EY659919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659919 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 6.113e-59 Identity = 94/108 (87.04%), Postives = 99/108 (91.67%), Query Frame = 1 Query: 466 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQTWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRXG*FFQSEIPSVEWGTPWSRTAE 789 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQ WSGIPWFEAGADPGAIAPFSFG+LLGTQL+LMGWVESKR FF + SVEW TPWS+TAE Sbjct: 74 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAE 181 HSP 2 Score: 43.1282 bits (100), Expect = 6.113e-59 Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 2 Query: 815 GSPGGKVFDPFMLAGTIKDGVYIPD 889 G PGGK FDP LAGT+ +GVY+PD Sbjct: 191 GYPGGKFFDPLALAGTLNNGVYVPD 215 HSP 3 Score: 74.3294 bits (181), Expect = 1.023e-12 Identity = 42/71 (59.15%), Postives = 46/71 (64.79%), Query Frame = 2 Query: 44 TSGAVLNGLGSSFINAGKKSQALLAG--TNRVTXXXXXXXXXXLPP--KKSWIPAVKGGGNLINPEWLDGS 244 TS AVLNGL SSF+ G KSQALLA RV L KKSWIPAV+GGGNL++PEWLDGS Sbjct: 4 TSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRGGGNLVDPEWLDGS 74
BLAST of EY659919 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 7.971e-59 Identity = 93/108 (86.11%), Postives = 100/108 (92.59%), Query Frame = 1 Query: 466 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQTWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRXG*FFQSEIPSVEWGTPWSRTAE 789 SLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQ WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKR FF ++ S++W TPWS+TAE Sbjct: 74 SLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAE 181 HSP 2 Score: 43.1282 bits (100), Expect = 7.971e-59 Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 2 Query: 815 GSPGGKVFDPFMLAGTIKDGVYIPD 889 G PGGK FDP LAGT+ +GVY+PD Sbjct: 191 GYPGGKFFDPLALAGTLNNGVYVPD 215 HSP 3 Score: 75.8702 bits (185), Expect = 3.517e-13 Identity = 41/67 (61.19%), Postives = 46/67 (68.66%), Query Frame = 2 Query: 53 AVLNGLGSSFINAGKKSQALLAG--TNRVTXXXXXXXXXX-LPPKKSWIPAVKGGGNLINPEWLDGS 244 AVLNGL SSF+ GKK+QALL T RVT + PKKSWIPAVK GGNL++PEWLDGS Sbjct: 8 AVLNGLSSSFLTGGKKTQALLGAHVTARVTTPKRFVVAAAAVAPKKSWIPAVKSGGNLVDPEWLDGS 74
BLAST of EY659919 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.474e-57 Identity = 92/108 (85.19%), Postives = 98/108 (90.74%), Query Frame = 1 Query: 466 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQTWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRXG*FFQSEIPSVEWGTPWSRTAE 789 SLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIFVGQ W+GIPWFEAGADPGA+APFSFG+LLGTQLLLMGWVESKR FF + SVEW TPWSRTAE Sbjct: 79 SLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAE 186 HSP 2 Score: 41.5874 bits (96), Expect = 1.474e-57 Identity = 18/25 (72.00%), Postives = 19/25 (76.00%), Query Frame = 2 Query: 815 GSPGGKVFDPFMLAGTIKDGVYIPD 889 G PGGK FDP LAGTI +GVY PD Sbjct: 196 GYPGGKFFDPLSLAGTISNGVYNPD 220
BLAST of EY659919 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.087e-14 Identity = 40/91 (43.96%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 466 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQTWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKR 720 SLPGD+GFDPLGLG DP LKW +AEL+H RWAM GIF+ + + I W+ AG +L +L+L+GW E +R Sbjct: 81 SLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFT---DTTTLFVIELVLIGWAEGRR 168
BLAST of EY659919 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13 Identity = 38/91 (41.76%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 466 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQTWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKR 720 SLPGD+GFDPLGL DP L+W ++AEL+H RWAM GIF+ + + I W+ AG +L +L+L+GW E +R Sbjct: 81 SLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFT---DTTTLFIVELVLIGWAEGRR 168
BLAST of EY659919 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 41/117 (35.04%), Postives = 61/117 (52.14%), Query Frame = 1 Query: 466 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQTWSGI------PWFEAGAD---PGAIAPFSFGSLLGTQLLLMGWVESKRXG------*FFQSEIPSVEWGTP 771 SLPGD GFDPLGL +DP L+W+ +AEL++GRWAM V G+ + + ++ I W+ AG + + F +L + + W + K G F Q +P+ E G P Sbjct: 69 SLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYP 185
BLAST of EY659919 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 1 Query: 466 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQTWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKR 720 SL GD GFDPLGL +DP LKW+ +AEL++GRWAM V G+ + + ++ I W++AG + S +L + +L +VE +R Sbjct: 70 SLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFA---SSSTLFVIEFILFHYVEIRR 157 The following BLAST results are available for this feature:
BLAST of EY659919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659919 ID=EY659919; Name=EY659919; organism=Citrus sinensis; type=EST; length=889bpback to top |