EY659734

Overview
NameEY659734
Unique NameEY659734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659734 vs. ExPASy Swiss-Prot
Match: U396_DICDI (UPF0396 protein OS=Dictyostelium discoideum GN=DDB_G0269284 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.009e-35
Identity = 77/154 (50.00%), Postives = 112/154 (72.73%), Query Frame = 1
Query:  145 QKMDDGAKQAEINAEVLKFKEMIESQKKPALDNEPAVGPMPLPRAEGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSAEEIQKFESLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKATREHKVMADLQRLVQRHIGQD 606
            +K  D  K++  +A +  ++E +E Q +   + +  +GP P+   +   SYGGA+ PGE +AIAQ+V++ KRIPRRGEVGL++E+I  FE  GYVMSGSRH+RMNA+RIRKE+QVYSAE+++ALAM N EEKA RE++++AD + L+   +  D
Sbjct:  362 KKRHDHHKESVHDASM--WEEKVEQQTQTLSNRD--IGPKPISEVQVG-SYGGAMMPGEAEAIAQFVKENKRIPRRGEVGLTSEQIASFEETGYVMSGSRHRRMNAVRIRKESQVYSAEEQKALAMLNREEKAKRENRLLADFRDLINTKLQAD 510          
BLAST of EY659734 vs. ExPASy Swiss-Prot
Match: NKAP_RAT (NF-kappa-B-activating protein OS=Rattus norvegicus GN=Nkap PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.149e-32
Identity = 64/101 (63.37%), Postives = 84/101 (83.17%), Query Frame = 1
Query:  289 ISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSAEEIQKFESLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKATREHKVMADLQRLVQR 591
            ++YG AL PGEG A+A+YV+ GKRIPRRGE+GL++EEI  FE  GYVMSGSRH+RM A+R+RKENQ+YSA++KRALA FN EE+  RE+K++A  + +V R
Sbjct:  307 LNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIASFECSGYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASFREMVYR 407          
BLAST of EY659734 vs. ExPASy Swiss-Prot
Match: NKAP_MOUSE (NF-kappa-B-activating protein OS=Mus musculus GN=Nkap PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.149e-32
Identity = 64/101 (63.37%), Postives = 84/101 (83.17%), Query Frame = 1
Query:  289 ISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSAEEIQKFESLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKATREHKVMADLQRLVQR 591
            ++YG AL PGEG A+A+YV+ GKRIPRRGE+GL++EEI  FE  GYVMSGSRH+RM A+R+RKENQ+YSA++KRALA FN EE+  RE+K++A  + +V R
Sbjct:  307 LNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIASFECSGYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASFREMVYR 407          
BLAST of EY659734 vs. ExPASy Swiss-Prot
Match: NKAP_HUMAN (NF-kappa-B-activating protein OS=Homo sapiens GN=NKAP PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.149e-32
Identity = 64/101 (63.37%), Postives = 84/101 (83.17%), Query Frame = 1
Query:  289 ISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSAEEIQKFESLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKATREHKVMADLQRLVQR 591
            ++YG AL PGEG A+A+YV+ GKRIPRRGE+GL++EEI  FE  GYVMSGSRH+RM A+R+RKENQ+YSA++KRALA FN EE+  RE+K++A  + +V R
Sbjct:  307 LNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIASFECSGYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASFREMVYR 407          
BLAST of EY659734 vs. ExPASy Swiss-Prot
Match: U396_DROME (UPF0396 protein CG6066 OS=Drosophila melanogaster GN=CG6066 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.242e-32
Identity = 67/122 (54.92%), Postives = 92/122 (75.41%), Query Frame = 1
Query:  223 KKPALDNEPAVGPMPLPRAE-GHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSAEEIQKFESLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKATREHKVMADLQRLV 585
            K+ A  N+  VGP   P        +G AL PGEG A+A Y+ +GKRIPRRGE+GL+++EI  FES+GYVMSGSRH+RM A+RIRKENQ+YSA++KRALAMF+ EE+  RE+K+++  + ++
