EY660058

Overview
NameEY660058
Unique NameEY660058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig444 contig Csv1_Contig444:24..788. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.727e-51
Identity = 101/155 (65.16%), Postives = 121/155 (78.06%), Query Frame = 1
Query:  103 GLKAGATPARVV--GSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            GLKAGA+ +  V  G++ K +A+ V +L++KA+LKDVG                  +EVLLGGDDGSLAF+P +FSVS+GEKI FKNNAGFPHN VFDEDEIP+GVD SKISMS EDLLN  GETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN
Sbjct:   16 GLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATAVSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.176e-50
Identity = 101/153 (66.01%), Postives = 113/153 (73.86%), Query Frame = 1
Query:  103 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            GLKAG+     V ++ K SAS +P+LSIKA++KDVG                  I+VLLG DDGSLAFVPS FS+S GEKIVFKNNAGFPHN VFDED IPSGVD SKISMS EDLLN  GET+ V L+ KG YSFYCSPHQGAGMVG+VTVN
Sbjct:   16 GLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAASAMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.411e-49
Identity = 102/157 (64.97%), Postives = 117/157 (74.52%), Query Frame = 1
Query:  103 GLKAGA----TPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            GLKA      T A+++ +T     +AVP+LS+KA+LK+VG                  +EVLLGG DGSLAF+P  FSV+SGE+IVFKNNAGFPHN VFDEDEIPSGVD +KISMS EDLLN PGETY VTLTEKGTY FYCSPHQGAGMVG+VTVN
Sbjct:   17 GLKASGSIKPTTAKIIPTT-----TAVPRLSVKASLKNVGAAVVATAAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 4.538e-48
Identity = 96/153 (62.75%), Postives = 113/153 (73.86%), Query Frame = 1
Query:  103 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            GLKA +     V ++ K SAS +P+LSIKA+LK+VG                  ++VLLG DDGSLAFVPS FSV +GEKIVFKNNAGFPHN +FDED +PSGVDVSKISMS EDLLN  GET+ V L++KG Y+FYCSPHQGAGMVG+V VN
Sbjct:   16 GLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAASAMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVDVSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_SILPR (Plastocyanin, chloroplastic OS=Silene pratensis GN=PETE PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.252e-46
Identity = 96/153 (62.75%), Postives = 110/153 (71.90%), Query Frame = 1
Query:  103 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            GLKA +T      +T+K  A A P++SIKA+LKDVG                   EVLLG  DG LAFVPS  S++SGEKI FKNNAGFPHN VFDEDE+P+GVDV+KISM  EDLLN PGE Y+VTLTEKGTY FYC+PH GAGMVG+VTVN
Sbjct:   17 GLKASSTTR---AATVKV-AVATPRMSIKASLKDVGVVVAATAAAGILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 5.547e-46
Identity = 93/153 (60.78%), Postives = 111/153 (72.55%), Query Frame = 1
Query:  103 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            GLKA    +      ++ +A A PKL++K++LK+ G                  IEVLLGG DGSLAF+P+ FS++ GEKIVFKNNAG+PHN VFDEDEIPSGVDV+KISM  +DLLNG GETY V LTE GTYSFYC+PHQGAGMVG+VTVN
Sbjct:   16 GLKASTIKSSAT-VRIQTAAVASPKLTVKSSLKNFGVAAVAAAASIALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDVAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_PEA (Plastocyanin, chloroplastic OS=Pisum sativum GN=PETE PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.596e-45
Identity = 93/153 (60.78%), Postives = 103/153 (67.32%), Query Frame = 1
Query:  103 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            GLK  A       + +  S S  P+L ++A+LKD G                  +EVLLG  DG LAFVPSS  VS+GE IVFKNNAGFPHN VFDEDEIP+GVD SKISM  EDLLN PGETY+V L  KGTY FYCSPHQGAGMVGQVTVN
Sbjct:   16 GLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFGVALVATAASAVLASNALAVEVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIPAGVDASKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 168          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS2_TOBAC (Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.331e-44
