EY659958

Overview
NameEY659958
Unique NameEY659958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659958 vs. ExPASy Swiss-Prot
Match: SF21_HELAN (Pollen-specific protein SF21 OS=Helianthus annuus GN=SF21 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 7.044e-84
Identity = 153/250 (61.20%), Postives = 191/250 (76.40%), Query Frame = 2
Query:   20 DEPVPSNDDLADQIAEVLNHFGLGPVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGMYRP-TLSGSPRVH-*VRVASPQSFFHPKHGAEVKPIKTQIS 763
            D+PVPS +DL DQI  VLN+F LG VMCMG  AGAYILTLF++KY  RV GLIL+SP+CKAPSWTE  YNK+ S  LYYYGMC +VKELL+ RYFSKEV GN ++PESD+V ACR+LLDER S NVW +L+AI+ R DI+E L+ L+C+++IFVG+SSPFH EA+ +  K+    SALVEV ACGSMVT+EQPHAMLIP+E FL G+G+YRP   S SPR         P+  +  K G +++PIK ++S
Sbjct:   95 DDPVPSIEDLCDQILVVLNYFRLGSVMCMGAMAGAYILTLFSIKYSERVTGLILISPICKAPSWTERFYNKLTSKTLYYYGMCDLVKELLIHRYFSKEVCGNPEIPESDMVLACRKLLDERDSVNVWRYLQAIDSRRDITEELKSLECKTIIFVGDSSPFHDEALQIAEKLGTNCSALVEVHACGSMVTQEQPHAMLIPLENFLKGFGLYRPCRYSNSPRSPLGPSSIDPELLYPEKMGLKLRPIKLRVS 344          
BLAST of EY659958 vs. ExPASy Swiss-Prot
Match: NDR1A_XENLA (Protein NDRG1-A OS=Xenopus laevis GN=ndrg1-A PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.913e-21
Identity = 68/219 (31.05%), Postives = 108/219 (49.32%), Query Frame = 2
Query:   32 PSNDDLADQIAEVLNHFGLGPVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGMYRPTLS 664
            PS D LA+ +  V+   GL  VM +G+ AGAYILT FA+ +   V GL+L++    A  W +W   K+        G    + ++++   FSK EV  N ++ E+      + +L +   +NV HF+++ N R D+             L+C +L+ VG+SSP     V   SK+D   + L+++  CG      QP  +    +YF+ G G Y P  S
Sbjct:  114 PSMDQLAEMLPGVVQQLGLRTVMGLGIGAGAYILTRFALNHPSMVEGLVLININPCAEGWMDWAATKIS-------GWTNALPDMVISHLFSKDEVHSNPELVET----YRQHILHDINQNNVQHFVKSYNSRRDLEIERPIPGTNAVTLKCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMSDCGGFPQVIQPAKLAEAFKYFVQGMG-YMPAAS 320          
BLAST of EY659958 vs. ExPASy Swiss-Prot
Match: NDRG1_BOVIN (Protein NDRG1 OS=Bos taurus GN=NDRG1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.805e-21
Identity = 69/219 (31.51%), Postives = 107/219 (48.86%), Query Frame = 2
Query:   32 PSNDDLADQIAEVLNHFGLGPVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACR-RLLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGMYRPTLS 664
            PS D LA+ +  VL  FGL  ++ MG  AGAYILT FA+     V GL+L++    A  W +W  +K+        G    + ++++   F KE   N      ++V A R  ++++    N+  F+ A NGR D+             LQC +L+ VG+SSP     V   SK+D   + L+++  CG +    QP  +    +YF+ G G Y P+ S
Sbjct:  113 PSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEMQN----NVEVVHAYRHHVMNDMNPGNLQLFINAYNGRRDLEIERPMPGAHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSAS 319          
BLAST of EY659958 vs. ExPASy Swiss-Prot
Match: NDRG1_MOUSE (Protein NDRG1 OS=Mus musculus GN=Ndrg1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.466e-20
Identity = 68/219 (31.05%), Postives = 108/219 (49.32%), Query Frame = 2
Query:   32 PSNDDLADQIAEVLNHFGLGPVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGMYRPTLS 664
            PS D LA+ +  VL+ FGL  V+ MG  AGAYILT FA+     V GL+L++    A  W +W  +K+        G    + ++++   F K E+  N +V    +    + +L++   SN+  F+ A N R D+             LQC +L+ VG++SP     V   SK+D   + L+++  CG +    QP  +    +YF+ G G Y P+ S
Sbjct:  113 PSMDQLAEMLPGVLHQFGLKSVIGMGTGAGAYILTRFALNNPEMVEGLVLMNVNPCAEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEIHNNVEV----VHTYRQHILNDMNPSNLHLFISAYNSRRDLEIERPMPGTHTVTLQCPALLVVGDNSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSAS 319          
