EY659996

Overview
NameEY659996
Unique NameEY659996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659996 vs. ExPASy Swiss-Prot
Match: PUB19_ARATH (U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.598e-47
Identity = 103/238 (43.28%), Postives = 146/238 (61.34%), Query Frame = 2
Query:   38 DPDDKRVLNDVIRILGRFQDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEITIEYLNVDKRS--ELALLSSLMGFLSYCKCIMFDLVDNEASQQVSKKCCNNMLGGLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESGHKNRDIXRTVLAGXLAAEGAMKLLANFISDRLLXGTSEEKTK*LMRV 745
            D DDKR ++ V      F++ I P+  E+ RVLD++G+ KW  C +E+ FL  EI+     V K+S  E+ LLS+LMGF+ YC+C++   +D +  ++  ++    M+  L  DD  CPISLEIM DPV L +GHTYDR+SI KWF +GN TCPKTG+ L S  L+ N  +K++IQ +S  NGV +  + G K  D+     A  LAAE A KL A F++  L+ G  EE  K L+ +
Sbjct:  172 DRDDKRAIDSVYWFFNLFENRINPNSDEILRVLDHIGVRKWRDCVKEIDFLREEIS-----VGKKSNIEIELLSNLMGFICYCRCVILRGIDVDDEEKDKEEDDLMMVRSLNVDDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQSYSKQNGV-VMGQKGKKKVDV-----AESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEI 398          
BLAST of EY659996 vs. ExPASy Swiss-Prot
Match: PUB18_ARATH (U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.176e-45
Identity = 97/233 (41.63%), Postives = 145/233 (62.23%), Query Frame = 2
Query:   38 DPDDKRVLNDVIRILGRFQDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEITIEYLNVDKRS---ELALLSSLMGFLSYCKCIMFDLV---DNEASQQVSKKCCNNMLGGLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESGHKNRDIXRTVLAGXLAAEGAMKLLANFISDRLLXGTSE 718
            + +DKR ++ + RIL  F + + PD  E+ R+LD++GI KW  C +E+ FL  EI  E L+  K+    ++ LLSSLMGF+ YC+CI+   +   D+    +   K  ++++ GL  +D  CPISLEIM DPV + TGHTYDR+SI KWF +GN TCP TG+ L S EL+ N+ ++++I+     NG+ +A  S  + R     V+   LAA+GA KL+A F++  L+ G  E
Sbjct:  173 ETNDKRAVSSINRILALFVNRVVPDPDEINRILDHVGIRKWGDCVKEINFLGEEIDAERLDEKKKKSSDQVELLSSLMGFICYCRCIILGRIERDDHHNHHEDGIKKDHDLIRGLKVEDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRKHCKTNGIVLAGIS--RRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEE 403          
BLAST of EY659996 vs. ExPASy Swiss-Prot
Match: PUB17_ARATH (U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.346e-22
Identity = 62/233 (26.61%), Postives = 107/233 (45.92%), Query Frame = 2
Query:   38 DPDDKRVLNDVIRILGRFQDGIRPDKSEVKRV-LDYLGITKWSQCNQEVKFLDSEITIEYLNVDKRSELALLSSLMGFLSYCKCIMFDLVDNEASQQVSKKCCNNMLGGLT----------PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESGHKNRDIXRTVLAGXLAAE---GAMKLLANFISD 694
            D +D+ +       L  F++G  P   +++   ++ LGI     C  E++FL+ +I     + D     ++++  +    YC+ ++F   ++     +         G +           P DF CPISL++M DPV +STG TYDR SI +W   G+ TCPKTG+ L    ++ N  LK +I  W   +G+S   E      +   + L    A E     + +L  +++D
Sbjct:  187 DKNDESLRESFYSFLDGFENGKIPSSVDLRMFFVEKLGIRDSKSCRSEIEFLEEQIVNH--DGDLEPTGSVINGFVAITRYCRFLLFGFEEDGMEWWIENNPKKPRKGFVAQEIGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLAD 417          
BLAST of EY659996 vs. ExPASy Swiss-Prot
Match: PUB16_ARATH (U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.137e-21
