sbjct:  521 LLRWCDFSAFTPMMRTHEGNRPGDNWQFDGDAETIAHFARMTTVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAHTYTLKY-QYLLGRDILVAPVHEEGRSDWTLYLP---EDNWVHAWTGEAF--RGGEVTVNAPIGKPPVFYRADS 666
[Close]
BLAST of EY660216 vs. ExPASy Swiss-Prot
Match: AGL2_BACTQ (Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 46/154 (29.87%), Postives = 70/154 (45.45%), Query Frame = 1 
Query:   13 LLRWMELNAFTTVFRTHEGNKPSFNSQFYSNQQTLSHFARFAKVYRAWKFYRIKLVKEASQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEILVVPILDKGKKKVRVYFPVGETSTWQHIWTEKIFTGQGSEAWVEAPIGYPAVFVKADSIV 474
            L RWM++ AFT  FR H          +   ++      ++ ++   W  +   L  EA + G PV R LF  YPDD+    L Y +FLVG  +L+ PI+     +   YFP G    W   WT ++  G G    + A +    +F+K  S +
Sbjct:  526 LTRWMQVGAFTPYFRNHCAIGFRRQEPWAFGEKYERIIKKYIRLRYQWLPHLYTLFAEAHETGAPVMRPLFFEYPDDENTYNL-YDEFLVGANVLIAPIMTPSTTRRVAYFPKG---NWVDYWTGEVLEG-GQYHLISADLETLPIFIKQGSAI 674
The following BLAST results are available for this feature:
BLAST of EY660216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
YIHQ_ECOLI3.931e-2944.74Alpha-glucosidase yihQ OS=Escherichia coli (strain... [more]
AGL2_BACTQ1.357e-1329.87Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefa... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-G08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660216 ID=EY660216; Name=EY660216; organism=Citrus sinensis; type=EST; length=692bp
CCACGCGTCCGGCTGTTGCGATGGATGGAGCTAAATGCTTTCACCACCGT
TTTCCGGACCCATGAAGGAAACAAACCATCCTTCAACAGCCAGTTCTACT
CAAACCAACAAACGTTATCCCATTTTGCACGATTTGCTAAAGTATATAGA
GCATGGAAATTCTACAGAATCAAACTTGTAAAGGAGGCTTCTCAGAAAGG
TCTTCCTGTATGCCGTCACCTATTTCTCCACTACCCAGATGATGACAAGG
TGCAGAGATTGAGTTACCAGCAGTTTTTGGTGGGTACTGAGATCTTAGTT
GTGCCAATCCTAGACAAAGGAAAGAAGAAAGTCAGAGTTTATTTTCCAGT
TGGAGAAACCAGCACTTGGCAACATATTTGGACGGAAAAGATATTTACAG
GGCAAGGTTCTGAAGCTTGGGTGGAAGCTCCAATTGGCTATCCTGCTGTA
TTTGTTAAGGCTGATTCCATTGTTGGAGAAACTTTTAGGAAAAACCTAAG
AAATTCAGACATTCTTTAAGAAAGCAGCTCAAAAGGGAGGGCTGGTTTCT
TAATTCTGTTTCAATGAGTAGACTGATTTCTGCAATAACATTTAACTTAG
AATAGTAATAAACACTTCCCATGTTATTCGAAAAGGTATATATTCTAGTC
CATGATCAAGTAGTAGTCACCCTCTTTTTGGCTACTTAATTA
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