EY659820

Overview
NameEY659820
Unique NameEY659820
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659820 vs. ExPASy Swiss-Prot
Match: YTHD1_MOUSE (YTH domain family protein 1 OS=Mus musculus GN=Ythdf1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.556e-38
Identity = 82/153 (53.59%), Postives = 100/153 (65.36%), Query Frame = 1
Query:  133 EHQIWCLGQQPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWEVIKDVPNSQFRHIVLENNDNKPVTKSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQKAMQ-ERKARQ 588
            ++ IWC  +  +GNK+LD A+     K    PV+L FSVN S  FCGVAEM  PVD+  S   W QDKW G+F +KW  +KDVPN+Q RHI LENNDNKPVT SRDTQEV LE+  ++L I  +Y    SI DDF  YE RQ+  +  RK RQ
Sbjct:  407 KYSIWCSTE--HGNKRLDGAFRSMSSKG---PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEEVVRKERQ 554          
BLAST of EY659820 vs. ExPASy Swiss-Prot
Match: YTHD2_MACFA (YTH domain family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.657e-37
Identity = 79/153 (51.63%), Postives = 98/153 (64.05%), Query Frame = 1
Query:  133 EHQIWCLGQQPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWEVIKDVPNSQFRHIVLENNDNKPVTKSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQKAMQERKARQQ 591
            ++ IWC  +  +GNK+LDAAY     K    PV+L FSVN S  FCGVAEM   VD+      W QDKW G+F ++W  +KDVPNSQ RHI LENN+NKPVT SRDTQEV LE+  ++L I  +Y    SI DDF  YE RQ+  +  K  +Q
Sbjct:  428 KYNIWCSTE--HGNKRLDAAYRSMNGKG---PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQ 575          
BLAST of EY659820 vs. ExPASy Swiss-Prot
Match: YTHD2_HUMAN (YTH domain family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.657e-37
Identity = 79/153 (51.63%), Postives = 98/153 (64.05%), Query Frame = 1
Query:  133 EHQIWCLGQQPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWEVIKDVPNSQFRHIVLENNDNKPVTKSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQKAMQERKARQQ 591
            ++ IWC  +  +GNK+LDAAY     K    PV+L FSVN S  FCGVAEM   VD+      W QDKW G+F ++W  +KDVPNSQ RHI LENN+NKPVT SRDTQEV LE+  ++L I  +Y    SI DDF  YE RQ+  +  K  +Q
Sbjct:  428 KYNIWCSTE--HGNKRLDAAYRSMNGKG---PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQ 575          
BLAST of EY659820 vs. ExPASy Swiss-Prot
Match: YTHD2_BOVIN (YTH domain family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.657e-37
Identity = 79/153 (51.63%), Postives = 98/153 (64.05%), Query Frame = 1
Query:  133 EHQIWCLGQQPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWEVIKDVPNSQFRHIVLENNDNKPVTKSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQKAMQERKARQQ 591
            ++ IWC  +  +GNK+LDAAY     K    PV+L FSVN S  FCGVAEM   VD+      W QDKW G+F ++W  +KDVPNSQ RHI LENN+NKPVT SRDTQEV LE+  ++L I  +Y    SI DDF  YE RQ+  +  K  +Q
Sbjct:  429 KYNIWCSTE--HGNKRLDAAYRSMNGKG---PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQ 576          
BLAST of EY659820 vs. ExPASy Swiss-Prot
Match: YTHD1_HUMAN (YTH domain family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.164e-37
Identity = 81/153 (52.94%), Postives = 101/153 (66.01%), Query Frame = 1
Query:  133 EHQIWCLGQQPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWEVIKDVPNSQFRHIVLENNDNKPVTKSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQKAMQ-ERKARQ 588
            ++ IWC  +  +GNK+LD+A+     K    PV+L FSVN S  FCGVAEM  PVD+  S   W QDKW G+F ++W  +KDVPN+Q RHI LENNDNKPVT SRDTQEV LE+  ++L I  +Y    SI DDF  YE RQ+  +  RK RQ
Sbjct:  407 KYSIWCSTE--HGNKRLDSAFRCMSSKG---PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIISSYKHTTSIFDDFAHYEKRQEEEEVVRKERQ 554          
BLAST of EY659820 vs. ExPASy Swiss-Prot
Match: YTHD3_PONAB (YTH domain family protein 3 OS=Pongo abelii GN=YTHDF3 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.081e-36
Identity = 79/156 (50.64%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  133 EHQIWCLGQQPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWEVIKDVPNSQFRHIVLENNDNKPVTKSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQ---KAMQERKARQQ 591
            ++ IWC  +  +GNK+LDAAY     K    P++L FSVN S  FCGVAEM   VD+      W QDKW G+F +KW  +KDVPN+Q RHI LENNDNKPVT SRDTQEV LE+  ++L I   +    SI DDF  YE RQ   +AM+  + R +
Sbjct:  434 KYSIWCSTE--HGNKRLDAAYRSLNGKG---PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRERNRNK 584          
