EY659746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROC3_ARATH (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 5.417e-73 Identity = 147/251 (58.57%), Postives = 175/251 (69.72%), Query Frame = 3 Query: 138 SSFTTFVAQTSDWADQEEDKDNTTITLXXXXXXXXXXXXXXXXXGADETEGNLSDWGEPEGEDTVVXXXXXXXXXXXXXXXXXXXXXXXXXDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 S F +FVAQTSDWA EE + + D +EG++S+ E EG+ + +AKLFVGNL YDV+S+ LAMLFE+AGTVEIAEVIYNRETD+SRGFGFVTMS+V+EAE AVE F+RYD++GRLLTVNKAAPRG++PERAPRV EP FR+YVGNLPW+VDN RLEQ+FSEHGKVV ARV YDRETGRSRGFG TM+ ELN+AI+ALDG+ Sbjct: 72 SPFVSFVAQTSDWA--EEGGEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVS------------EGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQ 308 HSP 2 Score: 81.6481 bits (200), Expect = 6.731e-15 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 653 +++VGNLP+DVD+ +L LF + G V A V+Y+RET RSRGFGFVTMS V+E +A+ +++GR + VN A R Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEER 323
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROC3_NICSY (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 8.095e-69 Identity = 123/160 (76.88%), Postives = 148/160 (92.50%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 DAKLFVGNLPYD+DSE LA LF++AG VEIAEVIYNRETDRSRGFGFVTMSTVEEA+KAVE++ +YD++GRLLTVNKAAPRG++PERAPR +P +RIYVGN+PW++D+ARLEQVFSEHGKVV+ARV +DRE+GRSRGFG TM+SE E+++AIA LDG+ Sbjct: 96 DAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQ 255 HSP 2 Score: 74.7146 bits (182), Expect = 8.228e-13 Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 653 +++VGN+P+D+D +L +F + G V A V+++RE+ RSRGFGFVTMS+ E +A+ +DGR + VN A R Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEER 270
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROC4_NICSY (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 1.381e-68 Identity = 127/160 (79.38%), Postives = 144/160 (90.00%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGR 890 DAKLFVGNLPYDVDSE LA LFE+AG VEIAEVIYNR+TD+SRGFGFVTMSTVEEAEKAVEM++RYD++GRLLTVNKAA RG +PER PR E +RIYVGN+PW +D+ARLEQ+FSEHGKVV+ARV YDRETGRSRGFG TMASE E++DAIA LDG+ Sbjct: 135 DAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQ 294 HSP 2 Score: 74.3294 bits (181), Expect = 1.075e-12 Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 653 +++VGN+P+ +D +L LF + G V A V+Y+RET RSRGFGFVTM++ E A+ +DGR + VN A R Sbjct: 231 RIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDR 309
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROC1_SPIOL (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 4.911e-66 Identity = 130/169 (76.92%), Postives = 146/169 (86.39%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR-VVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDGRIWMGEHQR 914 +AKLFVGNLPYDVDSEKLA +F+ AG VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE+ + YD+DGR LTVNKAAPRG+ PERAPR EP R+YVGNLPW+VD +RLEQ+FSEHGKVV+ARV DRETGRSRGFG TM+SE+E+NDAIAALDG+ G R Sbjct: 54 EAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGS-PERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVR 221 HSP 2 Score: 77.411 bits (189), Expect = 1.269e-13 Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 674 +++VGNLP+DVD+ +L LF + G V A V+ +RET RSRGFGFVTMS+ E A+ +DGR + VN A R P RA Sbjct: 150 RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEER---PRRA 232
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROC1_NICSY (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 4.187e-41 Identity = 88/166 (53.01%), Postives = 111/166 (66.87%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP-------ERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDG 887 D K+FVGNLP+ DS LA LFE+AG VE+ EVIY++ T RSRGFGFVTMS+ EE E A + F+ Y++DGR L VN P + R + R+YVGNL W VD LE +FSE GKVV+A+V YDR++GRSRGFG T +S E+N+AI +LDG Sbjct: 86 DLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDG 251 HSP 2 Score: 73.559 bits (179), Expect = 1.833e-12 Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 653 +++VGNL + VD + L LF + G V A+V+Y+R++ RSRGFGFVT S+ EE A+E D++GR + V+ A R Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEAR 267
