EY659898

Overview
NameEY659898
Unique NameEY659898
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659898 vs. ExPASy Swiss-Prot
Match: RABEK_BOVIN (Rab9 effector protein with kelch motifs OS=Bos taurus GN=RABEPK PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.287e-14
Identity = 57/189 (30.16%), Postives = 82/189 (43.39%), Query Frame = 3
Query:   39 RVWVQPECTGNGSNGLVRPGPRAFHIA-VAIDCHMFIFGG-RFGSRRLGD--FWVLDTDIWQWSQLTNFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSYVHVLDTISLEWMHLPATGSVPPPRCGHTATMVEKRLLIYXXXXXXXPIMGDLWALQGLVE*ENETPGWTQLKLPGQAPSSRCGHTI 593
            R W  PE TG        P PR FH +  AI   +++FGG   G++ + D    V D +   WSQ    G  PSPR      A G  K+ ++GG  G  +   +H +D   ++W  L  TG+ P     H+A  V K L ++         M    AL  + +   E   WT LK     P+ R  H++
Sbjct:  124 RTWTTPEVTGPP------PSPRTFHTSSAAIGDQLYVFGGGERGAQPVQDVQLHVFDANTLTWSQPETHGKPPSPRHGHVMVAAGT-KLFIHGGLAGDNFYDDLHCIDISDMKWQKLRPTGAAPTGCAAHSAVAVGKHLYVFGG-------MTPTGALNTMYQYHIEKQHWTLLKFENSPPTGRLDHSM 298          
BLAST of EY659898 vs. ExPASy Swiss-Prot
Match: RABEK_CHICK (Rab9 effector protein with kelch motifs OS=Gallus gallus GN=RABEPK PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.131e-13
Identity = 55/187 (29.41%), Postives = 82/187 (43.85%), Query Frame = 3
Query:   45 WVQPECTGNGSNGLVRPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGD--FWVLDTDIWQWSQLTNFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSYVHVLDTISLEWMHLPATGSVPPPRCGHTATMVEKRLLIYXXXXXXXPIMGDLWALQGLVE*ENETPGWTQLKLPGQAPSSRCGHTI 593
            W  PE TG      + P PR FH + A   DC     GG  G+  + D    V DT    W+Q    GD PSPR      A+G  K+ ++GG  G  + + +  +DT  ++W+ + ATG VP  R  H++ + +  L I+         +G    L    +   E   WT L+     P+ R  H +
Sbjct:  124 WESPEVTG------IPPLPRTFHTSSAAIGDCLYVFGGGDKGAEPVKDQQLHVFDTVALAWTQPDTHGDPPSPRHGHVVVAVGT-KLFIHGGLAGDIFYNDLFCIDTTDMKWVKIAATGDVPGGRASHSSAVFKDHLYIFGG-------IGPDGTLDTTYKYHIEEQQWTLLQFDSPLPAGRLDHAM 296          
BLAST of EY659898 vs. ExPASy Swiss-Prot
Match: RABEK_MOUSE (Rab9 effector protein with kelch motifs OS=Mus musculus GN=Rabepk PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.635e-13
Identity = 56/190 (29.47%), Postives = 83/190 (43.68%), Query Frame = 3
Query:   36 NRVWVQPECTGNGSNGLVRPGPRAFHIA-VAIDCHMFIFGG-RFGSRRLGD--FWVLDTDIWQWSQLTNFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSYVHVLDTISLEWMHLPATGSVPPPRCGHTATMVEKRLLIYXXXXXXXPIMGDLWALQGLVE*ENETPGWTQLKLPGQAPSSRCGHTI 593
            +R W  PE TG+       P PR FH +  AI   +++FGG   G++ + D    V D +   WSQ    G  PSPR      A G  K+ ++GG  G K+   +H +D   + W  L  TG+VP     H A  V   + ++         M    AL  + +   E   WT L+     P+ R  H++
Sbjct:  131 DRTWSTPEVTGSP------PSPRTFHTSSAAIGNQLYVFGGGERGAQPVEDVKLHVFDANTLTWSQPETHGSPPSPRHGHVMVAAGT-KLFIHGGLAGDKFFDDLHCIDIGDMSWQKLGPTGAVPVGCAAHAAVAVGHHVYMFGG-------MTATGALNMMYKYHTEKQHWTVLQFDTSLPAGRLDHSM 306          
