EY659903

Overview
NameEY659903
Unique NameEY659903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 1.065e-44
Identity = 86/119 (72.27%), Postives = 89/119 (74.79%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQCS 400
            RHGYFHVVNNDYTHW+ YAIGGSANPTINSQGNRY AP N FAKEVTKRVDT AS WKGWNWRSEGDLL NGAYFT                  KSSS+ G ITS AGAL CR+ RQCS
Sbjct:  312 RHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTKRVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASGSYARASSLSAKSSSLVGHITSDAGALPCRRGRQCS 430          
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.206e-41
Identity = 80/118 (67.80%), Postives = 87/118 (73.73%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397
            RHGYFHVVNNDYTHW+ YAIGGSA PTINSQGNRY AP++ FAKEVTKRV+T AS+WK WNWRSEGDLLLNGA+F P                 K SSM  +ITS AGAL CRK R C
Sbjct:  353 RHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASASYGRASSLAAKPSSMVDTITSTAGALGCRKGRPC 470          
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.489e-38
Identity = 75/118 (63.56%), Postives = 85/118 (72.03%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397
            RHGYFHVVNNDYTHW+ YAIGGSA PTINSQGNR+ AP+N FAKEVTKR  T  S+WK WNWRSEGDL LNGA+FT                  KSSS+ G++TS +GAL CR  R+C
Sbjct:  299 RHGYFHVVNNDYTHWEMYAIGGSAGPTINSQGNRFLAPVNPFAKEVTKREYTGESKWKHWNWRSEGDLFLNGAFFTRSGAGAGANYARASSLSAKSSSLVGTMTSYSGALNCRAGRRC 416          
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.261e-37
Identity = 73/118 (61.86%), Postives = 82/118 (69.49%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397
            RHGYFHVVNNDYTHW+ YAIGGSANPTINSQGNR+ AP   F+KEVTK  D   S+WK WNWRS GDLLLNGA+FTP                 K SS+ G +TS +GAL CRK  +C
Sbjct:  291 RHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408          
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.261e-37
Identity = 73/118 (61.86%), Postives = 81/118 (68.64%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397
            RHGYFHVVNNDYTHW+ YAIGGSANPTINSQGNR+ AP N FAKEVTKRV     +W  WNWRS+GDL+LNGAYFT                  KSSS+ G +TS +GAL CR    C
Sbjct:  301 RHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSGAGASANYARASSLAAKSSSLVGMLTSSSGALKCRIGTLC 418          
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.808e-37
Identity = 75/118 (63.56%), Postives = 81/118 (68.64%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397
            RHGYFHVVNNDYTHW+ YAIGGSA+PTINSQGNRY AP N FAKEVTKR      QW+ WNWRSEGDL LNGA+FT                  KSSS+ G IT  AGAL CR  R+C
Sbjct:  300 RHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAPRNRFAKEVTKRDYAGQWQWRHWNWRSEGDLFLNGAFFTRSGSGLGASYARASSLAAKSSSLVGVITYNAGALNCRGGRRC 417          
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.105e-36
Identity = 72/118 (61.02%), Postives = 84/118 (71.19%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397
            RHGYFHVVNNDYTHW  YAIGGSANPTINSQGNR+ AP N  AKEVTKR+DT  ++W  WNWRSE DLL+NGA+FTP                 K +SM  +IT+ AGAL+CR+ + C
Sbjct:  335 RHGYFHVVNNDYTHWKMYAIGGSANPTINSQGNRFAAPKNHSAKEVTKRLDTKGNEWMEWNWRSEKDLLVNGAFFTP-SGEGASGDSQTLSLPAKPASMVDAITASAGALSCRRGKPC 451          
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 2.013e-35
Identity = 71/118 (60.17%), Postives = 79/118 (66.95%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397