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROC1_ARATH (Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 4.187e-41 Identity = 92/178 (51.69%), Postives = 114/178 (64.04%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---RAPRV----------------VEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDG 887 D KLFVGNLP++VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTMS+V E E A + F+ Y++DGR L VN P + + R PR G R+YVGNL W VD+ LE +FSE GKVV ARV YDR++GRS+GFG T S E+ +AI +LDG Sbjct: 90 DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDG 267 HSP 2 Score: 68.5514 bits (166), Expect = 5.897e-11 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 653 +++VGNL + VD L LF + G V A VIY+R++ RS+GFGFVT + +E + A++ D+DGR + V++A R Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEAR 283
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROC2_NICSY (29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.591e-40 Identity = 93/186 (50.00%), Postives = 117/186 (62.90%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---------------------------RAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDG 887 D KLFVGNLP+ VDS LA LFE+AG VE+ EVIY++ T RSRGFGFVTMST EE E A + F+ Y+IDGR + VN A P + E R R V+ R+YVGNL W VD+ L+++FSE G VV+A+V YDR++GRSRGFG T +S E+NDAI +L+G Sbjct: 86 DLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNG 270 HSP 2 Score: 70.0922 bits (170), Expect = 2.027e-11 Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 653 +++VGNL + VD L LF + G V A+V+Y+R++ RSRGFGFVT S+ +E A++ + D+DGR + V+ A R Sbjct: 208 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEER 286
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROC2_NICPL (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.714e-40 Identity = 93/186 (50.00%), Postives = 117/186 (62.90%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---------------------------RAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDG 887 D KLFVGNLP+ VDS LA LFE+AG VEI EVIY++ + RSRGFGFVTMST EE E A + F+ Y+IDGR + VN A P + E R R V+ R+YVGNL W VD+ L+++FSE G VV+A+V YDR++GRSRGFG T +S E+NDAI +L+G Sbjct: 87 DLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNG 271 HSP 2 Score: 70.8626 bits (172), Expect = 1.188e-11 Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 653 +++VGNL + VD L LF + G V A+V+Y+R++ RSRGFGFVT S+ +E A++ + D+DGR + V+ A R Sbjct: 209 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER 287
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROC1_NICPL (30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 3.000e-39 Identity = 87/172 (50.58%), Postives = 110/172 (63.95%), Query Frame = 3 Query: 411 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP-------------ERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDG 887 D K+FVGNL + DS LA LFE+AG VE+ EVIY++ T RSRGFGFVTMS+ EE E A + F+ Y++DGR L VN P + R + R+YVGNL W VD LE +FSE GKVV+A+V YDR++GRSRGFG T +S E+N+AI +LDG Sbjct: 86 DLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDG 257 HSP 2 Score: 73.559 bits (179), Expect = 1.833e-12 Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 653 +++VGNL + VD + L LF + G V A+V+Y+R++ RSRGFGFVT S+ EE A+E D++GR + V+ A R Sbjct: 195 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEAR 273
BLAST of EY659746 vs. ExPASy Swiss-Prot
Match: ROC5_NICSY (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.112e-28 Identity = 67/165 (40.61%), Postives = 101/165 (61.21%), Query Frame = 3 Query: 417 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPE---RAPRVVEPGF-----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALD 884 +L+VGNLP+ + S +L+ +F +AGTV E++Y+R TDRSRGF FVTM +VEEA++A+ +F + GR + VN PRG + E R GF ++YV NL W + + L F++ ++A+V YDR +GRSRGFG T +S +N A+ ++ Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMN 279 HSP 2 Score: 72.4034 bits (176), Expect = 4.083e-12 Identity = 39/112 (34.82%), Postives = 57/112 (50.89%), Query Frame = 3 Query: 552 VTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVVEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVXYDRETGRSRGFGLXTMASETELNDAIAALDG 887 + +ST VE+ D + L+ + + ER G R+YVGNLP+ + +++L ++F+E G V N + YDR T RSRGF TM S E +AI DG Sbjct: 66 IFLSTCASVSDGVEVVQEDDEEEVALSAEEEEEIEEKEERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDG 177 The following BLAST results are available for this feature:
BLAST of EY659746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 151
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659746 ID=EY659746; Name=EY659746; organism=Citrus sinensis; type=EST; length=919bpback to top |