BLAST of EY659958 vs. ExPASy Swiss-Prot
Match: NDRG1_RAT (Protein NDRG1 OS=Rattus norvegicus GN=Ndrg1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.221e-20
Identity = 68/219 (31.05%), Postives = 108/219 (49.32%), Query Frame = 2
Query:   32 PSNDDLADQIAEVLNHFGLGPVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGMYRPTLS 664
            PS D LA+ +  VL+ FGL  V+ MG  AGAYILT FA+     V GL+L++    A  W +W  +K+        G    + ++++   F K E+  N +V    +    + +L++   SN+  F+ A N R D+             LQC +L+ VG++SP     V   SK+D   + L+++  CG +    QP  +    +YF+ G G Y P+ S
Sbjct:  113 PSMDQLAEMLPGVLHKFGLKSVIGMGTGAGAYILTRFALNNPEMVEGLVLMNVNPCAEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEIHSNVEV----VHTYRQHILNDMNPSNLHLFISAYNSRRDLEIERPMPGTHTVTLQCPALLVVGDNSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSAS 319          
BLAST of EY659958 vs. ExPASy Swiss-Prot
Match: NDRG_DICDI (NDRG-like protein OS=Dictyostelium discoideum GN=DDB_G0270324 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.494e-20
Identity = 57/210 (27.14%), Postives = 112/210 (53.33%), Query Frame = 2
Query:   17 PDEPVPSNDDLADQIAEVLNHFGLGPVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDI-SEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 643
            P    PS  ++A+ I  VL++F +   + +G  AG  ILT +++ Y   V+GL+LV  + K+ SW +W+ + V    L        V++ L+  Y++     N +    D+++  ++ +      N++H++ +   R DI  E ++ L C+ L+ VG+ S +  + + + S+ + R S +++V  CG +VT E+P  ++ P + F+ G G
Sbjct:  107 PSSQYPSITEMAEDIQYVLDYFKVKVFIGLGAGAGGCILTQYSIFYPRSVVGLVLVGSVIKSFSWLDWVKSWVELTTLPSLKNPTGVRKYLIDHYYA----DNLEETNPDLLEIIKKEMVLINPDNLYHYVHSFVKRDDIKEEQIKALGCKILLVVGKDSTYKEDIIDLFSQFNPRNSTILQVPDCGILVTAEKPGDIVEPFKLFMQGIG 312          
BLAST of EY659958 vs. ExPASy Swiss-Prot
Match: NDRG1_HUMAN (Protein NDRG1 OS=Homo sapiens GN=NDRG1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.372e-20
Identity = 66/219 (30.14%), Postives = 107/219 (48.86%), Query Frame = 2
Query:   32 PSNDDLADQIAEVLNHFGLGPVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGMYRPTLS 664
            PS D LA+ +  VL  FGL  ++ MG  AGAYILT FA+     V GL+L++    A  W +W  +K+        G    + ++++   F K E++ N +V    +    + ++++    N+  F+ A N R D+             LQC +L+ VG+SSP     V   SK+D   + L+++  CG +    QP  +    +YF+ G G Y P+ S
Sbjct:  113 PSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEMQSNVEV----VHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSAS 319          
BLAST of EY659958 vs. ExPASy Swiss-Prot
Match: NDRG1_MACFA (Protein NDRG1 OS=Macaca fascicularis GN=Ndrg1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.224e-19
Identity = 66/219 (30.14%), Postives = 106/219 (48.40%), Query Frame = 2
Query:   32 PSNDDLADQIAEVLNHFGLGPVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGMYRPTLS 664
            PS D LA+ +  VL  FGL  ++ MG  AGAYILT FA+     V GL+L++    A  W +W  +K+        G    + ++++   F K E+  N +V    +    + ++++    N+  F+ A N R D+             LQC +L+ VG+SSP     V   SK+D   + L+++  CG +    QP  +    +YF+ G G Y P+ S
Sbjct:  113 PSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEMHSNVEV----VHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSAS 319          
BLAST of EY659958 vs. ExPASy Swiss-Prot
Match: NDR1B_XENLA (Protein NDRG1-B OS=Xenopus laevis GN=ndrg1-B PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.599e-19
Identity = 65/219 (29.68%), Postives = 107/219 (48.86%), Query Frame = 2
Query:   32 PSNDDLADQIAEVLNHFGLGPVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGMYRPTLS 664
