EY660206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660206 vs. ExPASy Swiss-Prot
Match: RGLG2_ARATH (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.532e-62 Identity = 78/152 (51.32%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 309 FVNFTEIMSKNVDRSRKETEFALAALMEIPSQYKAALEFNILGAQRGKAVDRVSLPPP-QYGAASQNTPK-----TXXXXXXXXXXXXGHERVVGTAPPASSTSDNHVCPICLTDPKDMAFXXXXXXXXXXXXDLDLCPICRSFIQTRIKLY 746 FVNFTEIM+KN +S KETEFAL+ALMEIP QYKA +E N+LG + G +R LPPP + G++S N+PK + H R PP SS SDN +CPICL++PKDMAF DL +CPICR+ IQTRIKLY Sbjct: 317 FVNFTEIMAKNKAQSLKETEFALSALMEIPQQYKATIELNLLGRRNGYIPERFPLPPPMRGGSSSYNSPKPSRLPSFKPSVPPHPTEGYHVRSSPVPPPTSSASDNQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAPIQTRIKLY 468 HSP 2 Score: 117.857 bits (294), Expect = 2.532e-62 Identity = 56/66 (84.85%), Postives = 62/66 (93.94%), Query Frame = 2 Query: 11 ADGLATRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQ 208 ADG TRSVDTE+GQLS QE+KTV+AIV+AS+ PLSI+LVGVGDGPWDMMREFDDNIPARAFDNFQ Sbjct: 251 ADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQ 316
BLAST of EY660206 vs. ExPASy Swiss-Prot
Match: RGLG1_ARATH (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.245e-59 Identity = 70/146 (47.95%), Postives = 89/146 (60.96%), Query Frame = 3 Query: 309 FVNFTEIMSKNVDRSRKETEFALAALMEIPSQYKAALEFNILGAQRGKAVDRVSLPPPQYGAASQNTPKTXXXXXXXXXXXXGHERVVGTAPPASSTSDNHVCPICLTDPKDMAFXXXXXXXXXXXXDLDLCPICRSFIQTRIKLY 746 FVNFTEIMSKN D+SRKETEFAL+ALMEIP QYKA +E N+LG + G R+ LPPP +S ++ + +++ SS D +CPICL++PK+MAF DL +CPICR+ IQTRIKLY Sbjct: 351 FVNFTEIMSKNKDQSRKETEFALSALMEIPPQYKATIELNLLGVRNGNIPQRIPLPPPVQSGSSFSSSRIPNFEPSVPPYPFESKQM-------SSADDIQLCPICLSNPKNMAFGCGHQTCCECGPDLKVCPICRAPIQTRIKLY 489 HSP 2 Score: 118.242 bits (295), Expect = 7.245e-59 Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 2 Query: 11 ADGLATRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQ 208 ADG TRSVDTEHG+LS QE+KTV+AIVKAS PLSI+LVGVGDGPWDMM+EFDDNIPARAFDNFQ Sbjct: 285 ADGQVTRSVDTEHGRLSPQEQKTVDAIVKASTLPLSIVLVGVGDGPWDMMQEFDDNIPARAFDNFQ 350
BLAST of EY660206 vs. ExPASy Swiss-Prot
Match: CPNA2_CAEEL (Copine domain-containing protein 2 OS=Caenorhabditis elegans GN=cpna-2 PE=2 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 9.021e-17 Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 2 Query: 50 GQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDNF 205 GQ+++ EK +AI AS YPLSII+VGVGDGPW+MM FDDNIP R FDNF Sbjct: 7452 GQVTN-EKINQKAIAAASHYPLSIIMVGVGDGPWNMMGRFDDNIPKRLFDNF 7502 HSP 2 Score: 35.8094 bits (81), Expect = 9.021e-17 Identity = 23/48 (47.92%), Postives = 28/48 (58.33%), Query Frame = 3 Query: 309 FVNFTEIM--SKNVDRSRKETEFALAALMEIPSQYKAALEFNILGAQR 446 FV+F ++M + N D S FAL ALMEIP QYKA E +L R Sbjct: 7504 FVDFHKVMFNAPNADAS-----FALNALMEIPDQYKAIKELGLLKHSR 7546 The following BLAST results are available for this feature:
BLAST of EY660206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660206 ID=EY660206; Name=EY660206; organism=Citrus sinensis; type=EST; length=904bpback to top |