EY659870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659870 vs. ExPASy Swiss-Prot
Match: RL131_ARATH (60S ribosomal protein L13-1 OS=Arabidopsis thaliana GN=RPL13B PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.779e-39 Identity = 78/96 (81.25%), Postives = 88/96 (91.67%), Query Frame = 3 Query: 42 PKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVELVKVTQDMKSFKAYDKL 329 PKKLAPTIG++VDHRRKNRSLEGLQ+NVQRLKTYK KLV+FPRRARK KAGDS PEELA ATQVQG Y+PI EKPT+ELVK+T +MKSFKA+DK+ Sbjct: 85 PKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180
BLAST of EY659870 vs. ExPASy Swiss-Prot
Match: RL133_ARATH (60S ribosomal protein L13-3 OS=Arabidopsis thaliana GN=RPL13D PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.153e-38 Identity = 79/96 (82.29%), Postives = 87/96 (90.62%), Query Frame = 3 Query: 42 PKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVELVKVTQDMKSFKAYDKL 329 PKKLAPTIG+SVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRR+R+ KAGDS PEELA ATQVQG YMPIA K +ELVK+T D+K+FKAYDK+ Sbjct: 85 PKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKI 180
BLAST of EY659870 vs. ExPASy Swiss-Prot
Match: RL132_BRANA (60S ribosomal protein L13-2 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.841e-37 Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 3 Query: 42 PKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVELVKVTQDMKSFKAYDKL 329 PKKLAPTIG+S+DHRRKNRSLEGLQSNVQRLKTYKAKLV+FPRRARK KAGDS EELA ATQVQG YMPI EK +ELVK+T +MKS AYDK+ Sbjct: 85 PKKLAPTIGISLDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKQAMELVKLTSEMKSVNAYDKI 180
BLAST of EY659870 vs. ExPASy Swiss-Prot
Match: RL131_BRANA (60S ribosomal protein L13-1 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.846e-37 Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 3 Query: 42 PKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVELVKVTQDMKSFKAYDKL 329 PKKLAPTIG++VDHRRKNRSLEGLQSNVQRLKTYKAKLV+FPRRARK KAGDS EELA ATQVQG YMPI EK ELVK+T +MKS KA+DK+ Sbjct: 85 PKKLAPTIGIAVDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKHATELVKLTTEMKSVKAFDKI 180
BLAST of EY659870 vs. ExPASy Swiss-Prot
Match: RL132_ARATH (Putative 60S ribosomal protein L13-2 OS=Arabidopsis thaliana GN=RPL13C PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.014e-34 Identity = 72/96 (75.00%), Postives = 80/96 (83.33%), Query Frame = 3 Query: 42 PKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVELVKVTQDMKSFKAYDKL 329 PKKLAPTIG+SVDH RKNRSLEG Q+NVQRLKTYKAKLV+FPR AR K GDSA +ELA ATQVQ +MPI E PT+ELVK+T DMK F AYDK+ Sbjct: 85 PKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKI 180
BLAST of EY659870 vs. ExPASy Swiss-Prot
Match: FIMB2_ARATH (Fimbrin-like protein 2 OS=Arabidopsis thaliana GN=FIM2 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 9.160e-28 Identity = 59/85 (69.41%), Postives = 69/85 (81.18%), Query Frame = 3 Query: 369 ALLWQMMRYNVLQLLKNLRFHSHGKEITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTKGVT 623 A LWQ+MRY +LQLL+NLR HS GKEITDADIL WAN KV+ G S +SF+DK+L+ G+FFLELLSAV+PR VNWSLVT G T Sbjct: 488 AFLWQLMRYTMLQLLRNLRSHSQGKEITDADILNWANRKVKRGGRTSQADSFRDKNLSSGMFFLELLSAVEPRVVNWSLVTNGET 572
BLAST of EY659870 vs. ExPASy Swiss-Prot
Match: FIMB1_ARATH (Fimbrin-1 OS=Arabidopsis thaliana GN=FIM1 PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 5.557e-25 Identity = 55/84 (65.48%), Postives = 68/84 (80.95%), Query Frame = 3 Query: 372 LLWQMMRYNVLQLLKNLRFHSHGKEITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTKGVT 623 LLWQ+MR+++LQLLK+LR + GKE+TDADIL WAN KVR G + + SFKDKSL+ G+FFL LL AV+PR VNW+LVTKG T Sbjct: 489 LLWQLMRFHMLQLLKSLRSRTLGKEMTDADILSWANRKVRTMGRKLQIESFKDKSLSSGLFFLNLLWAVEPRVVNWNLVTKGET 572
BLAST of EY659870 vs. ExPASy Swiss-Prot
Match: RL13_TOBAC (60S ribosomal protein L13 OS=Nicotiana tabacum GN=RPL13 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.112e-24 Identity = 59/96 (61.46%), Postives = 70/96 (72.92%), Query Frame = 3 Query: 42 PKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVELVKVTQDMKSFKAYDKL 329 PKKLAPTIG++VDHRR+NRSLEGLQ+NVQRL+ + +LVVFPRRA + + P TATQV G YMPI EK + L KV + MKSF AY KL Sbjct: 81 PKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLEDLQGQLVVFPRRASRSRLVILPPRNCLTATQVHGAYMPIEREKHQLILSKVLKKMKSFNAYAKL 176
BLAST of EY659870 vs. ExPASy Swiss-Prot
Match: RL13_CHLSW (60S ribosomal protein L13 OS=Chlamydomonas sp. (strain W80) GN=RPL13 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.602e-24 Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = 3 Query: 42 PKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVELVKVTQDMKSFKAYDKL 329 P K APT+G++VDHRRKNRSLE LQ+NVQRLKTY+A LV+FPR +K KA +++ + + A+Q +G +P+ KP +ELVK+T DMK Y KL Sbjct: 86 PAKFAPTVGIAVDHRRKNRSLETLQANVQRLKTYRASLVIFPRNMKKPKAFEASAADCSAASQAKGELLPLKGTKPALELVKITADMKEGSQYGKL 181
BLAST of EY659870 vs. ExPASy Swiss-Prot
Match: FIMB3_ARATH (Putative fimbrin-like protein 3 OS=Arabidopsis thaliana GN=FIM3 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.602e-24 Identity = 59/126 (46.83%), Postives = 86/126 (68.25%), Query Frame = 3 Query: 246 MPIAPEKPTVELVKVTQDMKS--FKAYDKLLFMNNECWLLFFSALLWQMMRYNVLQLLKNLRFHSHGKEITDADILQWANAKVRISGSQSHMNSFKDKSLADGIFFLELLSAVQPRAVNWSLVTKG 617 MP + ++VK+ ++M+ + N+ +L F LWQ+MR ++LQLLK+LR + GK++TD++I+ WAN KVRI G +S + SFKDKSL+ G+FFL+LL AV+PR VNW+LVTKG Sbjct: 449 MPFRKVENCNQVVKIGKEMRFSLVNVAGNDIVQGNKKLILGF---LWQLMRTHMLQLLKSLRSRTRGKDMTDSEIISWANRKVRIMGRKSQIESFKDKSLSSGLFFLDLLWAVEPRVVNWNLVTKG 571 The following BLAST results are available for this feature:
BLAST of EY659870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659870 ID=EY659870; Name=EY659870; organism=Citrus sinensis; type=EST; length=929bpback to top |