EY659972

Overview
NameEY659972
Unique NameEY659972
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_HEVBR (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.754e-70
Identity = 135/168 (80.36%), Postives = 139/168 (82.74%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFATYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAFEGGEC 553
            M V QDLLTGDELLSDSFPYKE  NGILWEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKKQF TYMKRFIKLLTPKL EE+QE FKKNIEGATKFLLSKLSDLQFFVGESMHDDG LVFAYY+ GATDPTFLY A A +  +C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_ELAGV (Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.144e-68
Identity = 128/168 (76.19%), Postives = 139/168 (82.74%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFATYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAFEGGEC 553
            M V QDLLTGDELLSDSFPYKE  NG+LWEVEGKWV+QGAV+VDIGANPS               KVVDIVDTFRLQEQPAFDKKQF T+MKR+IK LTPKL  E+QE+FKK+IEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK+GATDPTFLY A   +  +C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_CUCMA (Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.176e-66
Identity = 124/168 (73.81%), Postives = 135/168 (80.36%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFATYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAFEGGEC 553
            M V QDLLTGDELLSDSFPYKE ENG++WEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQP  DKKQF  Y+K+FIKLLTPKL  E+QE FKKNIEGATKFLL KL D +FFVGESMHDD C+VFAYY+EGATDPTFLY+A A +  +C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_SOYBN (Translationally-controlled tumor protein homolog OS=Glycine max GN=TCTP PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.942e-65
Identity = 124/168 (73.81%), Postives = 135/168 (80.36%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFATYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAFEGGEC 553
            M V QDLLTGDELLSDSF YKE ENG+LWEVEGKWVV+GAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKKQF T+MKRFIK LTPKL  E+QE+FKK+IEGATK+LLSK+ D QFFVGESM DD CLVFAYYK+GA DPTFLY A A +  +C
Sbjct:    1 MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKYLLSKIKDFQFFVGESMGDDACLVFAYYKDGAADPTFLYFAYALKEVKC 168          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_SOLLC (Translationally-controlled tumor protein homolog OS=Solanum lycopersicum GN=TCTP PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.942e-65
Identity = 123/168 (73.21%), Postives = 133/168 (79.17%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFATYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAFEGGEC 553
            M V QDLLTGDELLSDSFPYKE ENG+LWEV+GKWVVQGAVDV+IGANPS               +VVDIVDTFRLQEQPAFDKKQF T+MKR+IK LTPKL  E QE FKKNIE ATKFLL K+ DLQFFVGESMHDDG LVFAYYKEG+ DP FLYIA   +  +C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEVENGVLWEVQGKWVVQGAVDVNIGANPSAEGGCEDEGVDDQAVRVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLEGETQEAFKKNIEAATKFLLQKIKDLQFFVGESMHDDGALVFAYYKEGSADPPFLYIAPGLKEIKC 168          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_ORYSJ (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica GN=TCTP PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.438e-64
Identity = 122/168 (72.62%), Postives = 134/168 (79.76%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFATYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAFEGGEC 553
            M V QDLLTGDELLSDSFPY+E ENGILWEV+GKWVVQGA+DVDIGANPS               KVVDIVDTFRLQEQP FDKKQF T+MKR+IK L+ KL  E+QE FKKNIEGATK+LL KL DLQFFVGESMHDDG LVFAYYK+GATDPTFLY +   +  +C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKYLLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 7.136e-64
Identity = 121/168 (72.02%), Postives = 132/168 (78.57%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFATYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAFEGGEC 553
            M V QDLLTGDELLSDSFPYKE +NG+LWEV+GKWVVQGAVDV+IGANPS               KVVDIVDTFRLQEQPAFDKKQF TY+KR+IK LTPKL  E QE FKKNIE ATKFLLSKL D QFFVGE MHDD  LVFAYYK+G+ DPTFLY+A   +  +C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMZ (Translationally-controlled tumor protein homolog OS=Pseudotsuga menziesii GN=TCTP PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.030e-62