BLAST of EY659820 vs. ExPASy Swiss-Prot
Match: YTHD3_MOUSE (YTH domain family protein 3 OS=Mus musculus GN=Ythdf3 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 4.081e-36
Identity = 79/156 (50.64%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  133 EHQIWCLGQQPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWEVIKDVPNSQFRHIVLENNDNKPVTKSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQ---KAMQERKARQQ 591
            ++ IWC  +  +GNK+LDAAY     K    P++L FSVN S  FCGVAEM   VD+      W QDKW G+F +KW  +KDVPN+Q RHI LENNDNKPVT SRDTQEV LE+  ++L I   +    SI DDF  YE RQ   +AM+  + R +
Sbjct:  434 KYSIWCSTE--HGNKRLDAAYRSLNGKG---PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRERNRNK 584          
BLAST of EY659820 vs. ExPASy Swiss-Prot
Match: YTHD3_HUMAN (YTH domain family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.081e-36
Identity = 79/156 (50.64%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  133 EHQIWCLGQQPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWEVIKDVPNSQFRHIVLENNDNKPVTKSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQ---KAMQERKARQQ 591
            ++ IWC  +  +GNK+LDAAY     K    P++L FSVN S  FCGVAEM   VD+      W QDKW G+F +KW  +KDVPN+Q RHI LENNDNKPVT SRDTQEV LE+  ++L I   +    SI DDF  YE RQ   +AM+  + R +
Sbjct:  434 KYSIWCSTE--HGNKRLDAAYRSLNGKG---PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRERNRNK 584          
BLAST of EY659820 vs. ExPASy Swiss-Prot
Match: YD374_YEAST (YTH domain-containing protein YDR374C OS=Saccharomyces cerevisiae GN=YDR374C PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.133e-20
Identity = 47/124 (37.90%), Postives = 75/124 (60.48%), Query Frame = 1
Query:  169 GNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQD-KWSGQFPLKWEVIKDVPNSQFRHIVLENNDNKPVTKSRDTQEVKLEQGIEMLNIFKNYVTDM-SILDD 534
            GNK+L  AY   K+      VFLFFS+N S +FCGVAEM   +  +     W+ + K+   F ++W +++D+ N   +  ++ +N+ KP+T SRDTQE+    GI ++N+FK   +D+ S LD+
Sbjct:  183 GNKRLSEAY---KKLNSGAKVFLFFSINTSGRFCGVAEMVSDLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITHSRDTQEIPYSIGISIINLFKTQDSDIFSFLDE 303          
The following BLAST results are available for this feature:
BLAST of EY659820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
YTHD1_MOUSE2.556e-3853.59YTH domain family protein 1 OS=Mus musculus GN=Yth... [more]
YTHD2_MACFA1.657e-3751.63YTH domain family protein 2 OS=Macaca fascicularis... [more]
YTHD2_HUMAN1.657e-3751.63YTH domain family protein 2 OS=Homo sapiens GN=YTH... [more]
YTHD2_BOVIN1.657e-3751.63YTH domain family protein 2 OS=Bos taurus GN=YTHDF... [more]
YTHD1_HUMAN2.164e-3752.94YTH domain family protein 1 OS=Homo sapiens GN=YTH... [more]
YTHD3_PONAB4.081e-3650.64YTH domain family protein 3 OS=Pongo abelii GN=YTH... [more]
YTHD3_MOUSE4.081e-3650.64YTH domain family protein 3 OS=Mus musculus GN=Yth... [more]
YTHD3_HUMAN4.081e-3650.64YTH domain family protein 3 OS=Homo sapiens GN=YTH... [more]
YD374_YEAST9.133e-2037.90YTH domain-containing protein YDR374C OS=Saccharom... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659820 ID=EY659820; Name=EY659820; organism=Citrus sinensis; type=EST; length=925bp
ATGGTAGTCGATTATACGGTCCGGATTCTTTCACAGAGGGGGTNNGGATN
TTGTTACTATAGGAGGGNNAGATNTTGTANNGATAAAAGATGAAAGTTTT
TTTTTCCCTAAAAAGGGAAGATAATGTACAAAGAGCATCAAATATGGTGT
CTGGGNCAGCAACCAAATGGTAACAAGAAGTTAGATGCTGCTTATTGTGA
AGCTAAAGAGAAGCAAGATCCATGTCCAGTGTTTCTCTTCTTTTCGGTTA
ATGCTAGTGCTCAGTTCTGTGGTGTGGCTGAAATGTTTGGTCCTGTTGAT
TTTGAAAAGAGTGTGGATTACTGGCAGCAAGATAAATGGAGTGGGCAGTT
CCCTCTTAAGTGGGAGGTTATCAAAGATGTCCCAAATAGTCAGTTTCGGC
ACATTGTACTGGAAAATAATGACAACAAGCCTGTCACTAAGAGTCGGGAT
ACACAGGAGGTGAAATTGGAGCAAGGCATTGAGATGTTAAACATCTTTAA
GAATTATGTAACCGATATGTCAATCCTGGATGATTTTGATTTCTATGAAG
ATCGGCAGAAAGCCATGCAGGAAAGGAAGGCAAGACAGCAAGCTAGCTTG
ATGGCTGTAGGGGTAGTTGGAGAGAATGATCATAAAAATGCAGTCACCTA
TTCCACTGATTTTATCAAGCAGATGTCCAAGAGCTTTGCTCAAGTTGTCC
GCTTGGATGAGGGTAACAAAGACGGCATGGGTGTAGACAAAGCTACTTCT
GCCTCCGGCGGCNTCATGGGTGCCAGAGGTAACTTGAAGATGCTCTTACT
GGCGTCGTCTCTTCTGCTCAGTCCAGTTAGGAAACACATCTTGGGTGGGG
ATCCTGTTCTGTATGGGACGAACTCCATTCTACTCCTTCAGTATTTTATT
GTTTTAGGAAATGTNAGACTCTGAT
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