EY660209

Overview
NameEY660209
Unique NameEY660209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY660209_ssr231 microsatellite EY660209_ssr231:231..242. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY660209 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 282.722 bits (722), Expect = 1.926e-75
Identity = 138/207 (66.67%), Postives = 162/207 (78.26%), Query Frame = 3
Query:  168 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNNPMGGVFNAGGSK*LGNQRWSRKINWNKLPF-ILIKRL*Y*GLPNPGP 779
            RPATF+EDFK  WS++H+RQ+E G+AIQLVLDQ++GCGFASKR+YLFGRVSMKIKL+PGDSAGTVTAFYMNS+T  VRDELDFEFLGNR+GQPY+VQTNI+A+GKGDREQRVNLWFDP+ DYH YTILW+H HIVFYVDDVPIR YKN  +    +P + PMG       +     +    KI+W+K PF    K     G P PGP
Sbjct:   31 RPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGP 237          
BLAST of EY660209 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 3.075e-73
Identity = 134/207 (64.73%), Postives = 159/207 (76.81%), Query Frame = 3
Query:  168 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNNPMGGVFNAGGSK*LGNQRWSRKINWNKLPF-ILIKRL*Y*GLPNPGP 779
            RPA F +DF++ WSD H+ QI+GGRAIQL LD +SGCGFASK+QYLFGRVSMKIKL+PGDSAGTVTAFYMNS+T++VRDELDFEFLGNR+GQPYTVQTN++A+GKGDREQRVNLWFDP+ D+H Y I WNH  IVFYVD+VPIRVYKN  + + P+P   PMG       +     +    KINW++ PF    K     G P PGP
Sbjct:   30 RPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGP 236          
BLAST of EY660209 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.992e-52
Identity = 102/187 (54.55%), Postives = 126/187 (67.38%), Query Frame = 3
Query:  180 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNNPMGGVFNAGGSK*LGNQRWSRKINWNKLPFI 734
            F  ++  TW+  H++ + GG  IQL LD+ +G GF SK  YLFG  SM IKLVPGDSAGTVTAFY++S T    DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN + IVFYVDD PIRV+KNS      FP N PM    +   +     +    K +W+K PFI
Sbjct:   31 FGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSS-TNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFI 216          
BLAST of EY660209 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.707e-52
Identity = 98/187 (52.41%), Postives = 126/187 (67.38%), Query Frame = 3
Query:  180 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNNPMGGVFNAGGSK*LGNQRWSRKINWNKLPFI 734
            F  ++  TW+  H++ + GG  + LVLD+ +G GF SK  YLFG  SM IK+V GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  G G+REQR+NLWFDP+ DYH Y++LWN + IVF+VDDVPIRV+KNS      FP N PM    +   +     +    K NW K PF+
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFV 217          
BLAST of EY660209 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.371e-51
Identity = 95/186 (51.08%), Postives = 125/186 (67.20%), Query Frame = 3
Query:  180 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNNPMGGVFNAGGSK*LGNQRWSRKINWNKLPF 731
            F ++++ +W+  H++ + GG  + LVLD++SG GF SK+ YLFG  SMK+KLV GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN   IV +VDDVPIR +KNS      FP N PM    +   +     +    K +W+  PF
Sbjct:   32 FWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPF 216          
BLAST of EY660209 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.145e-50
Identity = 99/187 (52.94%), Postives = 126/187 (67.38%), Query Frame = 3
Query:  180 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNNPMGGVFNAGGSK*LGNQRWSRKINWNKLPFI 734
            F  ++  TW+  H++   GG  IQL LD+ +G GF SK  YLFG  SM IK+VPGDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP  +YH Y+ILWN + IVF+VD+VPIRV+KNS      FP + PM    +   +     +    K +W+K PFI
Sbjct:   33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFI 218          
BLAST of EY660209 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.658e-50
Identity = 94/187 (50.27%), Postives = 126/187 (67.38%), Query Frame = 3
Query:  180 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNNPMGGVFNAGGSK*LGNQRWSRKINWNKLPFI 734
