EY659896

Overview
NameEY659896
Unique NameEY659896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_SYNJA (GTP cyclohydrolase 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=folE PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.837e-20
Identity = 62/156 (39.74%), Postives = 92/156 (58.97%), Query Frame = 3
Query:  438 QEPDAL-----AIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ-LCTWYQPGSV 884
            QEP+       A+  AV+ LL+G+GED  REG+KKTP RV  AL+  T GY Q+++D++ GA+F E   +           +V++RD+ LFS C+  LLPF  K HV Y+P  Q+V+GLSK   +++ +    + Q RLT ++ + L T   P  V
Sbjct:   34 QEPEGSESLDPAMVAAVETLLRGIGEDPQREGLKKTPERVVAALKFLTSGYRQSLEDLINGAIFDEGHDE-----------MVLLRDITLFSLCEHHLLPFIGKAHVAYIPR-QKVVGLSKIARIVEMYSRRLQVQERLTRQIAEALMTMLDPYGV 177          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_SYNP6 (GTP cyclohydrolase 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=folE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.011e-20
Identity = 56/133 (42.11%), Postives = 84/133 (63.16%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            +E AV+ LL G+GED  REG+ KTP RVA+A R  T GY+Q++ D+V GA+F E   +           +V+VRD+  FS C+  +LPF  KVHV Y+P+ Q+V+GLSK   +++ +    + Q RLT ++ +
Sbjct:   28 MEAAVRTLLLGVGEDPEREGLLKTPKRVAEAYRFLTSGYSQSLDDLVNGAIFDEGHNE-----------MVLVRDITAFSLCEHHMLPFMGKVHVAYIPN-QKVVGLSKLARIVEMYSRRLQVQERLTRQIAE 148          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_SYNE7 (GTP cyclohydrolase 1 OS=Synechococcus elongatus (strain PCC 7942) GN=folE PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.011e-20
Identity = 56/133 (42.11%), Postives = 84/133 (63.16%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            +E AV+ LL G+GED  REG+ KTP RVA+A R  T GY+Q++ D+V GA+F E   +           +V+VRD+  FS C+  +LPF  KVHV Y+P+ Q+V+GLSK   +++ +    + Q RLT ++ +
Sbjct:   28 MEAAVRTLLLGVGEDPEREGLLKTPKRVAEAYRFLTSGYSQSLDDLVNGAIFDEGHNE-----------MVLVRDITAFSLCEHHMLPFMGKVHVAYIPN-QKVVGLSKLARIVEMYSRRLQVQERLTRQIAE 148          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CAMJE (GTP cyclohydrolase 1 OS=Campylobacter jejuni GN=folE PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.011e-20
Identity = 56/132 (42.42%), Postives = 85/132 (64.39%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            ED VK +L+ +GE+ NREG+ KTP+RV KA    T GYTQNVK+I+  ALF  +  +           +V+VRD++ +S C+  LLPF  + HV Y+P+ ++V+GLSK P L++ F    + Q +LT+++ Q
Sbjct:    6 EDCVKTMLEIIGENPNREGLIKTPNRVFKAYEFLTSGYTQNVKEILNDALFESSNNE-----------MVLVRDIEFYSLCEHHLLPFFGRAHVAYIPN-KKVVGLSKIPRLVEVFARRLQIQEQLTEQIAQ 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CAMJD (GTP cyclohydrolase 1 OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=folE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.011e-20
Identity = 56/132 (42.42%), Postives = 85/132 (64.39%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            ED VK +L+ +GE+ NREG+ KTP+RV KA    T GYTQNVK+I+  ALF  +  +           +V+VRD++ +S C+  LLPF  + HV Y+P+ ++V+GLSK P L++ F    + Q +LT+++ Q
Sbjct:    6 EDCVKTMLEIIGENPNREGLIKTPNRVFKAYEFLTSGYTQNVKEILNDALFESSNNE-----------MVLVRDIEFYSLCEHHLLPFFGRAHVAYIPN-KKVVGLSKIPRLVEVFARRLQIQEQLTEQIAQ 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CAMJ8 (GTP cyclohydrolase 1 OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=folE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.011e-20
Identity = 56/132 (42.42%), Postives = 85/132 (64.39%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            ED VK +L+ +GE+ NREG+ KTP+RV KA    T GYTQNVK+I+  ALF  +  +           +V+VRD++ +S C+  LLPF  + HV Y+P+ ++V+GLSK P L++ F    + Q +LT+++ Q
Sbjct:    6 EDCVKTILEIIGENPNREGLIKTPNRVFKAYEFLTSGYTQNVKEILNDALFESSNNE-----------MVLVRDIEFYSLCEHHLLPFFGRAHVAYIPN-KKVVGLSKIPRLVEVFARRLQIQEQLTEQIAQ 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_SYNY3 (GTP cyclohydrolase 1 OS=Synechocystis sp. (strain PCC 6803) GN=folE PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.545e-20
Identity = 53/131 (40.46%), Postives = 85/131 (64.89%), Query Frame = 3
