EY659914

Overview
NameEY659914
Unique NameEY659914
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659914_ssr338 microsatellite EY659914_ssr338:338..349. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 7.153e-57
Identity = 97/130 (74.62%), Postives = 113/130 (86.92%), Query Frame = 2
Query:  122 MGRAPCCDKS-GLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPR 508
            MGR+PCCD+  G+KKGPW PEED KL  YI ++GYGNWR+LPK AGL RCGKSCRLRW NYLRPDI+RG+F+  EE TI++LH++LGNKWS IA  LPGRTDNEIKNYWNTH+RK+LL+MGIDPVTH PR
Sbjct:    1 MGRSPCCDQDKGVKKGPWLPEEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMNYLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKLLQMGIDPVTHEPR 130          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.744e-55
Identity = 92/128 (71.88%), Postives = 107/128 (83.59%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSP 505
            MGR+PCC+K    KG WT EED KLI YI+ HG G WR+LP++AGLQRCGKSCRLRW NYLRPD+KRG F  EE++ II+LHS+LGNKWS IA RLPGRTDNEIKNYWNTH++++LLR GIDP TH P
Sbjct:    1 MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINYLRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKGIDPATHRP 128          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 7.402e-54
Identity = 92/126 (73.02%), Postives = 108/126 (85.71%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTH 499
            MGR+PCC+K+ + KG WT EEDQ L+DYI+KHG G WR+LP+ AGLQRCGKSCRLRW NYLRPD+KRG F  EE+E II+LHS+LGNKWS IA RLPGRTDNEIKNYWNTHI+++LL  GIDP +H
Sbjct:    1 MGRSPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSRGIDPNSH 126          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 2.154e-53
Identity = 91/116 (78.45%), Postives = 104/116 (89.66%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            MGRAPCC+K GLKKGPWTPEED+ L+ +IQ+HG+GNWR LPK AGL RCGKSCRLRW NYLRPDIKRG F+ EEE+TII LH +LGN+WSAIAARLPGRTDNEIKN W+TH++KRL
Sbjct:    1 MGRAPCCEKMGLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 116          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.674e-53
Identity = 93/128 (72.66%), Postives = 108/128 (84.38%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSP 505
            MGR PCCDK G+KKGPWT EED+KLI +I  +G   WR +PK AGL+RCGKSCRLRWTNYLRPD+KRG  +  EE+ +I LHS LGN+WS IAARLPGRTDNEIKN+WNTHI+K+LL+MGIDPVTH P
Sbjct:    1 MGRQPCCDKLGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCGKSCRLRWTNYLRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEP 128          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.798e-53
Identity = 90/126 (71.43%), Postives = 107/126 (84.92%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTH 499
            MGR+PCC+K+   KG WT EEDQ+L+DYI+ HG G WR+LPK+AGL RCGKSCRLRW NYLRPD+KRG F  +E++ II+LHS+LGNKWS IA RLPGRTDNEIKNYWNTHI+++LL  GIDP TH
Sbjct:    1 MGRSPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSHGIDPQTH 126          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB38_MAIZE (Myb-related protein Zm38 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.798e-53
Identity = 89/128 (69.53%), Postives = 108/128 (84.38%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSP 505
            MGR+PCC+K+   +G WT EED++L+ YI+ HG G WR+LPK AGL RCGKSCRLRW NYLRPD+KRG F  +E++ I++LHS+LGNKWS IAARLPGRTDNEIKNYWNTH+R++LL  GIDPVTH P
Sbjct:    1 MGRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRP 128          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 8.184e-53