            F +++  TW+  H+  + GGR +QL LD+ +G GF ++  YLFG  SM IKLV GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN+++ GKGDREQR+ LWFDP  DYH Y++LWN + I F+VDD PIRV+KNS      +P + PM    +   +     +    K +W+K PF+
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFV 217          
BLAST of EY660209 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.778e-50
Identity = 100/195 (51.28%), Postives = 125/195 (64.10%), Query Frame = 3
Query:  177 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAP----FPMNNPM---GGVFNAGGSK*LGNQRWSRKINWNKLPFI 734
            +F ++F + WS+ H    + G    L LD ++GCGF +K  Y FG  SMK+KLV GDSAG VTA+YM S       RDE+DFEFLGNRTGQPY +QTN+Y NG G+RE R +LWFDP  DYH Y+ILWN+H +VF+VD VPIRVYKNS + P    FP   PM     ++NA      G      K +W K PF+
Sbjct:   24 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGG---LEKTDWKKAPFV 215          
BLAST of EY660209 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.097e-49
Identity = 93/186 (50.00%), Postives = 124/186 (66.67%), Query Frame = 3
Query:  180 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNNPMGGVFNAGGSK*LGNQRWSRKINWNKLPF 731
            F ++++ +W+  H++ + GG    L+LD++SG GF SK+ YLFG  SMK++LV GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKG+REQR+ LWFDP   YH Y++LWN + IV +VDDVPIR +KNS      FP N PM    +   +     +    K NW   PF
Sbjct:   33 FWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPF 217          
BLAST of EY660209 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48
Identity = 94/187 (50.27%), Postives = 124/187 (66.31%), Query Frame = 3
Query:  180 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNNPMGGVFNAGGSK*LGNQRWSRKINWNKLPFI 734
            F  ++  TW+  H +Q+ GG  +QL+LD+ +G GF SK  YLFG  SM IKL  GD+AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR+ LWFDP+  YH Y++LWN + IVF+VD++PIRV+KN+      FP N PM    +   +     +    K NW   PFI
Sbjct:   34 FGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFI 219          
The following BLAST results are available for this feature:
BLAST of EY660209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH6_ARATH1.926e-7566.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH3.075e-7364.73Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN2.992e-5254.55Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH5_ARATH8.707e-5252.41Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC7.371e-5151.08Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN2.145e-5052.94Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT3.658e-5050.27Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH4.778e-5051.28Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC3.097e-4950.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB3.424e-4850.27Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-G01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660209 ID=EY660209; Name=EY660209; organism=Citrus sinensis; type=EST; length=901bp
TTCCCGACCCACGCGTCCGCACAACATATAATTAAAGATCTCTTTCTAAT
TAGTAACAGATAATATTTTATTGTACGGCTTGTTTTACAGCTATGGCTAT
CCTAAGAAATGCAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCT
GCTCTTGCGTTTTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTC
ACATGGTCCGATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCA
GCTAGTTCTAGACCAAAATTCAGGATGTGGGTTTGCCTCCAAAAGGCAGT
ACTTGTTCGGGCGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCT
GCTGGAACTGTCACTGCATTTTATATGAATTCCAACACCGAAAATGTGAG
AGACGAGCTTGATTTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACA
CGGTCCAGACCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAGAGA
GTGAACCTCTGGTTTGACCCTGCTGCAGATTATCACCTTTACACTATTCT
CTGGAACCATCACCATATTGTCTTCTATGTGGATGATGTGCCCATCAGGG
TTTACAAAAACAGTGGAAGGGCTCCATTTCCAATGAACAACCCCATGGGG
GGTGTATTCAACGCTGGGGGAAGCAAATGACTGGGCAACCAGAGGTGGTC
TAGAAAAATAAATTGGAACAAGCTCCCTTTTATTCTTATTAAGAGACTTT
GATATTGAGGGCTGCCCAATCCTGGACCACAAATGTGGCTCCGACCCAGG
TAATGTGGGGAGGCAAAAATTTCCAGCCCTCCCGCCCTGGAAACAGAAGA
TACAAAGGGGTCCCCCCACCCCCTGACTCTTATTATTGCCGGAATAATCA
G
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