EY660014

Overview
NameEY660014
Unique NameEY660014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: YI01_SCHPO (Putative amidase C869.01 OS=Schizosaccharomyces pombe GN=SPAC869.01 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.129e-33
Identity = 78/159 (49.06%), Postives = 108/159 (67.92%), Query Frame = 2
Query:  248 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPDALSQADEADCERSVKAPGSLPG-LHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWANFRSSMHPXGFCARVXKEEIICSISRSLGG 721
            + +ATI  LQ   +   LTS  +V  YL    ++NP +NG++++NPD L+ A E D ER   A G + G LHGIP ++KDN ATKDKM+TTAGSYALLGS+VPRDA VV +L EAGA++ G A+LSEWA+ RS+ +  G+ AR  +     +++ + GG
Sbjct:   66 LEDATIDQLQNYMENGILTSTDIVHCYLDRYLQVNPYVNGILQLNPDVLTIASELDDER---ANGIIRGPLHGIPFIVKDNFATKDKMDTTAGSYALLGSIVPRDAYVVKQLREAGAVLFGHATLSEWADMRSNDYSEGYSARGGQSRCPFNLTVNPGG 221          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_BIFLI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=gatA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.088e-15
Identity = 55/125 (44.00%), Postives = 73/125 (58.40%), Query Frame = 2
Query:  281 AFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWANFRSSMH 652
            A K+  +TSR+LVE +L  I    P +   ++V+ D AL QAD  D  +S +   +LP L G+PI +KD I TK  + TTA S  L G V P DA V+ KL  AG  ILGK +L E+A   S+ H
Sbjct:   19 AIKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFDA-KSAEDKAALPELAGVPIAIKDMIVTKG-IETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNLDEFAQGSSTEH 141          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_BIFLO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium longum GN=gatA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.033e-15
Identity = 55/125 (44.00%), Postives = 73/125 (58.40%), Query Frame = 2
Query:  281 AFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWANFRSSMH 652
            A K+  +TSR+LVE +L  I    P +   ++V+ D AL QAD  D  +S +   +LP L G+PI +KD I TK  + TTA S  L G V P DA V+ KL  AG  ILGK +L E+A   S+ H
Sbjct:   19 AVKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFDA-KSAEDKAALPELAGVPIAIKDMIVTKG-IETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNLDEFAQGSSTEH 141          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_BIFLD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium longum (strain DJO10A) GN=gatA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.033e-15
Identity = 55/125 (44.00%), Postives = 73/125 (58.40%), Query Frame = 2
Query:  281 AFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWANFRSSMH 652
            A K+  +TSR+LVE +L  I    P +   ++V+ D AL QAD  D  +S +   +LP L G+PI +KD I TK  + TTA S  L G V P DA V+ KL  AG  ILGK +L E+A   S+ H
Sbjct:   19 AVKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFDA-KSAEDKAALPELAGVPIAIKDMIVTKG-IETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNLDEFAQGSSTEH 141          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_PROMT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain NATL2A) GN=gatA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.002e-14
Identity = 48/125 (38.40%), Postives = 76/125 (60.80%), Query Frame = 2
Query:  260 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWA 631
            T +DL+   K  +++S++LV+  +  I+ L+P LN  + VN + ALS+A+  D  + + +   LP L GIPI +KDN+ TK  + TT  S  L   V P ++ V  KL  AGAI++GK ++ E+A
Sbjct:    2 TFEDLRQKLKSGEVSSKELVQEKINRINELDPTLNSFLIVNTELALSKAEHID--KQIASGDHLPPLSGIPIAIKDNLCTKG-IKTTCASKILDNFVPPYESTVTKKLLNAGAIMIGKTNMDEFA 123          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_PROM1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus marinus (strain NATL1A) GN=gatA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.002e-14
Identity = 48/125 (38.40%), Postives = 76/125 (60.80%), Query Frame = 2
Query:  260 TIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWA 631
            T +DL+   K  +++S++LV+  +  I+ L+P LN  + VN + ALS+A+  D  + + +   LP L GIPI +KDN+ TK  + TT  S  L   V P ++ V  KL  AGAI++GK ++ E+A
Sbjct:    2 TFEDLRQKLKSGEVSSKELVQEKINRINELDPTLNSFLIVNTELALSKAEHID--KQIASGDHLPPLSGIPIAIKDNLCTKG-IKTTCASKILDNFVPPYESTVTKKLLNAGAIMIGKTNMDEFA 123          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_GRABC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=gatA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.695e-13
Identity = 57/167 (34.13%), Postives = 85/167 (50.90%), Query Frame = 2