Identity = 90/128 (70.31%), Postives = 106/128 (82.81%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSP 505
            MGR+PCC+K+   KG WT EED++L+ YI+ HG G WR+LPK AGL RCGKSCRLRW NYLRPD+KRG F  EE+E II+LHS+LGNKWS IA RLPGRTDNEIKNYWNTHIR++L+  GIDP +H P
Sbjct:    1 MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLINRGIDPTSHRP 128          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.823e-52
Identity = 91/126 (72.22%), Postives = 104/126 (82.54%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTH 499
            MGR+PCC+K+   KG WT EED +L+ YI+ HG G WR+LPK AGL RCGKSCRLRW NYLRPD+KRG F  EE+E II+LHS+LGNKWS IA RLPGRTDNEIKNYWNTHIR++LL  GIDP TH
Sbjct:    1 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPTTH 126          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB1_HORVU (Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.110e-52
Identity = 91/126 (72.22%), Postives = 104/126 (82.54%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTH 499
            MGR+PCC+K+   KG WT EED +L  YI+ HG G WR+LPK AGL RCGKSCRLRW NYLRPD+KRG F+ EE+E II+LHS+LGNKWS IA RLPGRTDNEIKNYWNTHIR++L   GIDPVTH
Sbjct:    1 MGRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLTSRGIDPVTH 126          
The following BLAST results are available for this feature:
BLAST of EY659914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
MYB39_ARATH7.153e-5774.62Transcription factor MYB39 OS=Arabidopsis thaliana... [more]
MYB32_ARATH8.744e-5571.88Transcription factor MYB32 OS=Arabidopsis thaliana... [more]
MYB3_ARATH7.402e-5473.02Transcription factor MYB3 OS=Arabidopsis thaliana ... [more]
MYB4_ORYSJ2.154e-5378.45Myb-related protein Myb4 OS=Oryza sativa subsp. ja... [more]
ODO1_PETHY3.674e-5372.66Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 S... [more]
MYB6_ARATH4.798e-5371.43Transcription repressor MYB6 OS=Arabidopsis thalia... [more]
MYB38_MAIZE4.798e-5369.53Myb-related protein Zm38 OS=Zea mays PE=2 SV=1[more]
MYB4_ARATH8.184e-5370.31Transcription repressor MYB4 OS=Arabidopsis thalia... [more]
MYB08_ANTMA1.823e-5272.22Myb-related protein 308 OS=Antirrhinum majus GN=MY... [more]
MYB1_HORVU3.110e-5272.22Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659914 ID=EY659914; Name=EY659914; organism=Citrus sinensis; type=EST; length=926bp
AAGTGGTAGCCTGCAGTACGGNNAGGAATTTTTCATATGGGGGNGTNNGT
AAAAATATTCCTAAACAGGAGGTTAATTAAATTAGAAGATTTCTAGAGGA
ACTCTTACTAGTTTTAACCCGATGGGAAGAGCACCGTGCTGTGATAAAAG
CGGGCTTAAGAAAGGGCCATGGACACCAGAGGAAGATCAGAAGTTGATAG
ATTACATTCAAAAACACGGCTACGGGAATTGGAGAACACTTCCAAAGAAT
GCCGGTTTGCAAAGATGTGGAAAGAGCTGCCGTCTCCGCTGGACTAACTA
TTTGCGACCGGATATCAAGAGAGGCAGATTTGCTTTTGAAGAAGAAGAAA
CAATAATTCAGCTACATAGTATATTGGGGAACAAGTGGTCTGCAATTGCT
GCTCGCTTGCCTGGAAGAACAGACAATGAAATCAAGAACTACTGGAACAC
TCACATTAGAAAAAGGCTTCTTCGTATGGGAATCGATCCAGTTACTCATA
GCCCTCGTCTTGATCTCCTTGATCTATCTTCGATTCTAAGCTCATCTTTT
TACAGTTCATCTCAAATGAACATTTCGAGGCTTGTCGGGGCGCAGACTTT
AGTTAACCCAGAGCTACTAAGATTGGCCACATCTCTTATGTCAACGCATC
ATCACCGCGAAAACCAAAACCAAATCCAAAAATTTATTTATCAAAATTTT
CAAGAAACCAATATCAGCAATTAGTCCAACCTGATAGTCACCAACTTCAG
ATTCCACTTGAAGCTTGCTGCACATTGACTCCTCCTCCCTCCTCTTGTGG
TTCTCATTCTAATGATCAAGCACAACTAATGAACTCTAATGTAGAGGCAT
TCCCAACAATTTCACCAACTTTAGCAACAAAATTGTCAACAAAGTGATGG
GAGAGCATGGGATTGCCTCGAACTGA
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