EY659699

Overview
NameEY659699
Unique NameEY659699
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7400 contig Csv1_Contig7400:23..952. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659699 vs. ExPASy Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.117e-16
Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 1
Query:  157 LKLGACAGVLGT--NVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKC 384
            LKLG CA VL    NV +GSPP   CC++L GL  +EAA+CLC AIKAN+L   LN P  + L+L+ C + +P GF+C
Sbjct:   59 LKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALSLVLNNCGKQVPNGFEC 136          
BLAST of EY659699 vs. ExPASy Swiss-Prot
Match: CCDP_MAIZE (Cortical cell-delineating protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = 1
Query:  157 LKLGACAGVLGTNVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKC 384
            LKL  CA VLG  V VG P Y QCC +L GL +++AALCLC AIKANVL I LN P ++  IL+ C R  P  F C
Sbjct:   53 LKLKVCAKVLGL-VKVGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVLGIHLNVPLSLNFILNNCGRICPEDFTC 127          
The following BLAST results are available for this feature:
BLAST of EY659699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
14KD_DAUCA2.117e-1652.5614 kDa proline-rich protein DC2.15 OS=Daucus carot... [more]
CCDP_MAIZE2.340e-1556.58Cortical cell-delineating protein OS=Zea mays PE=2... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659699 ID=EY659699; Name=EY659699; organism=Citrus sinensis; type=EST; length=929bp
CCACGCGTCCGCAACAAGCTTGCTGCTGCCATTTTTGTGCTCTCTGTTCT
TTTATCCACAACAATGTCCAGTGCTTGTGGCTCGTGCAACCCTTCACCAC
ACAGGCCGCCGGCCGCTACGCCTCCGCCGGCTACGGCATATTGCCCCACG
AACACGTTGAAGCTTGGAGCTTGTGCAGGAGTTCTTGGAACTAATGTTGC
TGTAGGAAGCCCACCTTACAGCCAGTGCTGTGCTATACTTGGCGGCTTGG
GTGAAGTCGAAGCTGCGCTGTGTCTTTGCCTTGCTATAAAAGCCAATGTT
CTTGCGATTGAATTGAACTGGCCAACTAATATTGGGCTCATCCTTAGTCT
TTGCAACAGGCCAATTCCCGCAGGCTTCAAATGTGCATAAGAAGCTGAAA
TGCATATTTCTAGTAAATCAATGCTCCAATTAACTAGGAAGAGATTTTTT
TTTTTTTTTTTTTTTGTTGGGTCTATTTCTAGTACCGTGTACGTTCATTG
TTTTAATTTGCTAATAACTAGGCAAGACTGTTTGCCTATGCTAGTTGTGA
TGTGTGTACGCATTAATGTTGTGACTTAATTAATAATTAAAATCATTCTT
CTTTATTTCGCAAAAAAAAAAAAAAAAAAAAAAGGCACGTCAAGCATATC
TGATAGGAAATAAGGCCCTANCAAAGGAACTGAGTGTGAAAAGACAGCTG
CATAATATGCAAATGAAGGCAGCTCATGGGAAGGCTCAAGAATCTATTAT
CGCCAAAGGAACCCAGNTGAGNTGCAGGCAATGGGAGAGGACGGATCGGA
TGATAAACCTGCACGGGCTTCATGAAAGTGAAGCATTCACGTCCCAAGCA
TGAATGAGTGTTCTGAGGAGCCAGCCCGGGCGCCGGTCACGTCTGCGGGT
TATTATGTGTTGGACAGACACAACTAGGG
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