            PS D LA+ +  V+   GL  ++ +G+ +GAYILT FA+ +   V GL+L++    A  W +W   K+        G    + E+++   FSK EV  N ++ E+      + +L +   +N+  F+++ N R D+             L+C SL+ VG+SSP     V   SK+D   + L+++  CG      QP  +    +YF+ G G Y P  S
Sbjct:  114 PSMDQLAEMLPGVVQQLGLKSIIGLGIGSGAYILTRFALNHPSMVEGLVLININPCAEGWMDWAATKIS-------GWAHALPEMVISHLFSKDEVHSNPELVET----YRQHILHDINQNNLQLFVKSYNSRRDLEIERPIPGSNTVTLKCPSLLVVGDSSPAVDAVVECNSKLDPTKTTLLKMSDCGGFPQVVQPAKLAEAFKYFVQGMG-YMPAAS 320          
BLAST of EY659958 vs. ExPASy Swiss-Prot
Match: NDRG3_RAT (Protein NDRG3 OS=Rattus norvegicus GN=Ndrg3 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.075e-19
Identity = 65/223 (29.15%), Postives = 113/223 (50.67%), Query Frame = 2
Query:   32 PSNDDLADQIAEVLNHFGLGPVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYF-SKEVRGNAQVPESDIVQACR-RLLDERQSSNVWHFLEAINGRPDI----------SEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGMYRPTLS 664
            P+ D+LA+ +  VL H  +  ++ +GV AGAYIL+ FA+ +   V GL+L++    A  W +W  +K+        G+   V +++L  +F  +E++ N      D++Q  R  +  +    N+  FL + NGR D+             L+ L+C +L+ VG++SP     V   S++D   + L+++  CG +    QP  +    +YFL G G Y P+ S
Sbjct:  111 PTMDELAEMLPPVLTHLSMKSIIGIGVGAGAYILSRFALNHPELVEGLVLINIDPCAKGWIDWAASKLS-------GLTTNVVDIILAHHFGQEELQANL-----DLIQTYRLHIAQDINQENLQLFLGSYNGRRDLEIERPILGQNDNRLKTLKCSTLLVVGDNSPAVEAVVECNSRLDPINTTLLKMADCGGLPQVVQPGKLTEAFKYFLQGMG-YIPSAS 320          
The following BLAST results are available for this feature:
BLAST of EY659958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SF21_HELAN7.044e-8461.20Pollen-specific protein SF21 OS=Helianthus annuus ... [more]
NDR1A_XENLA2.913e-2131.05Protein NDRG1-A OS=Xenopus laevis GN=ndrg1-A PE=2 ... [more]
NDRG1_BOVIN3.805e-2131.51Protein NDRG1 OS=Bos taurus GN=NDRG1 PE=2 SV=1[more]
NDRG1_MOUSE2.466e-2031.05Protein NDRG1 OS=Mus musculus GN=Ndrg1 PE=1 SV=1[more]
NDRG1_RAT3.221e-2031.05Protein NDRG1 OS=Rattus norvegicus GN=Ndrg1 PE=1 S... [more]
NDRG_DICDI5.494e-2027.14NDRG-like protein OS=Dictyostelium discoideum GN=D... [more]
NDRG1_HUMAN9.372e-2030.14Protein NDRG1 OS=Homo sapiens GN=NDRG1 PE=1 SV=1[more]
NDRG1_MACFA1.224e-1930.14Protein NDRG1 OS=Macaca fascicularis GN=Ndrg1 PE=2... [more]
NDR1B_XENLA1.599e-1929.68Protein NDRG1-B OS=Xenopus laevis GN=ndrg1-B PE=2 ... [more]
NDRG3_RAT6.075e-1929.15Protein NDRG3 OS=Rattus norvegicus GN=Ndrg3 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-A01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659958 ID=EY659958; Name=EY659958; organism=Citrus sinensis; type=EST; length=941bp
TTTCGTAAAAGCGCGTCCGGATGAACCTGTACCGTCTAATGATGATTTAG
CGGATCAAATCGCTGAGGTTCTTAACCATTTTGGACTTGGCCCAGTGATG
TGTATGGGGGTTACAGCTGGAGCTTACATTCTTACACTATTTGCTATGAA
ATATAGGCACCGTGTACTTGGGTTAATCCTAGTTTCTCCTCTGTGCAAAG
CACCCTCTTGGACAGAATGGTTGTATAATAAGGTAATGTCAAATTTACTC
TACTACTATGGCATGTGTGGGGTGGTGAAGGAATTATTGCTAAAGCGGTA
CTTCAGCAAGGAAGTTCGTGGTAATGCCCAAGTACCAGAATCTGATATAG
TTCAGGCATGCAGAAGACTGCTGGATGAAAGACAGAGCTCAAATGTTTGG
CATTTTCTTGAAGCAATTAATGGGAGACCCGACATCAGCGAAGGGCTGCG
GAAACTGCAATGCCGCTCTCTAATATTTGTTGGTGAAAGCTCTCCTTTCC
ATTCTGAGGCTGTCCACATGACTTCTAAAATTGATAGAAGATATAGTGCT
TTGGTTGAGGTTCAGGCATGTGGATCGATGGTGACAGAGGAGCAGCCCCA
TGCCATGTTGATACCAATGGAGTACTTTCTCATGGGATATGGAATGTACA
GACCAACTCTAAGTGGTAGCCCAAGAGTCCATTGAGTCCGGGTTGCATCT
CCCCAGAGCTTCTTCCACCCGAAGCATGGGGCTGAAGTAAAACCAATAAA
AACTCAAATTTCCTGCGGGATCTTCTAATTTAAGAAGGAAGAAGAAGGCG
GGGGTCTTTTTTGCAAATATTTGGTTAAGGGGCATGGAAATTTTCTGATT
GGGCCGAACCACAAAAAGGAATTTACAAACCTTGTAATTAGGGAAAAGCC
GGAAGATTCTTGGTTTTATTTAACAAAAACCGGTAAATTCT
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