Identity = 59/182 (32.42%), Postives = 100/182 (54.95%), Query Frame = 2
Query:   38 DPDDKRVLNDVIRILGRFQDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEITIEYLNVDKRSELALLSSLMGFLSYCKCIMFDLVDNEASQQVSKKCCNNMLGGLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGV 583
            D  D  +   V   +   +  I PD S + ++ + LG++  +    E++ L+ EI  +   +D RS+ A  +SL+G + Y KC+++      ++     +   ++     P DF CPI+LE+M+DPV ++TG TYDR SI  W ++G++TCPKTG+ L+   L+ N  LK +I  W  D  +
Sbjct:  173 DARDVALRRKVTDTIAGIKHQISPDHSTLIKIFNDLGLSDSASLTDEIQRLEDEIQDQ---IDDRSKSAA-ASLIGLVRYSKCVLY----GPSTPAPDFRRHQSLSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALKNLIVLWCRDQKI 346          
BLAST of EY659996 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.889e-18
Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 2
Query:  368 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESGHKNRDIXRTVLAGXLAAEGAMKLLANFISDRLLXGTSEEK 724
            P+ F CPISLE+MKDPV +STG TY+R+SI KW  AG+ TCPK+ E L    L  N VLK +I  W   NG+ + +  G       RT   G  ++    +     + ++L  GT+E++
Sbjct:  249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNGIELPQNQGS-----CRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQ 362          
BLAST of EY659996 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.448e-17
Identity = 39/83 (46.99%), Postives = 54/83 (65.06%), Query Frame = 2
Query:  368 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESGHKNR 616
            PD+F CPISLE+MKDPV +STG TY+RA I KW  +G+ TCP T +++ +  L  N VL+ +I  W   NG+   + S   N+
Sbjct:  274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEPPKRSTQPNK 356          
BLAST of EY659996 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.448e-17
Identity = 39/83 (46.99%), Postives = 54/83 (65.06%), Query Frame = 2
Query:  368 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESGHKNR 616
            PD+F CPISLE+MKDPV +STG TY+RA I KW  +G+ TCP T +++ +  L  N VL+ +I  W   NG+   + S   N+
Sbjct:  274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEPPKRSTQPNK 356          
BLAST of EY659996 vs. ExPASy Swiss-Prot
Match: PUB45_ARATH (U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16
Identity = 66/228 (28.95%), Postives = 100/228 (43.86%), Query Frame = 2
Query:   29 FDTDPDDKRVLNDVIRIL---GRFQDGIRPDKSEV-KRVLDYLGITKWSQCNQEVKFLDSEITIEYLNVDKRSELALLSSLMGFLSYCKCIMFDLVDNEASQ-------------------------QVSK------KCCNNMLGG----LTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAE 595
            F  DP +K + + +I +L   G F+     ++ EV  +    LGIT       E + L   I    +  DKR E  +   L     Y K    ++ D+  SQ                         Q+SK      + CNN        + P++  CPISL++M DPV +++G TY+R  I KWF  G++TCPKT ++L    L  N  +K +I  W   NGV + +
Sbjct:  128 FSLDPAEKEIGDQIIGLLQQGGNFESSSDNNELEVFHQAATRLGITSSRAALTERRCLKKLIERARMEDDKRKESIVAYLLHLMRKYSKLFRSEIWDDNDSQGSSSLPCSPTIQGSIDDAHGRAFDRQLSKLSSFNFRSCNNNRRSSQMSVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVKALISSWCEQNGVQVPD 355          
BLAST of EY659996 vs. ExPASy Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.704e-16