Identity = 122/168 (72.62%), Postives = 133/168 (79.17%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFATYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAFEGGEC 553
            M V QDLL+GDELLSDSFPYKE  NG+LWEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQP FDKKQF  ++KR+IK L  KLSEERQ  FKKN+EGA K L+SKLSDLQFFVGESMHDDG +VFAYYK+GATDPTFLY AD  +  +C
Sbjct:    1 MIVYQDLLSGDELLSDSFPYKELYNGVLWEVEGKWVVQGAVDVDIGANPSAEGGDEEGVKIRLV-KVVDIVDTFRLQEQPPFDKKQFLGFIKRYIKNLATKLSEERQAEFKKNVEGAAKMLVSKLSDLQFFVGESMHDDGSMVFAYYKDGATDPTFLYFADGLKEVKC 167          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_FRAAN (Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.295e-62
Identity = 123/170 (72.35%), Postives = 134/170 (78.82%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXX--KVVDIVDTFRLQEQPAFDKKQFATYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAFEGGEC 553
            M V QDLL+GDELLSDSFPYKE +NG+LWEV+GKWVVQGAVDVDIGANPS                 KVVDIVDTFRLQEQP FDKKQF T++KR+IKLLTPKL  E+QE FKKNIEGATKFLLSKLSDLQFFVGESM DD  LVFA YKEGATDP F+Y A   +  +C
Sbjct:    1 MLVYQDLLSGDELLSDSFPYKEIQNGVLWEVDGKWVVQGAVDVDIGANPSAEGADADADEGVDDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSDLQFFVGESMGDDTSLVFASYKEGATDPIFIYFAHGLKEVKC 170          
BLAST of EY659972 vs. ExPASy Swiss-Prot
Match: TCTP_ARATH (Translationally-controlled tumor protein homolog OS=Arabidopsis thaliana GN=TCTP PE=1 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 2.295e-62
Identity = 119/168 (70.83%), Postives = 130/168 (77.38%), Query Frame = 2
Query:   50 MFVSQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFATYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADAFEGGEC 553
            M V QDLLTGDELLSDSFPYKE ENGILWEVEGKWV  GAVDV+IGANPS               KVVDIVDTFRLQEQP +DKK F  Y+K++IKLLTPKLSEE Q +FKK IEGATKFLL +LSD QFFVGE MHDD  LVFAYYKEG+T+PTFLY A   +  +C
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168          
The following BLAST results are available for this feature:
BLAST of EY659972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
TCTP_HEVBR1.754e-7080.36Translationally-controlled tumor protein homolog O... [more]
TCTP_ELAGV2.144e-6876.19Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCMA1.176e-6673.81Translationally-controlled tumor protein homolog O... [more]
TCTP_SOYBN4.942e-6573.81Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLLC4.942e-6573.21Translationally-controlled tumor protein homolog O... [more]
TCTP_ORYSJ1.438e-6472.62Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLTU7.136e-6472.02Translationally-controlled tumor protein homolog O... [more]
TCTP_PSEMZ1.030e-6272.62Translationally-controlled tumor protein homolog O... [more]
TCTP_FRAAN2.295e-6272.35Translationally-controlled tumor protein homolog O... [more]
TCTP_ARATH2.295e-6270.83Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659972 ID=EY659972; Name=EY659972; organism=Citrus sinensis; type=EST; length=867bp
TCATACATAGGTATTTTTCTTTTTTGTGTTCGCGAGAGAGACTGCAATCA
TGTTTGTCTCTCAAGATCTCCTCACCGGTGATGAGCTTCTCTCCGACTCT
TTTCCCTACAAGGAAACTGAGAATGGGATTCTGTGGGAAGTTGAGGGAAA
GTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAATCCTTCTG
CCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCGTGAAGGTG
GTCGACATTGTCGACACATTCAGGCTGCAGGAGCAACCTGCTTTTGACAA
GAAGCAGTTTGCAACATACATGAAGAGATTCATCAAGTTGCTGACGCCCA
AGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATTGAGGGAGCG
ACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTTTGTTGGGGA
GAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACAAGGAAGGTG
CGACCGACCCAACATTTTTGTATATTGCTGATGCATTTGAAGGAGGTGAG
TGCTAAGCCGGGCTTCCAAGAGGGAGTGCCTGCTGTTAGTCTAGTTTTTA
TTATTGGCCGCGGGTATTTTTATGGATCTTTTGGACTGGTTTACTCGGGA
CTGGTGCTTGCTGTTTTTTATTTTTATTTTGCCTTAACAATATGGTTTTC
CGCCTCCTATTTTGGGGTTTTTGGGTTGGGGTTGATTTCCCNATTCCTTT
GCNCTTNCTCCTTAAATAAAAAAAAAAAAGGGGGGCCCCTCTTAAGGCCC
AGCCTTTCTCCGCGGGCTGGGCCCCTAGCCCTTTATTGGGCCCCCTATTC
CTTCCCGGCCGGGGTTT
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