EY660077

Overview
NameEY660077
Unique NameEY660077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY660077 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.769e-11
Identity = 71/234 (30.34%), Postives = 101/234 (43.16%), Query Frame = 1 
Query:    1 PRVRTLICYG--AIESSG-ALSITPGPPPNLPIR-KVGRVLYGKPLSLQRSFID------TTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPGDKFPPL----AVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDV--DLKSGRAIQVRIYYNPDFGQLSVYAAYSGETLVK--VVEKPINLSDIIPTPVYVGFTAATGDFLEKHEVINWTFNS 648
            P  R LI  G   I S G +L +T       P+R  VGR LY  PL L  S  +      TT T  +S   + T+  GDG+ F  A  +        G  LGL S        L    AVE DT +N N                + N + S   V    ++G     +I YN D  +LSV ++Y      +   V   ++L   +P  V VGF+ +TG +++ H +++WTFNS
Sbjct:   48 PDQRDLILQGDAKISSGGDSLQLTKTDTSGKPVRGSVGRALYYTPLHLWDSSTNRLASFQTTFTFVLS---SPTNNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNN------WDPSHRHIGIDVNTIKSSATVRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGGYVQNHNILSWTFNS 272
The following BLAST results are available for this feature:
BLAST of EY660077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEC2_CLALU1.769e-1130.34Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660077 ID=EY660077; Name=EY660077; organism=Citrus sinensis; type=EST; length=845bp
CCACGCGTCCGGACCCTCATTTGCTACGGAGCGATTGAAAGTTCCGGCGC
CTTAAGCATCACACCAGGCCCTCCACCAAACCTGCCGATCAGAAAGGTTG
GACGGGTTTTATACGGCAAGCCTCTGAGTTTACAGCGATCTTTTATTGAT
ACCACCATCACCATTAAGATCTCACGCCATCAGAATTACACTGATCGTGC
CGGAGATGGCATGACGTTCATTTTTGCAAGCGATAAAAACGGTCCATCAG
CAAAGGGCGTCGGCGAATATCTTGGACTGCAGTCTTCACCAGGCGATAAA
TTTCCTCCATTAGCCGTGGAGCTGGACACATGCCTGAACAAGAACCTGAA
TGATCCAGATGATAACCATATTGGCATCGACATAAACGGAATCGAATCAA
ATCCAGTTAATAGTCTGCTTGACGTTGATCTCAAAAGTGGACGAGCAATC
CAGGTTCGAATTTATTACAATCCAGACTTTGGACAACTCTCTGTTTATGC
GGCATATTCGGGGGAAACACTTGTGAAGGTGGTTGAAAAACCCATTAACC
TGTCAGATATAATTCCAACGCCCGTCTATGTTGGATTCACAGCAGCTACG
GGGGACTTTTTAGAAAAGCATGAGGTTATAAATTGGACCTTCAACTCGTT
CCCAGTGCCCGCTTCTCTCAGGGAGAAAAACTGGTGATGCCATATAATTC
TAANCCGTCCCTGAAAAACATGTCACATAATTATAATCATAATAATTATA
TCACCAATAAGTGACATGGCTCTTGCATAAAATATTGAATAAATGATAGC
GCGACTAGGATTATACTGNTTGCTTGCTGNCTGAAAGTACTGAAT
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