BLAST of EY659898 vs. ExPASy Swiss-Prot
Match: RABEK_HUMAN (Rab9 effector protein with kelch motifs OS=Homo sapiens GN=RABEPK PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.635e-13
Identity = 55/189 (29.10%), Postives = 82/189 (43.39%), Query Frame = 3
Query:   39 RVWVQPECTGNGSNGLVRPGPRAFHIA-VAIDCHMFIFGG-RFGSRRLGD--FWVLDTDIWQWSQLTNFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSYVHVLDTISLEWMHLPATGSVPPPRCGHTATMVEKRLLIYXXXXXXXPIMGDLWALQGLVE*ENETPGWTQLKLPGQAPSSRCGHTI 593
            R W  PE T         P PR FH +  AI   +++FGG   G++ + D    V D +   WSQ    G+ PSPR      A G  K+ ++GG  G ++   +H +D   ++W  L  TG+ P     H+A  + K + I+         M    AL  + +   E   WT LK     P  R  H++
Sbjct:  124 RTWTTPEVTSPP------PSPRTFHTSSAAIGNQLYVFGGGERGAQPVQDTKLHVFDANTLTWSQPETLGNPPSPRHGHVMVAAGT-KLFIHGGLAGDRFYDDLHCIDISDMKWQKLNPTGAAPAGCAAHSAVAMGKHVYIFGG-------MTPAGALDTMYQYHTEEQHWTLLKFDTLLPPGRLDHSM 298          
BLAST of EY659898 vs. ExPASy Swiss-Prot
Match: RNGB_DICDI (RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.747e-13
Identity = 50/179 (27.93%), Postives = 86/179 (48.04%), Query Frame = 3
Query:   36 NRVWVQPECTGNGSNGLVRPGPRAFHIAVAIDCHMFIFGGRFG--SRRLGDFWVLDTDIWQWSQLTNFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSYVHVLDTISLEWMHLPATGSVPPPRCGHTATMVE-KRLLIYXXXXXXXPIMGDLWAL--QGLVE*ENETPGWTQLKLP 557
            NR ++  + T     G      RA H AV    ++ +FGG     S+      +   +  +W Q    G +PS R   +   + N K+ ++GG+DGKK+ + ++ LD  +  W  + A G+ P PR GH+ATM++  +L+I+         + D+  L  +G  E   E P +  L++P
Sbjct:  112 NRSFIWKQVTTKSIEG------RAGHTAVVYRQNLVVFGGHNNHKSKYYNSVLLFSLESNEWRQQVCGGVIPSARATHSTFQVNNNKMFIFGGYDGKKYYNDIYYLDLETWIWKKVEAKGTPPKPRSGHSATMIQNNKLMIFGGCGSDSNFLNDIHILHIEGANEYRWEQPSYLGLEIP 284          
BLAST of EY659898 vs. ExPASy Swiss-Prot
Match: RABEK_RAT (Rab9 effector protein with kelch motifs OS=Rattus norvegicus GN=Rabepk PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.747e-13
Identity = 55/189 (29.10%), Postives = 81/189 (42.86%), Query Frame = 3
Query:   39 RVWVQPECTGNGSNGLVRPGPRAFHIA-VAIDCHMFIFGG-RFGSRRLGD--FWVLDTDIWQWSQLTNFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSYVHVLDTISLEWMHLPATGSVPPPRCGHTATMVEKRLLIYXXXXXXXPIMGDLWALQGLVE*ENETPGWTQLKLPGQAPSSRCGHTI 593
            R W  PE TG        P PR FH +  AI  H+++FGG   G++ + D    V D +   W+Q    G  PSPR   A  A G  K+ ++GG  G ++   +H +D   + W  L  TG+ P     H A  V   + ++         M    AL  + +   E   WT L+     P  R  H++
Sbjct:  124 RTWSTPEVTG------CPPSPRTFHTSSAAIGNHLYVFGGGERGAQPVQDVKLHVFDANTLTWAQPETHGSPPSPRHGHAMVAAGT-KLFIHGGLAGDRFFDDLHCIDIGDMSWQKLGPTGTAPVGCAAHAAVAVGHHVYVFGG-------MTATGALNTMYKYHTEKQHWTILQFDTSLPPGRLDHSM 298          
BLAST of EY659898 vs. ExPASy Swiss-Prot
Match: ACBP4_ARATH (Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=ACBP4 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.855e-12