Query:  248 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEW----ANFRSSMHPXGFCARVXKEEIICSISRSLGGRAVA 733
            + + TI + +   +  + ++R+L + +LG I  LNP LN  I V PD A +QA  AD    V A G    L GIP+  KD   ++  + TTAGS  L   V P ++ V  ++   GA+ILGKA+L E+    AN  S+  P     +   ++ +     S GG A A
Sbjct:    4 LTDLTIAEARDGLRAKRFSARELTDAHLGAIEALNPRLNAYITVTPDQARAQAAAAD---RVLASGEAGALTGIPVASKDMFCSEG-IRTTAGSRILENFVPPYESAVTERMLRDGAVILGKANLDEFAMGSANLTSAYGPVENPWKRHDDDAVLVPGGSSGGSAAA 166          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_COXBU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii GN=gatA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.213e-13
Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 2
Query:  248 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWA 631
            + + TI +L+   +   ++S +L + +L  I  +NP LN  I +  + AL+QA  AD      A G    L GIPI  KD   TKD + T+ GS  L   + P DA VV +L +AGAI++GK ++ E+A
Sbjct:    1 MHQKTIAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARL---AKGEATSLTGIPIAQKDIFCTKD-IKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFA 125          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_COXBR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=gatA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.213e-13
Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 2
Query:  248 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWA 631
            + + TI +L+   +   ++S +L + +L  I  +NP LN  I +  + AL+QA  AD      A G    L GIPI  KD   TKD + T+ GS  L   + P DA VV +L +AGAI++GK ++ E+A
Sbjct:    1 MHQKTIAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARL---AKGEATSLTGIPIAQKDIFCTKD-IKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFA 125          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_COXBN (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Coxiella burnetii (strain Dugway 5J108-111) GN=gatA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.213e-13
Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 2
Query:  248 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWA 631
            + + TI +L+   +   ++S +L + +L  I  +NP LN  I +  + AL+QA  AD      A G    L GIPI  KD   TKD + T+ GS  L   + P DA VV +L +AGAI++GK ++ E+A
Sbjct:    1 MHQKTIAELKQDLRDKTISSVELTQHFLDRIKTINPTLNSFISITEEYALTQAKAADARL---AKGEATSLTGIPIAQKDIFCTKD-IKTSCGSKMLDNFIAPYDATVVEQLNKAGAILIGKTNMDEFA 125          
The following BLAST results are available for this feature:
BLAST of EY660014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
YI01_SCHPO1.129e-3349.06Putative amidase C869.01 OS=Schizosaccharomyces po... [more]
GATA_BIFLI3.088e-1544.00Glutamyl-tRNA(Gln) amidotransferase subunit A OS=B... [more]
GATA_BIFLO4.033e-1544.00Glutamyl-tRNA(Gln) amidotransferase subunit A OS=B... [more]
GATA_BIFLD4.033e-1544.00Glutamyl-tRNA(Gln) amidotransferase subunit A OS=B... [more]
GATA_PROMT2.002e-1438.40Glutamyl-tRNA(Gln) amidotransferase subunit A OS=P... [more]
GATA_PROM12.002e-1438.40Glutamyl-tRNA(Gln) amidotransferase subunit A OS=P... [more]
GATA_GRABC1.695e-1334.13Glutamyl-tRNA(Gln) amidotransferase subunit A OS=G... [more]
GATA_COXBU2.213e-1337.21Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_COXBR2.213e-1337.21Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_COXBN2.213e-1337.21Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660014 ID=EY660014; Name=EY660014; organism=Citrus sinensis; type=EST; length=936bp
CCTAAACAGAGGCGTCCGGCAAAAGTGATTACAATATATAAACCCGTTTG
GGGCAGCTGCGCTGCCACCGCGCAGCTGCGCTGCCTCCGCCCAGCTGCTC
CCCAGGCCAATTCTAAAGGAATATTCCCCTAAAATTGTTTAACAAAAGAC
TACCAATAATAATATGTCATTGACCTTTCCTTTCTTTTCACATCTACTCC
TGATTCTTCTAGCCATGTCAACCGATCGATCAGACGATGAATTCCCAATA
AGAGAAGCAACTATCAAGGATCTCCAGCTCGCGTTCAAGCAAAACAAGCT
TACGTCCCGGCAGCTGGTTGAATTTTACCTCGGAGAAATCCACAGGCTCA
ACCCGCTGCTCAACGGAGTCATAGAGGTGAACCCTGATGCGCTATCCCAA
GCTGATGAAGCTGACTGCGAGCGCAGTGTTAAGGCACCAGGTTCACTGCC
CGGTTTACATGGGATTCCTATTCTTCTCAAGGATAACATTGCAACCAAGG
ACAAGATGAACACCACTGCTGGCTCGTATGCTCTGCTCGGCTCAGTCGTG
CCCCGGGATGCTGGTGTGGTGACCAAATTGANGGAAGCTGGTGCCATTAT
TCTGGGAAAGGCTAGCTTGAGTGAGTGGGCTAATTTTAGATCCTCAATGC
ACCCAANTGGTTTTTGTGCTAGGGTGGNCAAGGAAGAAATCATATGTTCT
ATCAGCAGATCCCTGGGGGGTCGAGCAGTGGCTCAGCAATATCGGTAGCA
GCCAACTGGGTTGCAGTGTCCCTGGGAACTGAACTGATGGTCCATTCTCT
CCCCTCCAGGTCCAACTTAGGAGTGGGATCCAACCAACCGTGGGCCTCCC
CAGCGAGCCGGAGCCTCCCTTTACTCCTAAAAGGAACCCGGTGGGGATGG
GGAACCTTGCCCTTCAATTGGATGGTGCACCTTTAA
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