EY660113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY660113 vs. ExPASy Swiss-Prot
Match: PSBR_ARATH (Photosystem II 10 kDa polypeptide, chloroplastic OS=Arabidopsis thaliana GN=PSBR PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.867e-16 Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 1 Query: 67 KPAPFTVGKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGINGGMDLREGLDASGRKAK 240 KPA FTV K+AARGLPSL A+ SFKIVA G KIKTDKP+GING MDLR+G+DASGRK K Sbjct: 13 KPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMDLRDGVDASGRKGK 73
BLAST of EY660113 vs. ExPASy Swiss-Prot
Match: PSBR_BRACM (Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica campestris GN=PSBR PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.938e-14 Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 1 Query: 67 KPAPFTVGKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGINGGMDLREGLDASGRKAK 240 KPA FTV K +ARGLPSL + +SF+IVA G KIKTDKP+G+NG MDLR+G+DASGRK K Sbjct: 13 KPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLRDGVDASGRKGK 74
BLAST of EY660113 vs. ExPASy Swiss-Prot
Match: PSBR_TOBAC (Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana tabacum GN=PSBR PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.317e-14 Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 1 Query: 67 KPAPFTVGKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGINGGMDLREGLDASGRKAK 240 KPAPF+V K+A +GLPSLA++S F++ A G K+KTDKPYGING M LR+G+DASGRK K Sbjct: 9 KPAPFSVEKTAVKGLPSLARSSSSFRVQASGVKKLKTDKPYGINGSMSLRDGVDASGRKQK 69
BLAST of EY660113 vs. ExPASy Swiss-Prot
Match: PSBR_SOLTU (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum tuberosum GN=PSBR PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.277e-12 Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = 1 Query: 79 FTVGKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGINGGMDLREGLDASGRKAK 240 FT+ K++ +GLPSLA++S FK+VA G K+KTDKPYGING M LR+G+DASGRK K Sbjct: 15 FTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPK 71
BLAST of EY660113 vs. ExPASy Swiss-Prot
Match: PSBR_SOLLC (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum lycopersicum GN=PSBR PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11 Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 1 Query: 79 FTVGKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGINGGMDLREGLDASGRKAK 240 FT+ K + +GLPSL ++S FK+VA G K+KTDKPYGING M LR+G+DASGRK K Sbjct: 15 FTLEKISVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPK 71 The following BLAST results are available for this feature:
BLAST of EY660113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660113 ID=EY660113; Name=EY660113; organism=Citrus sinensis; type=EST; length=910bpback to top |