EY660037

Overview
NameEY660037
Unique NameEY660037
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660037 vs. ExPASy Swiss-Prot
Match: PLA23_ORYSJ (Phospholipase A2 homolog 3 OS=Oryza sativa subsp. japonica GN=PLA2-III PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.798e-38
Identity = 76/145 (52.41%), Postives = 96/145 (66.21%), Query Frame = 2
Query:  176 AIAHVFIFLILSVSVHALNIGVQSAYSAISVSKDCSRKCESDFCSVPPFLRYGKYCGLLYSGCPGEKPCDGLDACCMKHDACVQAKNNDYLSQECSKNFIDCMEKFKRAGGRSFKGNTCGXXXXXXXXXXXXXAALLAGRGLHKP 610
            A A + +F +++    ALNIG+QSA    S +  CSR CESD C+ PP LRYGKYCG+LYSGCPGE+PCD LDACCM HD CVQAK NDYLS  C++  ++C+ +  R G  +F+GN C              AA++AGR LHKP
Sbjct:   21 AAAALLLFAVVAPPAAALNIGLQSAGDGASKAGLCSRTCESDHCTTPPLLRYGKYCGILYSGCPGEQPCDELDACCMHHDNCVQAK-NDYLSTACNEELLECLARL-REGSSTFQGNKCMIDEVIDVISLVIEAAVVAGRLLHKP 163          
BLAST of EY660037 vs. ExPASy Swiss-Prot
Match: PLA22_ORYSJ (Probable phospholipase A2 homolog 2 OS=Oryza sativa subsp. japonica GN=PLA2-II PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.916e-32
Identity = 69/148 (46.62%), Postives = 88/148 (59.46%), Query Frame = 2
Query:  167 LKLAI-AHVFIFLILSVSVHALNIGVQSAYSAISVSKDCSRKCESDFCSVPPFLRYGKYCGLLYSGCPGEKPCDGLDACCMKHDACVQAKNNDYLSQECSKNFIDCMEKFKRAGGRSFKGNTCGXXXXXXXXXXXXXAALLAGRGLHK 607
            LKLA    V + L+L  +   LNIG     S  +  + CSR CES FC++ P LRYGKYCG+LYSGCPGE+PCD LDACCM HD CV   N+DYL+  C++N + C++   R  G +F GN C               A+ AG+ LHK
Sbjct:    5 LKLAPRCSVLLLLLLVTASRGLNIG-DLLGSTPAKDQGCSRTCESQFCTIAPLLRYGKYCGILYSGCPGERPCDALDACCMVHDHCVDTHNDDYLNTMCNENLLSCID---RVSGATFPGNKCNVGQTASVIRGVIETAVFAGKILHK 148          
BLAST of EY660037 vs. ExPASy Swiss-Prot
Match: PLA21_ORYSJ (Probable phospholipase A2 homolog 1 OS=Oryza sativa subsp. japonica GN=PLA2-I PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.314e-16
Identity = 40/80 (50.00%), Postives = 50/80 (62.50%), Query Frame = 2
Query:  278 CSRKCESDFCSVPPFLRYGKYCGLLYSGCPGEKPCDGLDACCMKHDACVQAKNNDYLSQECSKNFIDCMEKFKRAGGRSF 517
            CSR C +  C     +RYGKYCG+ +SGC GE+PCD LDACC  HD CV  K    +S +C + F +CM K K+AG   F
Sbjct:   29 CSRSCAALNCDSVG-IRYGKYCGVGWSGCDGEEPCDDLDACCRDHDHCVDKKG--LMSVKCHEKFKNCMRKVKKAGKIGF 105          
The following BLAST results are available for this feature:
BLAST of EY660037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PLA23_ORYSJ6.798e-3852.41Phospholipase A2 homolog 3 OS=Oryza sativa subsp. ... [more]
PLA22_ORYSJ1.916e-3246.62Probable phospholipase A2 homolog 2 OS=Oryza sativ... [more]
PLA21_ORYSJ7.314e-1650.00Probable phospholipase A2 homolog 1 OS=Oryza sativ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-H02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660037 ID=EY660037; Name=EY660037; organism=Citrus sinensis; type=EST; length=739bp
TCGATAGACCCAGGCGTCCGCAACACCTTTTTCTTTATAAGACCTTGTGT
CTTCCTTTTTCTCTATAAATCAGAGCTTTTAAGCAAAACCACGCTTCATT
TCCTCTATTCTTCTTTTGCCTAAACTCTACTAATTTTAACAAATGGTGAT
GACACACCAACATTCTTTGAAGTTGGCCATAGCCCATGTTTTCATTTTTC
TAATCCTTTCAGTTTCTGTTCATGCTCTCAACATTGGAGTTCAATCAGCA
TATTCTGCCATCTCTGTGAGCAAAGATTGCAGCAGAAAATGTGAATCTGA
CTTCTGTTCAGTGCCCCCATTTCTGAGATATGGCAAGTACTGTGGGCTGC
TGTACAGTGGATGCCCTGGAGAGAAGCCTTGTGATGGCCTTGATGCTTGC
TGTATGAAGCATGATGCCTGCGTCCAAGCCAAGAACAATGACTATTTGAG
CCAAGAATGCAGCAAAAACTTCATCGATTGCATGGAGAAATTCAAGAGAG
CAGGAGGGCGTTCATTCAAAGGAAACACATGTGGAGTTGAAGAAGTTATT
GATGTAATCATTGTTGTTATGGAAGCTGCTTTGCTTGCTGGAAGGGGTCT
TCATAAACCATAGCATCCTCATAAAAAAGAAAGAGAAAGGGTTTGTTTCA
TCAATAATGCTTTTTAATGATTAGTGCCCATTTGTTTTACTTAATAGGAC
TTTTTGTCATTTTGTTTTCAAAAAAAAAAAAAAAAAAAA
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