EY660071

Overview
NameEY660071
Unique NameEY660071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY660071 vs. ExPASy Swiss-Prot
Match: Y1480_ARATH (Uncharacterized protein At1g18480 OS=Arabidopsis thaliana GN=At1g18480 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 8.665e-78
Identity = 137/209 (65.55%), Postives = 169/209 (80.86%), Query Frame = 2 
Query:   14 F*IATEMGLKEFEDWANWYCICTQMKSLCVGLEKPKDFFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDSVFVHGGLLKQHVEYGLERINREVRDWINGLM-GKSAPGYCKGRHAVVWLRKFSDE-EKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAACDNRAIRIDVGLXRRCYDGLPEALEINGNS 634
            F   T+ GL+EF+ WA+WYC+  +MK+LC GL+KPKD + GIP++F  M  +   G+RARIAALRPDGPIA+RFL++N TV VVGDSVFVHGGLL +H+EYGLERIN EVR WING   G+ AP YC+G ++VVWLRKFS+E   KCDC+ALEHAL+TIPGVKRMIMGHTIQ+ GIN  C+++AIRIDVG+ + C DGLPE LEI  +S
Sbjct:  142 FRYVTKKGLEEFQIWADWYCLGNKMKTLCSGLDKPKDPYEGIPMSFPRMRADCFEGIRARIAALRPDGPIAKRFLTKNQTVAVVGDSVFVHGGLLAEHIEYGLERINEEVRGWINGFKGGRYAPAYCRGGNSVVWLRKFSEEMAHKCDCAALEHALSTIPGVKRMIMGHTIQDAGINGVCNDKAIRIDVGMSKGCADGLPEVLEIRRDS 350

HSP 2 Score: 23.483 bits (49), Expect = 8.665e-78
Identity = 9/21 (42.86%), Postives = 14/21 (66.67%), Query Frame = 3 
Query:  645 VLTANPLDPNKNQLHLAPDTK 707
            ++T+NPL       H+APD+K
Sbjct:  354 IVTSNPLYKENLYSHVAPDSK 374
The following BLAST results are available for this feature:
BLAST of EY660071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1480_ARATH8.665e-7865.55Uncharacterized protein At1g18480 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-B12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660071 ID=EY660071; Name=EY660071; organism=Citrus sinensis; type=EST; length=872bp
CCACGCGTCCGGATTTTAGATCGCTACTGAAATGGGTTTAAAAGAGTTTG
AGGATTGGGCTAATTGGTATTGTATTTGCACCCAAATGAAATCTTTATGT
GTAGGGTTAGAAAAGCCGAAAGATTTCTTTAGTGGGATTCCTTTAGCTTT
TAAGAGTATGGCTAAAGAGTATCATAATGGTGTTAGGGCTAGAATTGCTG
CATTGAGACCGGATGGACCGATTGCAAGGCGGTTTTTGTCTGAGAATACA
ACCGTGCTAGTAGTTGGGGACTCTGTTTTTGTTCATGGAGGGTTGTTGAA
GCAACACGTAGAATATGGTTTGGAGAGGATTAATCGAGAAGTGAGGGACT
GGATCAATGGGTTAATGGGGAAGTCTGCGCCAGGATATTGTAAAGGGAGG
CATGCTGTTGTTTGGTTGAGGAAGTTTTCGGATGAGGAGAAGAAATGTGA
TTGTTCAGCTCTTGAACATGCTCTTGCGACTATTCCTGGCGTGAAGAGAA
TGATTATGGGTCATACGATACAGGAAAAGGGGATAAATGCTGCTTGTGAT
AATAGAGCAATAAGAATCGATGTGGGCTTGTNCAGGCGATGCTATGATGG
GTTGCCTGAGGCCCTGGAGATCAATGGAAATTCTGAGTTGTTTGGTTCTG
ACAGCGAATCCCTTGGATCCGAACAAGAACCAACTTCATTTGGCTCCCGA
TACCAAGGAAGGGCTCGGTTTGTTGCTCCCAGATTTACCACCACAAACAG
TGGCAGGGAAAGCCTAATGTGTTTAACCATATCCCTTTGCAAAAGTACTC
CACGTCTCTACTGAAAATATAATTCCTTCCACCGCCCCCTACAGCATAAA
CCCTTTGATGAAAACCTGATCC
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