Query:  465 DAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            DAV+V+L+ +GED  REG+ KTP RVA+A++  T+GY Q+++ +V GA+F E   +           +V+VRD+D FS C+  +LPF  K H+ Y+P+ Q+V+GLSK   +++ F    + Q RLT ++ +
Sbjct:   52 DAVRVMLESVGEDPEREGLLKTPKRVAEAMQFLTQGYDQSLEKLVNGAIFDEGHNE-----------MVLVRDIDFFSLCEHHMLPFMGKAHLAYIPN-QKVVGLSKLARIVEMFSRRLQVQERLTRQIAE 170          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CAMJR (GTP cyclohydrolase 1 OS=Campylobacter jejuni (strain RM1221) GN=folE PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.545e-20
Identity = 56/132 (42.42%), Postives = 84/132 (63.64%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            ED VK +L+ +GE+ NREG+ KTP+RV KA      GYTQNVKDI+  ALF  +  +           +V+VRD++ +S C+  LLPF  + HV Y+P+ ++V+GLSK P L++ F    + Q +LT+++ Q
Sbjct:    6 EDCVKTILEIIGENPNREGLIKTPNRVFKAYEFLASGYTQNVKDILNDALFESSNNE-----------MVLVRDIEFYSLCEHHLLPFFGRAHVAYIPN-KKVVGLSKIPRLVEVFARRLQIQEQLTEQIAQ 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_NEUCR (GTP cyclohydrolase 1 OS=Neurospora crassa GN=104H10.80 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 8.548e-20
Identity = 56/131 (42.75%), Postives = 83/131 (63.36%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            ++ AV+ LL+ +GED +REG+  TP R AKA+   TKGY +NV+DIV GA+F E   +           +VIV+D+++FS C+  L+PF  K+H+ Y+PS   V+G+SK P + + F    + Q RLT EV
Sbjct:  132 MKGAVRTLLECIGEDPDREGLLATPERYAKAMLFLTKGYQENVRDIVNGAIFQEGHNE-----------MVIVKDIEVFSMCEHHLVPFTGKMHIGYIPS-NAVIGISKLPRIAELFARRLQIQERLTKEV 250          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CHLCH (GTP cyclohydrolase 1 OS=Chlorobium chlorochromatii (strain CaD3) GN=folE PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.548e-20
Identity = 54/131 (41.22%), Postives = 84/131 (64.12%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            +E AV  +LQ +GED  REG+ KTP RVA+++R  TKGY +N +++++ ALF E+  +           +V+VRD+DLFS C+  +LPF  K HV Y+P G +++GLSK   +++ F    + Q RLT ++
Sbjct:   44 LESAVYTMLQNVGEDPQREGLLKTPERVARSMRFLTKGYHENPEELLQKALFTESYDE-----------MVLVRDIDLFSMCEHHMLPFFGKAHVAYIPDG-KIVGLSKLARVVEVFSRRLQVQERLTQQI 162          
The following BLAST results are available for this feature:
BLAST of EY659896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
GCH1_SYNJA3.837e-2039.74GTP cyclohydrolase 1 OS=Synechococcus sp. (strain ... [more]
GCH1_SYNP65.011e-2042.11GTP cyclohydrolase 1 OS=Synechococcus sp. (strain ... [more]
GCH1_SYNE75.011e-2042.11GTP cyclohydrolase 1 OS=Synechococcus elongatus (s... [more]
GCH1_CAMJE5.011e-2042.42GTP cyclohydrolase 1 OS=Campylobacter jejuni GN=fo... [more]
GCH1_CAMJD5.011e-2042.42GTP cyclohydrolase 1 OS=Campylobacter jejuni subsp... [more]
GCH1_CAMJ85.011e-2042.42GTP cyclohydrolase 1 OS=Campylobacter jejuni subsp... [more]
GCH1_SYNY36.545e-2040.46GTP cyclohydrolase 1 OS=Synechocystis sp. (strain ... [more]
GCH1_CAMJR6.545e-2042.42GTP cyclohydrolase 1 OS=Campylobacter jejuni (stra... [more]
GCH1_NEUCR8.548e-2042.75GTP cyclohydrolase 1 OS=Neurospora crassa GN=104H1... [more]
GCH1_CHLCH8.548e-2041.22GTP cyclohydrolase 1 OS=Chlorobium chlorochromatii... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659896 ID=EY659896; Name=EY659896; organism=Citrus sinensis; type=EST; length=885bp
TCAAACAACGCCGCGTCCGAATAATCATTCCCAAAAAACGTATCCTCTTT
CTTTTCCCTTACCCTCTCCCTCTACTGCTTCTGCTCCCTATCTCTTCACA
TCTCTCTTCTTCTCGCTGTTCTTATTGTCTCTGGCTACCTCTTCTTTTCT
TTTTTCCTCTCTCTCCCCTTTTTTTCTTAATTGACAGTTTTACAAAAAAT
TGATTTTTTATTTTTGTGTGTTCCAGAACCAATCTCTTTTCGAGTTTCCA
ATATCAATATCAATATCAATATCAAAGTTGTTTTGTGTGTACTTTTTTGG
GTTTTTGATTGGTTTGTTTATCTGGGTTGTTGTTATTTTGTGTGTCTCTC
AATCAAATGGGCGCTTTGGATGAGGGACATTTCGATTTGGAGCTTGAGAA
TGGAGTGAAACTGAGTAGCCTTGAGCTTGGCTTTGAGCAAGAACCAGACG
CGCTCGCTATTGAGGATGCCGTCAAAGTTCTCTTGCAAGGATTAGGTGAA
GATATTAATAGAGAAGGCATCAAGAAGACTCCTCATCGCGTTGCCAAAGC
TCTTCGTGAAGGAACCAAAGGTTACACACAAAATGTAAAAGACATTGTTG
AAGGTGCTTTGTTCCCTGAAGCANGTGTGGATCATGGAATTGGTCATGCC
GGAGGAGCAGGTGGGCTTGTGATTGTTCGAGATCTTGACCTCTTCTCATA
CTGCCAGTCTTGTTTGCTTCCTTTTCAGGTTAAAGTTCATGTANGCTATG
TGCCATCTGGTCAACGAGTTTTGGGATTAAGCAAGTCTCCAGAGTTGCTG
AAGTCTTTTCAAACGACTCCAAAACCACAGCGTCTAACAGATGAAGTGTG
TCAGCTTTGCACATGGTATCAGCCGGGCAGTGTTG
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