EY660210

Overview
NameEY660210
Unique NameEY660210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12395 contig Csv1_Contig12395:1..934. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 9.610e-29
Identity = 48/77 (62.34%), Postives = 55/77 (71.43%), Query Frame = 3
Query:  528 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLFCVP 758
            MALP SAIGFEGYEKRLE+SFFE   FADP G+GLR+L+     +   PA   +  SLSN+Y DSYVLSES LF  P
Sbjct:    1 MALPASAIGFEGYEKRLEISFFESSFFADPDGKGLRALNKSQIDEILEPAECTIVDSLSNQYLDSYVLSESSLFVYP 77          

HSP 2 Score: 53.5286 bits (127), Expect = 9.610e-29
Identity = 29/55 (52.73%), Postives = 31/55 (56.36%), Query Frame = 1
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLKXXXXXXXXXXXXXXXXXXXIFAGAQPF 906
            S FVYPYK+IIKTCGTT+LLL IPA LK                   IF GAQ F
Sbjct:   72 SLFVYPYKIIIKTCGTTKLLLSIPAILKLAESLSLSVRNVKYTRGSFIFPGAQSF 126          
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.629e-28
Identity = 50/74 (67.57%), Postives = 57/74 (77.03%), Query Frame = 3
Query:  528 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLF 749
            MALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLS     +   PA   +  SLSN+  DSYVLSES LF
Sbjct:    3 MALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLF 76          

HSP 2 Score: 48.521 bits (114), Expect = 1.629e-28
Identity = 27/55 (49.09%), Postives = 29/55 (52.73%), Query Frame = 1
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLKXXXXXXXXXXXXXXXXXXXIFAGAQPF 906
            S FVY YK+IIKTCGTT+LLL IP  LK                   IF GAQ F
Sbjct:   74 SLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPGAQSF 128          
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.091e-28
Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 3
Query:  531 ALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLF 749
            ALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLS     +   PA   +  SLSN+  DSYVLSES LF
Sbjct:    4 ALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLF 76          

HSP 2 Score: 48.521 bits (114), Expect = 6.091e-28
Identity = 27/55 (49.09%), Postives = 29/55 (52.73%), Query Frame = 1
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLKXXXXXXXXXXXXXXXXXXXIFAGAQPF 906
            S FVY YK+IIKTCGTT+LLL IP  LK                   IF GAQ F
Sbjct:   74 SLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPGAQSF 128          
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.344e-27
Identity = 48/75 (64.00%), Postives = 57/75 (76.00%), Query Frame = 3
Query:  525 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLF 749
            +M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSLS     +   PA   +  +LSN+Y DSYVLSES LF
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLF 76          

HSP 2 Score: 47.3654 bits (111), Expect = 1.344e-27
Identity = 26/55 (47.27%), Postives = 29/55 (52.73%), Query Frame = 1
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLKXXXXXXXXXXXXXXXXXXXIFAGAQPF 906
            S FVY YK+IIKTCGTT+LLL IP  L+                   IF GAQ F
Sbjct:   74 SLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSF 128          
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.964e-27
Identity = 47/75 (62.67%), Postives = 57/75 (76.00%), Query Frame = 3
Query:  525 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLF 749
            +M LPVSAIGFEG+EKRLE+SF EPG+F+DP G+GLRSLS     +   PA   +  +LSN+Y DSYVLSES LF
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFSDPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLF 76          

HSP 2 Score: 47.3654 bits (111), Expect = 2.964e-27
Identity = 26/55 (47.27%), Postives = 29/55 (52.73%), Query Frame = 1
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLKXXXXXXXXXXXXXXXXXXXIFAGAQPF 906
            S FVY YK+IIKTCGTT+LLL IP  L+                   IF GAQ F
Sbjct:   74 SLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSF 128          
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.860e-27
Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 3
Query:  528 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLF 749
            M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSL+     +   PA   +  +LSN+Y DSYVLSES LF
Sbjct:    1 MDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLTKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLF 74          

HSP 2 Score: 47.3654 bits (111), Expect = 3.860e-27
Identity = 26/55 (47.27%), Postives = 29/55 (52.73%), Query Frame = 1
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLKXXXXXXXXXXXXXXXXXXXIFAGAQPF 906
            S FVY YK+IIKTCGTT+LLL IP  L+                   IF GAQ F
Sbjct:   72 SLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSF 126          
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.511e-27
Identity = 50/77 (64.94%), Postives = 55/77 (71.43%), Query Frame = 3
Query:  528 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLFCVP 758
            MAL  SAIGFEGYEKRLE+SFFE G+F+DP GRGLR+LS     K   PA   + SSLSN   DSYVLSES LF  P
Sbjct:    1 MALSTSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYP 77          

HSP 2 Score: 46.2098 bits (108), Expect = 8.511e-27
Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 1
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLK 825
            S FVYPYK+IIKTCGTT+LLL IP  L+
Sbjct:   72 SLFVYPYKIIIKTCGTTKLLLSIPPILE 99          
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.181e-26
Identity = 49/77 (63.64%), Postives = 54/77 (70.13%), Query Frame = 3
Query:  528 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLFCVP 758
            MAL  SAIGFEGYE RLE+SFFE G+F+DP GRGLR+LS     K   PA   + SSLSN   DSYVLSES LF  P
Sbjct:    1 MALSTSAIGFEGYENRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYP 77          

