EY660039

Overview
NameEY660039
Unique NameEY660039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY660039 vs. ExPASy Swiss-Prot
Match: GLTR_ARATH (Uncharacterized glycosyltransferase At3g02350 OS=Arabidopsis thaliana GN=At3g02350 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.042e-44
Identity = 92/137 (67.15%), Postives = 108/137 (78.83%), Query Frame = 3 
Query:  288 SLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPGLPSSGNAYVQRTFLALKSDPLKTRLDLIQKQANDHITLVNTYAAYARKLKLDISRQLRMFDDLAHNFSDLLMKPGYKSALFESKGAVDEDVLRAFXKEVR 698
            S FSYRIF+SA+FS LFLAT SV+L S     H D  LPS GNAY+QRTFLAL+SDPLKTRLDLI KQA DH+TLVN YAAYARKLKLD S+QL++F+DLA NFSDL  KPG KSA+ ++  A++ED  R   KEV+
Sbjct:   22 SFFSYRIFISALFSFLFLATFSVVLNSSRHQPHQDHTLPSMGNAYMQRTFLALQSDPLKTRLDLIHKQAIDHLTLVNAYAAYARKLKLDASKQLKLFEDLAINFSDLQSKPGLKSAVSDNGNALEEDSFRQLEKEVK 158
[Close]
BLAST of EY660039 vs. ExPASy Swiss-Prot
Match: QUA1_ARATH (Glycosyltransferase QUASIMODO1 OS=Arabidopsis thaliana GN=QUA1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.619e-21
Identity = 67/141 (47.52%), Postives = 92/141 (65.25%), Query Frame = 3 
Query:  303 RIFVSAMFSL--LFLATLSVILTSHPSTSHHD--PGLPSSGNAYVQRTFLALKSDPLKTRLDLIQKQANDHITLVNTYAAYARKLKLDISRQLRMFDDLAHNFSDLLMKPGYKSALFESKGA-VDEDVLRAFXKEVRIR*K 710
            RI ++A  S   LFL TLS    S  + S     PG+  S     +R+ L +KSDPLK RL  I+KQA+DH +L   YA+YARKLKL+ S+ +R+F DL+ N++DL+ KP Y+ AL++S GA ++E VLR F KEV+ R K
Sbjct:   20 RITLTAFASTIALFLFTLSFFFASDSNDSPDLLLPGVEYSNGVGSRRSMLDIKSDPLKPRLIQIRKQADDHRSLALAYASYARKLKLENSKLVRIFADLSRNYTDLINKPTYR-ALYDSDGASIEESVLRQFEKEVKERIK 159
The following BLAST results are available for this feature:
BLAST of EY660039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GLTR_ARATH1.042e-4467.15Uncharacterized glycosyltransferase At3g02350 OS=A... [more]
QUA1_ARATH1.619e-2147.52Glycosyltransferase QUASIMODO1 OS=Arabidopsis thal... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660039 ID=EY660039; Name=EY660039; organism=Citrus sinensis; type=EST; length=905bp
TCCATCAACCCACGCGTCCGGTCAAGTGTTAACTCTGTGTACTCCATCTG
AACTCCGATCTGCTCCTTCTTTATTAATAATATTCGACTCCTCAGAAAAA
GCAATTTAAAAATTAAAAAAAAAAAAAATCTTTGAATCATTGAATCAAAA
CAACGACAGCAGCGATTTAAATCTCTCTTCTTCAATACTTCAGATCTCAA
ATTAAGCAATCAGATCGCTTAAACCTCAAAATGGCGGTGGCCATTCGCGG
AGGCCGCGGCGGAACCGCTGTAGGTCCCGGTCTACGCAGCTTATTCTCAT
ACCGCATCTTCGTGTCCGCCATGTTCTCTCTCCTCTTCCTCGCCACTCTC
TCCGTCATCCTCACCTCTCACCCCTCCACTTCTCATCACGACCCCGGTTT
GCCCAGTAGTGGCAATGCGTATGTTCAAAGGACGTTTTTGGCGTTGAAGT
CTGATCCGCTTAAGACTAGATTAGATTTGATACAGAAACAAGCAAATGAT
CATATCACTTTAGTGAATACTTATGCTGCTTATGCTAGGAAGTTGAAGCT
AGATATATCTAGGCAGTTGAGGATGTTTGATGATCTGGCTCACAACTTTT
CGGATCTTTTGATGAAACCTGGTTATAAGTCGGCCTTGTTTGAGTCAAAG
GGTGCCGTGGATGAGGATGTGTTGAGGGCATTCNAGAAGGAAGTGAGGAT
AAGGTGAAAGTGCANGATTGATGATTGGTGAGGCAAAGAGAGTACGACAA
TCAGTGAAGATCAGAAGTGAAAGAACGATCTTGCAGTTATGGAGTTGTGA
TAAGGCGAAAAAGACGGGGATTGCTAGCTGATTCCTGCTAATCGGTCTAA
AGTTGCATGTTTGCATGAAACTGGGGAGGAAGATTCCCCCCAACAGATAA
GGGGA
back to top