EY659802

Overview
NameEY659802
Unique NameEY659802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659802 vs. ExPASy Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.061e-12
Identity = 45/152 (29.61%), Postives = 82/152 (53.95%), Query Frame = 1 
Query:  283 SGLAVRGQEGSA*PKTTLRAMVDLRPPRVVAGPFARWVPADATHIKIXXXXXXXXXXXXXMNACDPTHLDLPVNEKFFLLPLSPPQMA*IPQASALDLLSVEAFLKLHD*AYWRK*SRLAASHPRYELLTIISAMPIDEIQSLESHPAKYYR 738
            +GL +R Q+  + P+++ R+++ L    +  G F + V A+A  IK+              N+       L + ++F++ PLSP + A   + SA ++++V++F+      Y +   RL AS+ RY+L T+ISA P +E QSL+   AK ++
Sbjct:   43 TGLVIRAQQNVSVPESSRRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQ 194
[Close]
BLAST of EY659802 vs. ExPASy Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 2.939e-11
Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 1 
Query:  286 GLAVRGQEGSA*PKTTLRAMVDLRPPRVVAGPFARWVPADATHIKIXXXXXXXXXXXXXMNACDPTHLDLP-VNEKFFLLPLSPPQMA*IPQASALDLLSVEAFLKLHD*AYWRK*SRLAASHPRYELLTIISAMPIDEIQSLESHPAKYY 735
            GL +R Q+ SA  +T+ RAM+      + +G F + V A+A  I +              N+       LP   ++F+L PL P + A   + SA ++L+V+ F+        +   RL AS+ RY+L T+ISA P DE +SL+   +K +
Sbjct:   45 GLNIRAQQVSAEAETSRRAMLGFVAAGLASGSFVKAVLAEARPIVVGPPPPLSGGLPGTENSDQARDGTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPKDEKKSLQELTSKLF 195

HSP 2 Score: 23.8682 bits (50), Expect = 2.939e-11
Identity = 11/24 (45.83%), Postives = 14/24 (58.33%), Query Frame = 3 
Query:  213 GSCALSGPNRLKTPTKK*VAAARL 284
            GS  +SG NRL  PT   VA  ++
Sbjct:   21 GSLQISGSNRLSGPTTSRVAVPKM 44

HSP 3 Score: 20.4014 bits (41), Expect = 2.939e-11
Identity = 10/27 (37.04%), Postives = 16/27 (59.26%), Query Frame = 3 
Query:  711 REPPCKVLQTSGHL*HAGMIISPSEAD 791
            +E   K+  +  +L HA  I SP+EA+
Sbjct:  188 QELTSKLFSSIDNLDHAAKIKSPTEAE 214
The following BLAST results are available for this feature:
BLAST of EY659802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PSBQ2_ARATH2.061e-1229.61Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
PSBQ_SPIOL2.939e-1131.13Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659802 ID=EY659802; Name=EY659802; organism=Citrus sinensis; type=EST; length=831bp
CTGGACGCCTGAGGACCGGTCCGGATTCCTTCTTATCGGCGCGTNNGAAG
AATTNCTCCCACCACGAGGTGCTGAATATAATGACACCTTACTGCTTCAT
TCTTCATTTTCCCCCCAAAAAAAGTTCCGAAACCTGTCTCTGAGTAAACG
TCATGGCTATGGCCTCAATGGTGTGATTAGCCGGATCCTCCCACCCCCAG
GTTCGCCCTGTGGGAAGCTGCGCACTCAGTGGCCCAAACCGCTTGAAGAC
CCCTACCAAGAAATGAGTTGCTGCGGCTCGACTCTGGTCTCGCTGTTAGA
GGCCAAGAAGGGTCTGCCTAGCCTAAGACTACCCTGCGAGCTATGGTTGA
TCTCCGTCCTCCACGTGTGGTGGCTGGGCCCTTTGCTCGCTGGGTACCTG
CTGATGCCACTCACATCAAGATTGGTCCTCCTGCTCCACCCTCTGGCGGA
TTGCCTGCATCGATGAACGCCTGCGATCCTACACACCTGGATCTGCCTGT
GAACGAGAAGTTCTTCCTACTGCCGCTAAGCCCTCCCCAGATGGCATAGA
TACCGCAGGCCTCAGCACTCGACCTACTGAGTGTCGAAGCATTTCTTAAA
CTGCACGACTGAGCCTACTGGCGGAAATGATCTCGTCTGGCGGCATCACA
CCCTCGCTATGAGCTCCTCACTATCATTTCTGCTATGCCCATAGATGAGA
TACAATCCCTCGAGAGCCACCCTGCAAAGTACTACAGACCAGCGGCCATC
TCTGACATGCCGGAATGATTATAAGCCCGTCTGAAGCGGATAACTCTTTG
CTGAGACTGCTCTACCCTGACCATGTCCTCT
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