EY659823

Overview
NameEY659823
Unique NameEY659823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659823 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.066e-15
Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 3 
Query:   27 WXDGXXRVFERGRXIELDIDKN*GCGFVXKRK*WXGXVXMKIKVVDGEYGGIVNGFYMNXXXENVREEIDL*VLG 251
            W +   R  E G+ I+L +D++ GCGF  KRK   G V MKIK++ G+  G V  FYMN     VR+E+D   LG
Sbjct:   43 WSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLG 117

HSP 2 Score: 35.039 bits (79), Expect = 3.066e-15
Identity = 14/31 (45.16%), Postives = 18/31 (58.06%), Query Frame = 1 
Query:  286 NXYGNGIGDRGERVNXWFXXDGDYEV*IIVW 378
            N + +G GDR +RVN WF    DY    I+W
Sbjct:  129 NIFAHGKGDREQRVNLWFDPSMDYHTYTILW 159
[Close]
BLAST of EY659823 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 1.557e-13
Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 3 
Query:   27 WXDGXXRVFERGRXIELDIDKN*GCGFVXKRK*WXGXVXMKIKVVDGEYGGIVNGFYMNXXXENVREEIDL*VLG 251
            W D      + GR I+L +D + GCGF  K++   G V MKIK++ G+  G V  FYMN   ++VR+E+D   LG
Sbjct:   42 WSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLG 116

HSP 2 Score: 31.9574 bits (71), Expect = 1.557e-13
Identity = 13/31 (41.94%), Postives = 17/31 (54.84%), Query Frame = 1 
Query:  286 NXYGNGIGDRGERVNXWFXXDGDYEV*IIVW 378
            N + +G GDR +RVN WF    D+    I W
Sbjct:  128 NVFAHGKGDREQRVNLWFDPSRDFHEYAISW 158
The following BLAST results are available for this feature:
BLAST of EY659823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
XTH6_ARATH3.066e-1544.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH1.557e-1341.33Probable xyloglucan endotransglucosylase/hydrolase... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659823 ID=EY659823; Name=EY659823; organism=Citrus sinensis; type=EST; length=800bp
TCTAAAAGAGGAGGATGTAAAGTAGATGGTNAGATGGANATNTTAGGGTT
TTTGAGCGAGGGAGGGNTATTGAGTTAGATATAGATAAAAATTAAGGATG
TGGGTTTGTNTNNAAAAGGAAGTAATGGTTNGGGNGTGTAAGNATGAAGA
TTAAGGTGGTTGATGGAGAATATGGTGGAATTGTAAATGGATTTTATATG
AATTNNAANATNGAAAATGTGAGAGAGGAGATTGATTTGTGAGTTTTGGG
AAAGNGAANGGTGTATGATGAAATGGAGGATGAGGAATATNTATGGAAAT
GGAATAGGTGATAGAGGAGAGAGAGTGAATATNTGGTTTGANANTGATGG
AGATTATGAAGTGTAGATTATTGTNTGGAANATNANNATATTGGGTTNTA
TGTGGATGATGTGNANATNAGGGTTTGAAAAATAGTGGAGGGNTANATGT
NTATGAGNAAAANATGGGGGGTATTTTAAGTTGTGAGAAAAGATGAGGGG
GAATAAGAAGGGGTTAGAGAAATAGATTGGANAAAGGTATTTTTTTGTTT
ATAGAAAGAATTGGAATTGGGGGGTGAAAAGTTGTTGGAAAAAAAATGGG
TATGGAAGAAGGGAATGGAGGGGAGGGAATAATTTTAAGNNGTTTNGGTT
GGGAAGAAGGAGAAAAAAAGGGTTGGTGAAANAATTGGTTATGGTTTTTG
AAGGGTTAATAAGATTGAAGGAAATTAATGGGAGGTTTGGGGGGTAAAAT
TAAANGGGGTTTATTAAGGGGTGGGAGGATTGGTTTGGAAAAAAATAGGA
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