Sbjct:  332 KESASHNDEDVGPSLRPGGSLNQKDFGKALLPGEGAAMAAYIAEGKRIPRRGEIGLTSDEIANFESVGYVMSGSRHRRMEAVRIRKENQLYSADEKRALAMFSKEERQKRENKILSQFKDMI 453          
BLAST of EY659734 vs. ExPASy Swiss-Prot
Match: NKAPL_HUMAN (NKAP-like protein OS=Homo sapiens GN=NKAPL PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.577e-31
Identity = 64/104 (61.54%), Postives = 83/104 (79.81%), Query Frame = 1
Query:  280 EGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSAEEIQKFESLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKATREHKVMADLQRLVQR 591
            E  + YG AL PGEG A+A+YV+ GKRIPRRGE+GL++EEI  FE  GYVMSGSRH+RM A+R+RKENQ+YSA++KRALA FN EE+  RE K++A  + +V +
Sbjct:  291 EKPLKYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIGSFECSGYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRESKILASFREMVHK 394          
BLAST of EY659734 vs. ExPASy Swiss-Prot
Match: U396_USTMA (UPF0396 protein UM04995 OS=Ustilago maydis GN=UM04995 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.991e-31
Identity = 69/133 (51.88%), Postives = 93/133 (69.92%), Query Frame = 1
Query:  202 KEMIESQKKPALDNEPAVGP-MPLPRAEGHI----SYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSAEEIQKFESLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKATREHKVMADLQRLV 585
            K   +S    A D++  VGP +P   A+G      +YGGAL PGEG A+A YVQ GKRIPRRGE+GL++++I+ +E  GYVMSGSRH RMNA+R+RKENQV SAE+KR +     EEKA +E ++++  + LV
Sbjct:  434 KSRRDSVSASASDSDVEVGPTLPTVAADGKPVDPRAYGGALLPGEGSAMASYVQDGKRIPRRGEIGLTSDQIEAYEKAGYVMSGSRHHRMNAVRMRKENQVISAEEKRTMLRLQAEEKAKKEREIVSQFKELV 566          
The following BLAST results are available for this feature:
BLAST of EY659734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
U396_DICDI4.009e-3550.00UPF0396 protein OS=Dictyostelium discoideum GN=DDB... [more]
NKAP_RAT4.149e-3263.37NF-kappa-B-activating protein OS=Rattus norvegicus... [more]
NKAP_MOUSE4.149e-3263.37NF-kappa-B-activating protein OS=Mus musculus GN=N... [more]
NKAP_HUMAN4.149e-3263.37NF-kappa-B-activating protein OS=Homo sapiens GN=N... [more]
U396_DROME9.242e-3254.92UPF0396 protein CG6066 OS=Drosophila melanogaster ... [more]
NKAPL_HUMAN1.577e-3161.54NKAP-like protein OS=Homo sapiens GN=NKAPL PE=1 SV... [more]
U396_USTMA5.991e-3151.88UPF0396 protein UM04995 OS=Ustilago maydis GN=UM04... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659734 ID=EY659734; Name=EY659734; organism=Citrus sinensis; type=EST; length=856bp
GGGCAGTTAACTGAACAATCTGATGCCAGTCAGTCTTCTGATGATGATAA
TGGGAAATTGAATAAGCCCCCGCTTTCTCTGTCTAAACGGAGTAAGAAAG
AGCAGAAGTCAGAAAGTGAGAGTGATGAGAGTTTAGGTTCTGAACAGAAA
ATGGACGATGGGGCTAAGCAGGCTGAAATCAATGCTGAGGTGCTCAAGTT
TAAGGAAATGATTGAGTCTCAGAAGAAGCCAGCTTTAGATAATGAACCGG
CGGTGGGTCCAATGCCACTGCCTAGAGCTGAAGGGCATATTAGTTATGGT
GGTGCACTTAGGCCTGGAGAAGGTGATGCCATTGCACAGTACGTGCAGCA
AGGGAAGCGTATACCACGAAGAGGTGAAGTGGGTCTATCTGCTGAGGAGA
TTCAGAAATTTGAGAGTCTTGGGTATGTGATGAGTGGTAGTAGGCATCAG
AGAATGAATGCTATTCGTATTAGGAAGGAAAACCAGGTTTATAGTGCAGA
GGACAAGCGAGCATTAGCAATGTTTAACTATGAGGAGAAGGCAACACGCG
AGCATAAGGTTATGGCTGATTTGCAGCGCCTGGTGCAGCGTCATATTGGG
CAGGATGTTGGTCCTACCCATGATCCTTTCGGTGGAAAAGACCGTGGTGA
AACTTGATGCTCTTGTACGTTCAATATTAGCTATGTTGTTGCCTTTATAT
TTTCTGGTTTATGGAGTGGATTTTACTGAAAAATTGGATGCATATTCATA
ATTTAATGGGTGGCTGTCAACTTTCCTTCTAAAAAAAAAAAAAAAAAAAA
AAAAGGGCGCCGCCCTAAGGATCCCAGCTACGACCGGGGATGGGAAGTCT
AGCTCC
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