Identity = 63/246 (25.61%), Postives = 92/246 (37.40%), Query Frame = 3
Query:   45 WVQPECTGNGSNGLVRPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQW----------SQLTNFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSYVHVLDTISLEWMHLPATGSVPPPRCGHTATMVEKRLLIYXXXXXXXPIMGDLWALQGLVE*ENETPGWTQLKLPGQAPSSRCGHTITSXXXXXXXXXXXXTRGWLSRYDIYYNDTIILDRLPAQWKRLPIGNEPPPARA 752
            W  P+ +G       RP  R  H A  I   M+I+GG    R LGD  VLD   W W          SQ T+   L +P    +  A  N+ + + G          V V D  ++ W  L   G  P  R G + TMV K L+I+        ++ DL  L      + +T  W ++   G +PS R  H                +      +   ++D  +LD    +W R     + P  RA
Sbjct:  171 WTAPQTSGQ------RPKARYEHGAAVIQDKMYIYGGNHNGRYLGDLHVLDLKSWTWSRVETKVATESQETSTPTLLAPCAGHSLIAWDNKLLSIGGHTKDPSESMQVKVFDPHTITWSMLKTYGKPPVSRGGQSVTMVGKTLVIFGGQDAKRSLLNDLHIL------DLDTMTWDEIDAVGVSPSPRSDHAAAVHAERFLLIFGGGS------HATCFDDLHVLDLQTMEWSRPAQQGDAPTPRA 398          
BLAST of EY659898 vs. ExPASy Swiss-Prot
Match: HCF_DROME (Host cell factor OS=Drosophila melanogaster GN=Hcf PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.953e-12
Identity = 48/163 (29.45%), Postives = 79/163 (48.47%), Query Frame = 3
Query:   30 ARNRVWVQPECTGNGSNGLVRPGPRAFHIAVAI------DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSQLTNFGDLPSPRDFAAASAIGNRKIVMYGGW------DGK-------KWLSYVHVLDTISLEWMHL---PATGSVPPPRCGHTATMVEKRLLIY 452
            + N  W+ P+  G+       P PR  H  ++       + ++ I+GG  G R LGD W+L+TD   WS+    G+ P PR   +++ IGN K+ ++GGW      D K       K  + + VLD  ++ W ++       +VP  R GH A  ++ RL ++
Sbjct:  224 SHNGKWIVPKTYGDS------PPPRESHTGISFATKSNGNLNLLIYGGMSGCR-LGDLWLLETDSMTWSKPKTSGEAPLPRSLHSSTMIGN-KMYVFGGWVPLVINDSKSTTEREWKCTNTLAVLDLETMTWENVTLDTVEENVPRARAGHCAVGIQSRLYVW 378          
BLAST of EY659898 vs. ExPASy Swiss-Prot
Match: TYW23_ORYSJ (tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp. japonica GN=Os07g0515000 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.527e-11
Identity = 46/166 (27.71%), Postives = 74/166 (44.58%), Query Frame = 3
Query:   93 PGPRAFHIAVAIDCHMFIFGGRFG-SRRLGDFWVLDTDIWQWSQLTNFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSYVHVLDTISLEWMHLPATGSVPPPRCGHTATMVEKRLLIYXXXXXXXPIMGDLWALQGLVE*ENETPGWTQLKLPGQAPSSRCGH 587
            P PR  H    +   +++ GGR G S  L D WVL+    +WS++   GD   PR   AA+A+ +RK+ ++GG       S ++++DT S++W  +      P  R  H+      +L ++              AL      +  T  W +    G+APS R  H
Sbjct:  346 PSPRMGHTITVVGNDIYVVGGRSGPSEILNDIWVLERSNNRWSKVDCSGDFFRPRHRHAAAAV-DRKVYVFGGLSDDGLCSCMNIMDTASIQWNVISPDDKWPCARHSHSLVSYGSKLFLFGGHDGQR-------ALNDFYSFDTTTLKWNKENTNGKAPSPRFSH 503          
BLAST of EY659898 vs. ExPASy Swiss-Prot
Match: RABEK_XENLA (Rab9 effector protein with kelch motifs OS=Xenopus laevis GN=rabepk PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.994e-11
