EY660008

Overview
NameEY660008
Unique NameEY660008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.939e-30
Identity = 71/185 (38.38%), Postives = 97/185 (52.43%), Query Frame = 2
Query:  239 NETISDYFQVYQFENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            ++ IS       FE     RN     A GF+ Y +FITAT  +    FGTTG    + KEI AFLA    +T+ G+  A  GP +WG CYN E      YC  S +  +PC PG +Y+GR  I I +NYNYGA G A+  +L ++P+ +  +A +  +   W      Q+ +PSAHD   G  SP
Sbjct:    2 SQNISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFA--AFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQ--WPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALW-FWMTAQQPKPSAHDVITGRWSP 181          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.642e-30
Identity = 66/173 (38.15%), Postives = 91/173 (52.60%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F+     RN P   A GF+ Y +F+ A   +    FGTTG+   + +E+ AFL     +T+ G+  A  GP AWG C+  E +PS +YC  S +Y  PC PG  YYGR  + + WNYNYG  GEALR +L  +P+ +  +  L  +   W    P Q  +PS HD   G   P
Sbjct:   11 FDQMLKHRNNPACPAKGFYTYDAFLAAAKSFP--SFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRY--PCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTP-QAPKPSCHDVLTGRWQP 178          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 1.257e-29
Identity = 63/174 (36.21%), Postives = 91/174 (52.30%), Query Frame = 2
Query:  272 QFENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            QF++    RN     A GF+ Y++FITA   +   GFGTTG    + KE+ AF      +T+ G+  A  GP +WG C+  E +P+  YC+ S   T+PC  G  YYGR  + + WNYNYG  G A+  DL ++P+ +  +A +  +A  W      Q  +PS H    G   P
Sbjct:   94 QFDDMLKHRNDAACPARGFYTYNAFITAAKSFP--GFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSA--TWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIW-FWMTAQPPKPSCHAVIAGQWQP 262          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.641e-29
Identity = 64/174 (36.78%), Postives = 91/174 (52.30%), Query Frame = 2
Query:  272 QFENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            QF++    RN     A GF+ Y +FI A   +   GFGTTG    + KEI AF      +T+ G+  A  GP +WG C+  E +PS +YC  S +  +PC  G  YYGR  + + WNYNYG  G A+ +DL ++P+ +  +  +  +A  W    P Q  +PS H   VG   P
Sbjct:   79 QFDDMLKHRNDNACPARGFYTYDAFINAAKSFP--GFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAE--WPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTP-QSPKPSCHAVIVGQWQP 247          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.144e-29
Identity = 66/174 (37.93%), Postives = 92/174 (52.87%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F      RN     A GF+ Y +FI A   +    F TTG +  + +EI AFLA    +T+ G G  A  GP AWG CYN E++P  SYC     Y  PC PG +Y+GR  + + WNYNYG  G A+  DL ++P+ +  + T+  ++  W    P Q  +PS H+  +G  SP
Sbjct:   61 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP-QSPKPSCHNVIIGAWSP 229          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.144e-29
Identity = 66/174 (37.93%), Postives = 92/174 (52.87%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F      RN     A GF+ Y +FI A   +    F TTG +  + +EI AFLA    +T+ G G  A  GP AWG CYN E++P  SYC     Y  PC PG +Y+GR  + + WNYNYG  G A+  DL ++P+ +  + T+  ++  W    P Q  +PS H+  +G  SP
Sbjct:   83 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP-QSPKPSCHNVIIGAWSP 251          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.370e-28
Identity = 65/177 (36.72%), Postives = 94/177 (53.11%), Query Frame = 2
Query:  272 QFENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSPPG 799
            +F+     RN     A GF+ Y +FI A   +    F TTG    + +E+ AFLA    +T+ G G  A  GP  WG CYN E++P+  YC   +   YPC PG +Y+GR  + + WNYNYG  G A+  DL ++P+ +  + T+  ++  W    P Q  +PS HD  +G  SP G
Sbjct:   80 RFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFP--AFATTGDDATRKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPAD-YCQ--WDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTP-QSPKPSCHDVIIGAWSPSG 250          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.007e-28
