EY660015

Overview
NameEY660015
Unique NameEY660015
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY660015_ssr31 microsatellite EY660015_ssr31:31..45. BLAST: Citrus ESTs to Prunus persica proteins V1
EY660015_ssr70 microsatellite EY660015_ssr70:70..81. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1968 contig Csv1_Contig1968:403..1319. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660015 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.250e-56
Identity = 100/151 (66.23%), Postives = 120/151 (79.47%), Query Frame = 1
Query:  277 KLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEXMPRGSLENHLFRKSL---PLPWXIRMKIALGAAKGLAFL 720
            + E E+  +  L+ F+F +LK ATRNFRP+S+LGEGGFGCVFKGWI+E      +PGTGL +AVK LN DG QGH+EWLAEVN+LG   H +LVKLIGYC+ED+ RLLVYE MPRGSLENHLFR+ L   PL W +R+K+ALGAAKGLAFL
Sbjct:   42 RTEGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFL 192          

HSP 2 Score: 28.8758 bits (63), Expect = 3.250e-56
Identity = 18/38 (47.37%), Postives = 20/38 (52.63%), Query Frame = 2
Query:  710 LLFFRGSRRPVIYPEFKTSTFF*CRLY-AKLSDLGLPR 820
            L F   S   VIY +FKTS       Y AKLSD GL +
Sbjct:  189 LAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAK 226          
BLAST of EY660015 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.987e-55
Identity = 99/155 (63.87%), Postives = 123/155 (79.35%), Query Frame = 1
Query:  277 KLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEXMPRGSLENHLFRKSL---PLPWXIRMKIALGAAKGLAFLPRKP 732
            K E E+  ++ ++ FTFN+LKLATRNFRP+S++GEGGFGCVFKGW++E+   P KPGTGL +AVK LN +G QGH+EWL E+N+LG L H NLVKLIGYC+ED+ RLLVYE M +GSLENHLFR+     PLPW +R+ +AL AAKGLAFL   P
Sbjct:   41 KTEGEILSSTPVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDP 195          
BLAST of EY660015 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 6.009e-55
Identity = 100/151 (66.23%), Postives = 118/151 (78.15%), Query Frame = 1
Query:  277 KLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEXMPRGSLENHLFRKS---LPLPWXIRMKIALGAAKGLAFL 720
            + E E+  +  L+ FTF +LK ATRNFRP+S+LGEGGFG VFKGWI+E      KPGTG+ +AVK LN DG QGH+EWLAEVN+LG   H NLVKLIGYC+ED+ RLLVYE MPRGSLENHLFR+     PL W +R+K+ALGAAKGLAFL
Sbjct:   43 RTEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFL 193          

HSP 2 Score: 28.1054 bits (61), Expect = 6.009e-55
Identity = 17/38 (44.74%), Postives = 20/38 (52.63%), Query Frame = 2
Query:  710 LLFFRGSRRPVIYPEFKTSTFF*CRLY-AKLSDLGLPR 820
            L F   +   VIY +FKTS       Y AKLSD GL +
Sbjct:  190 LAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAK 227          
BLAST of EY660015 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 4.036e-52
Identity = 95/151 (62.91%), Postives = 121/151 (80.13%), Query Frame = 1
Query:  277 KLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEXMPRGSLENHLFRKSL---PLPWXIRMKIALGAAKGLAFL 720
            + E E+   + L+ F+ ++LK ATRNFRP+S++GEGGFGCVFKGWI+E+  AP KPGTG+ +AVK LN +G QGH+EWLAE+N+LG L H NLVKLIGYC+E++ RLLVYE M RGSLENHLFR+     PL W  R+++ALGAA+GLAFL
Sbjct:   42 RTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFL 192          
BLAST of EY660015 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.463e-51
Identity = 97/149 (65.10%), Postives = 116/149 (77.85%), Query Frame = 1
Query:  277 KLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEXMPRGSLENHLFRK-SLPLPWXIRMKIALGAAKGLAFL 720
            + E E+  +  L+ FTFN+LK ATRNFRP+SLLGEGGFG VFKGWI+       KPG+G+ VAVK L  +G QGHKEWL EVN+LG L H NLVKL+GYC+E + RLLVYE MP+GSLENHLFR+ + PL W IRMK+A+GAAKGL FL
Sbjct:   57 RTEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTFL 205          
BLAST of EY660015 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.696e-50
Identity = 94/156 (60.26%), Postives = 119/156 (76.28%), Query Frame = 1
Query:  277 KLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEXMPRGSLENHLF----RKSLPLPWXIRMKIALGAAKGLAFLPRKP 732
            K E E+  ++ ++ F+FN+LKLATRNFR +S++GEGGFGCVF+GW++E    P K  +GL +AVK LN DG QGH+EWL E+N+LG L H NLVKLIGYC+ED+QRLLVYE M +GSLENHLF    +   PL W +R+K+AL AAKGLAFL   P
Sbjct:   35 KTEGEILSSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDP 190          
BLAST of EY660015 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.416e-50
Identity = 93/149 (62.42%), Postives = 115/149 (77.18%), Query Frame = 1
Query:  277 KLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEXMPRGSLENHLFRK-SLPLPWXIRMKIALGAAKGLAFL 720
            + E E+  +  L+ FTFN+LK AT+NFR ++LLGEGGFGCVFKGWI++      +PG+G+ VAVK L  +G QGHKEWL EVN+LG L H NLV L+GYC E + RLLVYE MP+GSLENHLFR+ + PL W IRMK+A+GAAKGL FL
Sbjct:   60 RTEGEILSSPNLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFL 208          
BLAST of EY660015 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 4.378e-46
Identity = 81/144 (56.25%), Postives = 111/144 (77.08%), Query Frame = 1
Query:  289 ELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEXMPRGSLENHLFRKSLPLPWXIRMKIALGAAKGLAFL 720
            +L  +  L+ + F DLK AT+NF+P+S+LG+GGFG V++GW++    AP + G+G+ VA+K LN + +QG  EW +EVNFLG L H NLVKL+GYC ED + LLVYE MP+GSLE+HLFR++ P PW +R+KI +GAA+GLAFL
Sbjct:   64 KLLESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRNDPFPWDLRIKIVIGAARGLAFL 207          

