EY660123

Overview
NameEY660123
Unique NameEY660123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10130 contig Csv1_Contig10130:496..1370. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY660123 vs. ExPASy Swiss-Prot
Match: Y4105_ARATH (Uncharacterized protein At4g01050 OS=Arabidopsis thaliana GN=At4g01050 PE=1 SV=2)

HSP 1 Score: 364.385 bits (934), Expect = 4.786e-100
Identity = 184/252 (73.02%), Postives = 208/252 (82.54%), Query Frame = 3 
Query:   12 VPLVLSQVLNK-PKSWGVESARNAYAKLGDDASAQLLDIRAPVEFRQVGSPDVRGLGKRPVSIVYKGDDKPGFLKKLSLKFKEPENTTLFILDKFDGNSELVAELVTINGFKNAYTIKDGAEGPRGWMNSGLPWIPPKKALGLDLSNLTETISGAIGEGSEGFSVTXXXXXXXXXXXXXFSEIETILQILGSAALVQFASKKLLFAEDRKQTLQQVDEFLNTKVAPIELADDIKQIGKTLLPSPANGLALPA 764
            VP VLSQVLNK PKSWGVESA+NAY KLG D +AQLLDIRA  +FRQVGSP+++GLGK+ VS VY G+DKPGFLKKLSLKFK+PENTTL+ILDKFDGNSELVAELV +NGFK+AY IKDGAEGPRGW+NS LPWI PKK L LDLS+LT++ISG  GE S+G SV              F+EIETILQ+LGSAALVQ A KKLLFAEDRKQTL+QVDEFLNTKVAP EL D++K+IGK LLP   +  ALPA
Sbjct:  115 VPFVLSQVLNKKPKSWGVESAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKKTLSLDLSSLTDSISGVFGESSDGVSVALGVAAAAGLSVFAFTEIETILQLLGSAALVQLAGKKLLFAEDRKQTLKQVDEFLNTKVAPKELVDELKEIGKALLPQSTSNKALPA 366
The following BLAST results are available for this feature:
BLAST of EY660123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4105_ARATH4.786e-10073.02Uncharacterized protein At4g01050 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-G08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660123 ID=EY660123; Name=EY660123; organism=Citrus sinensis; type=EST; length=874bp
CCACGCGTCCGGTTCCATTAGTTTTGTCTCAGGTTCTGAACAAGCCTAAG
TCATGGGGTGTTGAGTCTGCAAGGAATGCTTATGCAAAGTTGGGTGACGA
TGCGAGTGCCCAGTTGCTTGATATAAGAGCTCCCGTGGAATTTCGGCAAG
TAGGTAGTCCTGATGTCCGGGGTTTGGGGAAGAGGCCGGTTTCGATTGTT
TACAAAGGTGACGATAAGCCGGGCTTCTTGAAGAAGCTGTCTTTGAAGTT
CAAGGAACCAGAAAATACTACATTGTTCATTCTAGACAAATTTGATGGGA
ACTCTGAACTGGTTGCTGAGTTGGTCACCATAAATGGATTCAAAAATGCA
TACACTATAAAAGATGGAGCAGAAGGACCTCGTGGATGGATGAACAGTGG
TCTTCCTTGGATACCGCCAAAGAAAGCATTGGGTCTTGACCTGAGCAATT
TGACAGAAACTATCAGTGGTGCAATTGGAGAGGGCTCGGAGGGCTTTTCT
GTTACCCTTGCAATTGCTGCAGCTGCAGGATTGGGTGTTTTGGCATTTTC
AGAGATAGAAACGATATTGCAAATTCTAGGCTCAGCTGCTCTTGTTCAAT
TTGCTAGCAAGAAGCTCCTGTTTGCAGAGGATCGGAAACAAACACTACAG
CAGGTTGATGAATTCCTGAACACCAAGGTCGCCCCTATAGAGCTTGCTGA
TGACATAAAGCAAATTGGAAAGACACTTCTACCATCACCGGCAAATGGGC
TGGCTCTCCCTGCCCTCACTGACAGCAAAGTCAGAAGGCAGATGATTCAC
CTGANGCTGTCCCCCAGCCAAAAGTAGAAGCAGCTGCAGACCCCCCTCCC
AAGTAAATTCTGTGCCAAAACAGA
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