Identity = 48/187 (25.67%), Postives = 80/187 (42.78%), Query Frame = 3
Query:   45 WVQPECTGNGSNGLVRPGPRAFHIA-VAIDCHMFIFGG-RFGSRRLGD--FWVLDTDIWQWSQLTNFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSYVHVLDTISLEWMHLPATGSVPPPRCGHTATMVEKRLLIYXXXXXXXPIMGDLWALQGLVE*ENETPGWTQLKLPGQAPSSRCGHTI 593
            W  P+  G        P PR FH +  AI+  +++FGG   G+  + D   ++ D     W+Q    GD P  R     +A+G  K+ ++GG  G  +   +  +DT +++W  L   G +PP    H++   +  + I+         M    A   +     ET  W QLK     P +R  H++
Sbjct:  126 WKSPKVMGTP------PSPRTFHTSSAAIEDKLYVFGGGEKGAEPVADTNLYIYDAATMTWTQPVTSGDPPQARHGHVLTALGT-KLFVHGGMAGSTFFKDMFCIDTDTMKWERLKTKGDLPPACAAHSSVAWKSYIYIFGG-------MTSTGATNSMYRYNTETLLWKQLKFDSACPPARLDHSM 298          
The following BLAST results are available for this feature:
BLAST of EY659898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
RABEK_BOVIN3.287e-1430.16Rab9 effector protein with kelch motifs OS=Bos tau... [more]
RABEK_CHICK2.131e-1329.41Rab9 effector protein with kelch motifs OS=Gallus ... [more]
RABEK_MOUSE3.635e-1329.47Rab9 effector protein with kelch motifs OS=Mus mus... [more]
RABEK_HUMAN3.635e-1329.10Rab9 effector protein with kelch motifs OS=Homo sa... [more]
RNGB_DICDI4.747e-1327.93RING finger protein B OS=Dictyostelium discoideum ... [more]
RABEK_RAT4.747e-1329.10Rab9 effector protein with kelch motifs OS=Rattus ... [more]
ACBP4_ARATH6.855e-1225.61Acyl-CoA-binding domain-containing protein 4 OS=Ar... [more]
HCF_DROME8.953e-1229.45Host cell factor OS=Drosophila melanogaster GN=Hcf... [more]
TYW23_ORYSJ1.527e-1127.71tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryz... [more]
RABEK_XENLA1.994e-1125.67Rab9 effector protein with kelch motifs OS=Xenopus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659898 ID=EY659898; Name=EY659898; organism=Citrus sinensis; type=EST; length=909bp
TCATCACAGCGGCGTCCGGCCACGCGTTTGCTAGAAACAGAGTATGGGTT
CAGCCAGAGTGCACTGGAAATGGTTCCAATGGGTTAGTCCGTCCTGGCCC
ACGAGCTTTTCACATTGCTGTTGCAATCGACTGTCATATGTTCATCTTTG
GTGGACGTTTTGGTAGTAGAAGGTTGGGTGACTTCTGGGTCCTAGACACA
GACATATGGCAGTGGTCACAGCTCACCAATTTCGGCGATTTGCCTTCTCC
TAGGGACTTCGCTGCTGCTTCAGCCATTGGAAACCGTAAAATTGTTATGT
ATGGCGGCTGGGATGGTAAAAAGTGGTTGTCATATGTGCATGTCTTGGAC
ACAATATCGCTGGAGTGGATGCATCTTCCAGCTACTGGATCAGTGCCACC
ACCTAGATGTGGCCATACAGCTACAATGGTCGAAAAGCGATTGCTTATCT
ATGGTGGCAGAGGTGGTGGTGGGCCAATCATGGGTGATTTGTGGGCTTTA
CAGGGACTCGTTGAATAAGAGAATGAAACACCTGGATGGACCCAATTGAA
GCTTCCTGGCCAAGCACCTTCTTCTCGTTGTGGGCATACTATTACATCTG
GAGGGCACTACCTCTTGCTATTTGGAGGGCACGGAACACGCGGTTGGTTG
AGCCGTTACGACATTTATTATAATGACACTATTATTTTAGACAGATTGCC
TGCACAATGGAAGCGCTTACCTATTGGCAATGAACCTCCTCCTGCTCGAG
CATACATTCTATGACATGGTTGGGCTCACTCTATCTCATATTTGGTGGCT
TTGATGCGAGTCACATTGGGAAATTTAGAGAGGCTTGGTCCAACAAAGTA
CTCATCGCGAAGCGGTTACTCGATCTCACCTGAAGTCTACTGAAAATACG
ATGCGGTAT
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