Identity = 41/93 (44.09%), Postives = 52/93 (55.91%), Query Frame = 2
Query:  320 QQVSKKCCNNMLGGLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEE 598
            Q V  K        + P +F CPI+LEIM DPV ++TG TY++ SI KWF AG+ TCPKT + L    L  N  LK +I  W   N   I E+
Sbjct:  275 QPVINKAITKSTSLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKNNFKIPEK 367          
BLAST of EY659996 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.531e-16
Identity = 48/117 (41.03%), Postives = 70/117 (59.83%), Query Frame = 2
Query:  368 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESGH-----KNRDIXRTVLAGXLAAEGAM--KLLANFISDR 697
            P+DF CPISLE+MKDP  +STG TY+R+ I +W   GN +CPKT ++L++  L  N VL+ +I  W   +  +I +  G+     KN D     L+G ++A  A+  KL +  I DR
Sbjct:  244 PEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRSLISQWCTKH--NIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDR 358          
The following BLAST results are available for this feature:
BLAST of EY659996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
PUB19_ARATH6.598e-4743.28U-box domain-containing protein 19 OS=Arabidopsis ... [more]
PUB18_ARATH6.176e-4541.63U-box domain-containing protein 18 OS=Arabidopsis ... [more]
PUB17_ARATH7.346e-2226.61U-box domain-containing protein 17 OS=Arabidopsis ... [more]
PUB16_ARATH2.137e-2132.42U-box domain-containing protein 16 OS=Arabidopsis ... [more]
PUB14_ARATH2.889e-1840.34U-box domain-containing protein 14 OS=Arabidopsis ... [more]
SL11_ORYSJ5.448e-1746.99Protein spotted leaf 11 OS=Oryza sativa subsp. jap... [more]
SL11_ORYSI5.448e-1746.99Protein spotted leaf 11 OS=Oryza sativa subsp. ind... [more]
PUB45_ARATH2.070e-1628.95U-box domain-containing protein 45 OS=Arabidopsis ... [more]
PUB15_ARATH2.704e-1644.09U-box domain-containing protein 15 OS=Arabidopsis ... [more]
PUB10_ARATH3.531e-1641.03U-box domain-containing protein 10 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-D05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659996 ID=EY659996; Name=EY659996; organism=Citrus sinensis; type=EST; length=910bp
TTCTAACAACCCACGCGTCCGAGCAATATTTGACACTGACCCAGATGATA
AACGGGTCTTAAATGATGTGATCCGGATCTTGGGTCGGTTCCAGGATGGG
ATTCGCCCGGATAAGAGTGAAGTAAAACGGGTTTTGGATTATCTTGGGAT
CACAAAATGGAGTCAGTGCAATCAGGAGGTCAAGTTCTTGGATTCAGAAA
TTACTATTGAGTACTTGAATGTAGATAAAAGAAGCGAATTGGCACTTTTG
AGTAGTCTAATGGGGTTCTTGAGCTACTGCAAATGTATAATGTTTGATCT
TGTTGACAATGAAGCTAGTCAACAAGTTAGCAAGAAGTGTTGCAACAATA
TGCTTGGTGGCTTAACCCCAGATGATTTTACGTGTCCAATTTCTTTGGAG
ATCATGAAAGATCCAGTGACATTATCCACTGGGCATACTTATGATCGAGC
TTCCATCTTGAAATGGTTTAGAGCTGGGAATTCTACTTGTCCCAAGACAG
GTGAGAGGCTACAAAGTAAGGAGTTGCTGGTTAATTTGGTTCTTAAGAGG
ATCATTCAGGATTGGTCTGTTGATAACGGAGTTTCTATTGCTGAAGAATC
AGGTCACAAGAATCGGGATATTANCAGGACGGTTCTTGCAGGNNAGTTGG
CAGCTGAAGGAGCTATGAAATTGTTAGCTAATTTTATTTCTGACAGGCTT
CTGGNAGGGACTAGTGAAGAAAAGACAAAGTAGCTTATGAGGGTCGGCTT
CTCACAAATCTAGCATTTTACAAGTCTGGTTGGGGGGAATTTGGTGCATT
CCAAGTTATTGAACTTTTGCATCAAAGATTCTCAACTCAGAGATGCTATG
CTGCTTGTTGATCTGNCAAACCTGCAAGCAAAACTTGGAAGGGAAAGGGA
GGATTAATTT
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