HSP 2 Score: 46.2098 bits (108), Expect = 3.181e-26
Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 1
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLK 825
            S FVYPYK+IIKTCGTT+LLL IP  L+
Sbjct:   72 SLFVYPYKIIIKTCGTTKLLLSIPPILE 99          
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.438e-25
Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 3
Query:  528 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLF 749
            M+  VSAIGFEG+EKRLE+SFFEP  FADP G+GLR LS     ++  PA   + +SLSNE+ DSYVLSES LF
Sbjct:    1 MSSEVSAIGFEGFEKRLEISFFEPSFFADPEGKGLRVLSKNQLDEFLGPAECTIVASLSNEHVDSYVLSESSLF 74          

HSP 2 Score: 45.4394 bits (106), Expect = 4.438e-25
Identity = 28/67 (41.79%), Postives = 33/67 (49.25%), Query Frame = 1
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLKXXXXXXXXXXXXXXXXXXXIFAGAQPF-HNELLLGITVL 939
            S FVY YK+IIKTCGTT+LL  IP  LK                   IF GAQ + H      ++VL
Sbjct:   72 SLFVYAYKIIIKTCGTTKLLKSIPPILKLADSLSLTVRSVRYTRGCFIFPGAQSYPHRSFSEEVSVL 138          
BLAST of EY660210 vs. ExPASy Swiss-Prot
Match: DCAM_VICFA (S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.274e-24
Identity = 44/72 (61.11%), Postives = 54/72 (75.00%), Query Frame = 3
Query:  534 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPANAQLFSSLSNEYPDSYVLSESKLF 749
            + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+     +   PA   + SSL+NE  DSYVLSES LF
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLF 72          

HSP 2 Score: 48.521 bits (114), Expect = 1.274e-24
Identity = 27/55 (49.09%), Postives = 29/55 (52.73%), Query Frame = 1
Query:  742 SSFVYPYKVIIKTCGTTRLLLFIPANLKXXXXXXXXXXXXXXXXXXXIFAGAQPF 906
            S FVY YK+IIKTCGTT+LLL IP  LK                   IF GAQ F
Sbjct:   70 SLFVYAYKIIIKTCGTTKLLLAIPPILKLAESISLDVRAVRYTRGSFIFPGAQSF 124          
The following BLAST results are available for this feature:
BLAST of EY660210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
DCAM_CATRO9.610e-2962.34S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]
DCAM_NICSY1.629e-2867.57S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_TOBAC6.091e-2867.12S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_SOLTU1.344e-2764.00S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_DATST2.964e-2762.67S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_SOLCI3.860e-2763.51S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_IPONI8.511e-2764.94S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_IPOBA3.181e-2663.64S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_DAUCA4.438e-2562.16S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_VICFA1.274e-2461.11S-adenosylmethionine decarboxylase proenzyme OS=Vi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-G02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660210 ID=EY660210; Name=EY660210; organism=Citrus sinensis; type=EST; length=944bp
CCACGCGTCCGCGGACGCGTGGGCGGACGGAAGGAAATCGAAATTCGTTT
TGTGAAACAGAGTTAAAAATCAACCCTTCTTTAATCCTCAAGGAATTTTA
TTATTTTTTTGGTCTCTGAATCGAGGGTTTTGCTTCTTGGTTTAGTGGGT
TTGTTTTCGTTATATTATCTGAGAAAGGCTGAATGATCTAATGGAGTCAA
AAGGTGGTAAGAAGAAGTCTAGCAGTAGTTCCTTATTCTACGAAGCTCCT
CTTGGTTACAGCATTGAAGACGTTCGACCTCACGGTGGCATAAAGAAGTT
CAGATCAGCTGCTTACTCAAACTGCGTCCGCAAACCATCCTGAGATCGTC
CAATTTGTCCCATACCCCCCCAAAAAAAAGCTCACTACTACTGCAATTTT
AATTTTTTTTAGTTTTAGCCGTCTTAATACTGCAATTTACTTGGCCTATT
TCTTTTTCGACTTCCCTCGTTCTCTCGTTCTGCCCTCTTTGCTCTTTGCA
ATTGTCATTTGTTTTCTGTAAGGCAAGATGGCCTTGCCAGTCTCTGCAAT
TGGATTTGAAGGTTATGAAAAGAGGCTTGAAGTTTCCTTTTTTGAGCCTG
GTGTCTTTGCTGATCCTGGAGGTAGGGGCCTCCGCTCTCTGTCAAACATC
AATTGGATGAAATACTGAAACCCTGCGAATGCACAATTGTTTTCTTCGTT
GTCAAATGAATATCCTGATTCATATGTCCTCTCAGAATCAAAGCTCTTTT
GTGTACCCTTACAAGGTTATTATCAAAACTTGTGGGACTACCAGGCTGCT
TCTTTTCATCCCTGCCAATCTCAAGTTATCTGAGTCCCTCTCGTTGGCTG
GTCGATCTGGGAGATCCACTCGGGGAAGCTCCATATTTGCTGGGGCTCAG
CCATTTCACAACGAACTTCTCTTAGGAATAACTGTCCTGATGGA
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