Identity = 64/173 (36.99%), Postives = 91/173 (52.60%), Query Frame = 2
Query:  275 FENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            F+     RN       GF+ Y +FI A   +   GFGTTG    K KE+ AFLA    +T+ G+  A  GP AWG C+  E +  + YC       +PC PG +YYGR  I +  NYNYG  G+A++ DL ++P+ +  N T+  +   W    P Q ++PS+HD   G  +P
Sbjct:   89 FDQMLKYRNDGRCAGHGFYTYDAFIAAARSFN--GFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPK---DWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTP-QANKPSSHDVITGRWTP 255          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.536e-27
Identity = 65/185 (35.14%), Postives = 93/185 (50.27%), Query Frame = 2
Query:  245 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSPPG 799
            ++S      QF+     RN     A GF+ Y +F+ A   +   GFGTTG+   + +E+ AFLA    +T+ G+  A  G  AWG C+  E   S  YC  S ++  PC PG  YYGR  I +  NYNYG  G A+  DL ++P+ +  +AT+  +   W      Q  +PS+H    G  SP G
Sbjct:   24 SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFP--GFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQW--PCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIW-FWMTAQPPKPSSHAVIAGQWSPSG 203          
BLAST of EY660008 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.007e-27
Identity = 66/198 (33.33%), Postives = 90/198 (45.45%), Query Frame = 2
Query:  212 CPTWSKFCCNETISD----YFQVYQFENFFSKRNTPVAHAVGFWDYHSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRXAIPIYWNYNYGATGEALRADLXSHPEYIEQNATLCLEAGHWEVDDPGQKSQPSAHDAFVGTGSP 793
            C     +CC   +S     +F    FE     RN       GF+ Y ++  AT  Y   GFG TG    + +E+ AF A    +TS    +    P  WG C  +E++P+  YCD   K +YPC   A+YYGR  + + WNYNYG  G  L  +L   PE +  +  L  EA  W   +P     PS H+   G  SP
Sbjct:   47 CGLTVAYCCAGCVSQCRNCFFTESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYP--GFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCV--ADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSP 240          
The following BLAST results are available for this feature:
BLAST of EY660008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CHID_SOLLC1.939e-3038.38Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHIT_CARPA5.642e-3038.15Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHIB_ARATH1.257e-2936.21Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]
CHI2_BRANA1.641e-2936.78Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHI2_GOSHI2.144e-2937.93Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI1_GOSHI2.144e-2937.93Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHI1_THECC2.370e-2836.72Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]
CHIX_PEA9.007e-2836.99Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHI2_HORVU1.536e-2735.1426 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]
CHI8_POPTR2.007e-2733.33Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660008 ID=EY660008; Name=EY660008; organism=Citrus sinensis; type=EST; length=915bp
TCAACAACGCGCGCGTCCGCCAAGTGATTTCCTAAAAACAGGTAGATCTG
GTGAGAACGAGAAAATAAAGATGAAGAATGGCATTGTGCCAATGACACTG
ACAGTGGCACTAGTACTGGCACTGGCAGTGAGTTTGGCAAATGGAGATGA
ATCAGAGAAGGTGATAGTGAAGAAGGTGAAGGGGAAAAAAGTTTGCATAA
AAGGGTGGGAGTGCCCAACATGGTCGAAATTCTGCTGTAACGAGACGATA
TCAGACTATTTCCAGGTTTACCAGTTTGAGAATTTCTTCTCGAAAAGGAA
CACGCCGGTGGCACATGCCGTGGGCTTCTGGGATTATCACTCTTTCATTA
CTGCCACCGTCAAATATCAGCCCCTCGGCTTCGGTACCACCGGTACTAAG
CTTGATAAGATGAAGGAGATTTGCGCTTTTCTTGCCCACGTCGGCTGCAA
GACCTCTTGTGGATATGGGGTGGCCACTGGAGGACCATTGGCCTGGGGAC
TTTGCTACAACCATGAAATGAGCCCCAGTCAGTCATATTGTGATGATTCC
TACAAATACACATATCCCTGCACCCCTGGAGCTGAGTACTACGGCCGANG
TGCTATACCTATATACTGGAACTATAACTATGGAGCTACTGGGGAAGCAT
TGAGGGCGGATCTGNTGAGTCATCCTGAATACATTGAGCAGAATGCTACC
CTTTGCCTTGAGGCTGGNCATTGGGAAGTGGATGACCCCGGNCAGAAATC
CCAGCCTTCAGCCCATGATGCCTTTGTTGGCACTGGGAGCCCACCAGGAT
GATACTTTGTCCAACGGGGACCTACTTTGGGACACAATGATTATTCTCTA
TGGGGAAAGCGTATGCGGCCAGGGTGATTTTGATGCTATTGACACATTGC
CCCTCATACCTGATT
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