Identity = 84/99 (84.85%), Postives = 92/99 (92.93%), Query Frame = 1
Query:  265 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 561
            IEVLLG DDG LAFVP +FSVS+GEKI FKNNAGFPHN VFDEDEIP+GVD SKISMS EDLLNGPGETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN
Sbjct:    1 IEVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNGPGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 99          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS1_ARATH (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana GN=PETE PE=2 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 2.331e-44
Identity = 94/155 (60.65%), Postives = 107/155 (69.03%), Query Frame = 1
Query:  103 GLKAGATPARVVGSTMKASASAV---PKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 558
            GLK   +      ST+  S SA    PKL++K++LKD G                  +EVLLG DDGSLAFVPS F+V+ GEKIVFKNNAGFPHN VFDEDEIPSGVD SKISM    LLNG GETY VTLTE G+Y FYC+PHQGAGMVG++TV
Sbjct:   16 GLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170          
BLAST of EY660058 vs. ExPASy Swiss-Prot
Match: PLAS_RUMOB (Plastocyanin OS=Rumex obtusifolius GN=PETE PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.975e-44
Identity = 83/98 (84.69%), Postives = 92/98 (93.88%), Query Frame = 1
Query:  265 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNFVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 558
            IE+ LGGDDG+LAFVP SF+V++GEKIVFKNNAGFPHN VFDEDE+P+GVD SKISMS EDLLN PGETYAVTL+EKGTYSFYCSPHQGAGMVG+VTV
Sbjct:    1 IEIKLGGDDGALAFVPGSFTVAAGEKIVFKNNAGFPHNIVFDEDEVPAGVDASKISMSEEDLLNAPGETYAVTLSEKGTYSFYCSPHQGAGMVGKVTV 98          
The following BLAST results are available for this feature:
BLAST of EY660058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
PLAS_SOLLC5.727e-5165.16Plastocyanin, chloroplastic OS=Solanum lycopersicu... [more]
PLAS1_POPNI2.176e-5066.01Plastocyanin A, chloroplastic OS=Populus nigra GN=... [more]
PLAS_SPIOL1.411e-4964.97Plastocyanin, chloroplastic OS=Spinacia oleracea G... [more]
PLAS2_POPNI4.538e-4862.75Plastocyanin B, chloroplastic OS=Populus nigra GN=... [more]
PLAS_SILPR3.252e-4662.75Plastocyanin, chloroplastic OS=Silene pratensis GN... [more]
PLAS2_ARATH5.547e-4660.78Plastocyanin major isoform, chloroplastic OS=Arabi... [more]
PLAS_PEA3.596e-4560.78Plastocyanin, chloroplastic OS=Pisum sativum GN=PE... [more]
PLAS2_TOBAC2.331e-4484.85Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1 SV=1[more]
PLAS1_ARATH2.331e-4460.65Plastocyanin minor isoform, chloroplastic OS=Arabi... [more]
PLAS_RUMOB3.975e-4484.69Plastocyanin OS=Rumex obtusifolius GN=PETE PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-018-A11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660058 ID=EY660058; Name=EY660058; organism=Citrus sinensis; type=EST; length=765bp
TTCCTCGACCCACGCGTCCGCAAAAAGAATTACACCAGAACCCCATTTAC
AGTTACAATGGCTACTGTCACCTCTGCAGCTGTCACCGTCCCAACTTTCA
CCGGCCTTAAAGCCGGTGCAACACCAGCCAGAGTTGTTGGTTCCACCATG
AAGGCCTCAGCCTCTGCTGTCCCAAAGCTCAGCATCAAGGCCACACTCAA
AGATGTTGGAGTGGCCGTTGCGGCCACAGCTGCCAGCGCAATGCTTGCTA
GCAATGCCATGGCCATTGAGGTTTTGCTTGGTGGTGATGATGGGTCCTTG
GCTTTTGTTCCAAGCTCTTTCTCTGTCAGCTCCGGTGAAAAGATTGTGTT
CAAGAACAATGCTGGGTTCCCACACAACTTTGTTTTCGATGAAGATGAGA
TTCCGAGTGGTGTTGATGTTTCAAAAATCTCCATGTCTACAGAAGACCTT
CTCAATGGTCCTGGAGAGACTTATGCTGTTACTCTGACTGAAAAAGGCAC
TTACTCTTTCTACTGTTCCCCTCACCAAGGAGCTGGCATGGTTGGACAAG
TGACTGTTAATTAAGTTCACATTCAGACTTTGTTTGCCTCATCTCATTGG
TTATCGTTCTCTTCTTTTTGCATTTTATGAGTATCATACATATTTTCATT
TGGTGAGAGAGAATGTTATGTGGTGAGACACTTCAACCAAGCCAATAAAC
CTCTGTATTTTCCATTTATTTCAAATGCAGAATTGTGATGTAACTAATTA
AAAAAAAAAAAAAAA
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