            RHGYFHVVNNDYTHW  YAIGGSA PTINSQGNR+ AP +   KEVTK  D   S+WK WNWRSEGDL LNGA+FTP                 + SS+  S+TS AGAL CRK  +C
Sbjct:  291 RHGYFHVVNNDYTHWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408          
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.013e-35
Identity = 69/118 (58.47%), Postives = 81/118 (68.64%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397
            RHGYFHVVNNDYTHW+ YAIGGSA+PTI SQGNR+ AP   F KEVTK  D   S+W+ WNWRSEGD+LLNGAYF                   + SS+ GSIT+ AG L+CR+ R+C
Sbjct:  292 RHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 409          
BLAST of EY659903 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 4.483e-35
Identity = 70/118 (59.32%), Postives = 80/118 (67.80%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTHWDTYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMAGSITSGAGALTCRKSRQC 397
            RHGYFHVVNNDYTHW  YAIGGSANPTINSQGNR+ AP N FAKEVTKRV +   +WK WNWRS+GDL+LNGAYFT                  K +S+   +T  +GAL CR   +C
Sbjct:  323 RHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRFLAPGNPFAKEVTKRVGSWQGEWKQWNWRSQGDLMLNGAYFTKSGAAAPASYARASSLGAKPASVVSMLTYSSGALKCRIGMRC 440          
The following BLAST results are available for this feature:
BLAST of EY659903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
PEL1_ARATH1.065e-4472.27Probable pectate lyase 1 OS=Arabidopsis thaliana G... [more]
PEL15_ARATH3.206e-4167.80Probable pectate lyase 15 OS=Arabidopsis thaliana ... [more]
PEL8_ARATH1.489e-3863.56Probable pectate lyase 8 OS=Arabidopsis thaliana G... [more]
PEL18_ARATH1.261e-3761.86Probable pectate lyase 18 OS=Arabidopsis thaliana ... [more]
PEL14_ARATH1.261e-3761.86Putative pectate lyase 14 OS=Arabidopsis thaliana ... [more]
PEL20_ARATH2.808e-3763.56Probable pectate lyase 20 OS=Arabidopsis thaliana ... [more]
PEL9_ARATH3.105e-3661.02Probable pectate lyase 9 OS=Arabidopsis thaliana G... [more]
PEL5_ARATH2.013e-3560.17Probable pectate lyase 5 OS=Arabidopsis thaliana G... [more]
PEL11_ARATH2.013e-3558.47Putative pectate lyase 11 OS=Arabidopsis thaliana ... [more]
PEL10_ARATH4.483e-3559.32Probable pectate lyase 10 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-D05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659903 ID=EY659903; Name=EY659903; organism=Citrus sinensis; type=EST; length=916bp
TTTTCACACAGACGCGTCCGNTCATTCATTGACANAAAAAGGGAGACATG
GTTATTTCCATGTGGTGAACAATGACTACACTCACTGGGACACGTATGCC
ATTGGTGGAAGTGCAAACCCCACCATCAACAGCCAGGGAAACAGATACAA
TGCTCCATTGAATGCCTTCGCAAAGGAGGTAACAAAGAGGGTGGACACAG
CTGCAAGCCAGTGGAAGGGCTGGAACTGGAGATCTGAAGGAGACCTCTTG
CTGAACGGTGCCTACTTTACCCCATCCGGAGCAGGAGCCTCAGCTAGCTA
TGCTCGTGCTTCAAGCTTGGGAGCCAAGTCTTCCTCCATGGCTGGATCCA
TTACTTCTGGTGCTGGTGCTCTTACTTGCCGCAAGAGCCGTCAGTGCTCA
TAGTATTCATCATTAAATTGGCCGAAAAAAGAAATGGCCATCGAATTTCT
GTTTTGTTTTTCATTTTTCTTCTATATAGTATATCACCTATCCAATTTAT
CCACAATCTGGTCATTGTTTCAATCTCTACCGTATATCTGCTTCACATAT
TTTGACAAGTGTACATTATTGCACATGTCATTGTATTGCCTCACCCAGTT
TGTTTATCAGTTACTTGCTCAACCTCGGCCTGCTTCAACTGAAAAAACAA
ACATTTGCATTCCCAGAAGCAGGTGCGGAAGTGTTGTTCATTTTATTTTC
CCTCCTTGGCCTCTTTTTTTCAGCCTCATTCTCATTTCCTTTCTACTAGC
ACTTGCCTATTTTGTGTCAGTGTCAGTCAGCTGTCAACTGTCAATCTTGA
GCCCCCTACTACTCTCTTTTTCATTTTGGCTTTTGGGTTATAGGGTCCGA
ATGATTTTGGCTTTTTTCTCCCGCTCCTTGNTGGGTCTAGNCAATAGCAA
CAGATTTGATGCAAAA
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