HSP 2 Score: 28.4906 bits (62), Expect = 4.378e-46
Identity = 18/40 (45.00%), Postives = 21/40 (52.50%), Query Frame = 2
Query:  704 RVLLFFRGSRRPVIYPEFKTSTFF*CRLY-AKLSDLGLPR 820
            R L F    +R VIY +FK S       Y AKLSD GL +
Sbjct:  202 RGLAFLHSLQREVIYRDFKASNILLDSNYDAKLSDFGLAK 241          
BLAST of EY660015 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.595e-32
Identity = 78/142 (54.93%), Postives = 97/142 (68.31%), Query Frame = 1
Query:  310 LRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD----QRLLVYEXMPRGSLENHLF-RKSLPLPWXIRMKIALGAAKGLAFL 720
            LR F++ +L  AT  F  + ++GEGGFG V+KG I  NG +   P   L VA+K LN  GLQGHK+WLAEV FLG + H N+VKLIGYC ED     +RLLVYE M   SLE+HLF R+S  LPW  R++I LGAA+GL +L
Sbjct:   71 LRVFSYEELSKATYVFSRKLVIGEGGFGIVYKGKILSNGDSSDPP---LVVAIKKLNRQGLQGHKQWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRSHTLPWKKRLEIMLGAAEGLTYL 209          
BLAST of EY660015 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.130e-31
Identity = 78/142 (54.93%), Postives = 92/142 (64.79%), Query Frame = 1
Query:  319 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEXMPRGSLENHLFRKSLP-----LPWXIRMKIALGAAKGLAFLPRK 729
            F F +L  AT NF P++ LGEGGFG V+KG ++          TG  VAVK L+ +GLQG++E+L EV  L  L H NLV LIGYC + DQRLLVYE MP GSLE+HL    LP     L W +RMKIA GAAKGL FL  K
Sbjct:   74 FAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDS---------TGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHL--HDLPPDKEALDWNMRMKIAAGAAKGLEFLHDK 204          
The following BLAST results are available for this feature:
BLAST of EY660015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
APK1A_ARATH3.250e-5666.23Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
BIK1_ARATH2.987e-5563.87Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
APK1B_ARATH6.009e-5566.23Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
NAK_ARATH4.036e-5262.91Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK2B_ARATH4.463e-5165.10Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y3545_ARATH1.696e-5060.26Probable receptor-like protein kinase At3g55450 OS... [more]
APK2A_ARATH8.416e-5062.42Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
CX32_ARATH4.378e-4656.25Probable serine/threonine-protein kinase Cx32, chl... [more]
Y5707_ARATH1.595e-3254.93Probable receptor-like protein kinase At5g47070 OS... [more]
PBS1_ARATH5.130e-3154.93Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660015 ID=EY660015; Name=EY660015; organism=Citrus sinensis; type=EST; length=917bp
TAATAGAGGCGTNCGAGCAAATCATTGGCAAAGAAGAAGAAGAAGAAAGT
TGAAGATGAAGTTGAAGTTGAAGAAGAAGAAGATACTCCGTGTTGGGTCA
AGTTTAGATTTTTTGGAAGCTGCATTTCTTCAAGATCCAAAGTTGATAGC
TCCGTGAGTGGCACCAGTACCCATTATGAAAGTAAATCTACAAATGATAC
AAGTAGGGACCAACCGGCAGCTGCTGTTATCTCATCTACAACCACTAGTA
ATGCAGAAAGTAATTCCTCCACTTCTAAGCTTGAAGAAGAGCTAAAAGTT
GCTTCTCGGCTACGGAAATTCACATTTAATGATCTTAAGTTGGCGACACG
AAATTTTAGGCCTGAGAGTCTTCTTGGAGAAGGTGGTTTTGGTTGTGTTT
TCAAGGGCTGGATAGAAGAAAATGGAACTGCTCCAGTTAAACCTGGCACG
GGACTTACTGTTGCAGTAAAAACCCTTAACCATGATGGTCTTCAGGGTCA
CAAGGAATGGCTGGCGGAAGTGAATTTTCTTGGTGATCTTGTTCATCTTA
ACTTGGTTAAATTAATCGGTTATTGCATTGAAGATGATCAAAGGCTGCTT
GTCTATGAGNTTATGCCTCGAGGAAGTTTGGAGAACCACCTTTTCAGAAA
GTCCTTGCCTCTTCCATGGNCCATAAGAATGAAAATTGCACTAGGTGCTG
CCAAGGGTCTTGCTTTTCTTCCGAGGAAGCCGAAGGCCGGTGATTTATCC
GGAATTCAAAACCTCAACATTCTTTTGATGCAGATTATATGCCAAGCTCT
CGGACCTCGGACTGCCAAGATGGGCCTGAGGGGTTAAACCATGTTCTCCC
CCGGGGTGGGGACTGTGCCTTGCCGCCCCGAATTGTATGACCGGCCTTTT
ACTCAAGGAGGATGGAA
back to top