EY659676

Overview
NameEY659676
Unique NameEY659676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659676 vs. ExPASy Swiss-Prot
Match: ILR3_ARATH (Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 7.323e-65
Identity = 139/239 (58.16%), Postives = 156/239 (65.27%), Query Frame = 1
Query:  130 MVSPENTNWLLDYPLIDDITVPDGNFSVSASGFTWTVQPPINGPSNGCVEIDSAFGDSNGLXXXXXXXXXXXXXXXXXX-KACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQMLKAEKEKIEQXLKAMSTP-PSFL-TPXXCIXXXXXXXXXXXXNKLMPFISYPGSRMWHXMPPAAVDTLTDHVLRPPGA 837
            MVSPEN NW+ D  LID      G+F++   GF+W VQ PI   SN    +D + G+S                      KACREK RRDRLNDKF+EL +ILEPG PPKTDKAAIL+DAVRMVTQLR EAQKLKDSNSSLQ+KIKELK EKNELRDEKQ LK EKEK+EQ LKAM+ P PSF   P                NK++P ISYPG  MW  MPPA+VDT  DHVLRPP A
Sbjct:    1 MVSPENANWICD--LID---ADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEASKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA 234          
BLAST of EY659676 vs. ExPASy Swiss-Prot
Match: BH115_ARATH (Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.892e-58
Identity = 131/239 (54.81%), Postives = 148/239 (61.92%), Query Frame = 1
Query:  130 MVSPENTNWLLDYPLIDDITVPDGNFSVSASGFTWTVQPPINGPSNGCVEIDSAFGDSNGLXXXXXXXXXXXXXXXXXX-KACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQMLKAEKEKIEQXLKAMSTPPSFLTPXXCI--XXXXXXXXXXXXNKLMPFISYPGSRMWHXMPPAAVDTLTDHVLRPPGA 837
            MVSPENTNWL DYPLI+      G FS     F W     I+G +   VE+D    D++ +                   KACREK RRDRLNDKF EL+S+LEPGR PKTDK AI+ DA+RMV Q R EAQKLKD NSSLQEKIKELK EKNELRDEKQ LK EKE+I+Q LKA+ T P    P  C               +KL+PF +YPG  MW  MPPAAVDT  DHVLRPP A
Sbjct:    1 MVSPENTNWLSDYPLIE------GAFSDQNPTFPWQ----IDGSATVSVEVDGFLCDADVIKEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQ---PQPCFLPNPQTLSQAQAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 226          
BLAST of EY659676 vs. ExPASy Swiss-Prot
Match: BH104_ARATH (Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.474e-38
Identity = 83/157 (52.87%), Postives = 107/157 (68.15%), Query Frame = 1
Query:  367 KACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQMLKAEKEKIEQXLKAMSTPPSFLTPXXCIXXXXXXXXXXXXNKLMPFISYPGSRMWHXMPPAAVDTLTDHVLRPPGA 837
            KACRE+LRR++LN++F++L+S+LEPGR PKTDK AIL DA+R++ QLR EA KL+++N  L E+IK LKAEKNELR+EK +LKA+KEK EQ LK+M+ P S   P                NK+  + SY    MWH MP +  DT  D  LRPP A
Sbjct:  135 KACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSGFIP--------HIPAAFNHNKMAVYPSYGYMPMWHYMPQSVRDTSRDQELRPPAA 283          
BLAST of EY659676 vs. ExPASy Swiss-Prot
Match: BH034_ARATH (Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.347e-34
Identity = 82/158 (51.90%), Postives = 103/158 (65.19%), Query Frame = 1
Query:  367 KACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQMLKAEKEKIEQXLKAMSTP-PSFLTPXXCIXXXXXXXXXXXXNKLMPFISYPGSRMWHXMPPAAVDTLTDHVLRPPGA 837
            KACREKLRR++LNDKF++L+S+LEPGR PKTDK+AIL DA+R+V QLR EA +L+++N  L E+IK LKA+KNELR+EK +LKAEKEK+EQ LK+M  P P F+                      P    P   MW  +PPA  DT  D    PP A
Sbjct:  167 KACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVVPSPGFMPSQHPAAFHSHKMAVAYPYGYYP----PNMPMWSPLPPADRDTSRDLKNLPPVA 320          
BLAST of EY659676 vs. ExPASy Swiss-Prot
Match: BH121_ARATH (Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.717e-18
Identity = 54/122 (44.26%), Postives = 77/122 (63.11%), Query Frame = 1
Query:  367 KACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQMLKAEKEKI----EQXLKAMS-------------TPPSFLTP 681
            KA REKLRR++LN+ FVEL ++L+P RP K DKA IL D V+++ +L SE  KLK   ++L ++ +EL  EKN+LR+EK  LK++ E +    +Q L++MS              PPSF  P
Sbjct:   63 KAGREKLRREKLNEHFVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAPPPSFPYP 183          
BLAST of EY659676 vs. ExPASy Swiss-Prot
Match: BH011_ARATH (Transcription factor bHLH11 OS=Arabidopsis thaliana GN=BHLH11 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.505e-14
Identity = 39/87 (44.83%), Postives = 63/87 (72.41%), Query Frame = 1
Query:  367 KACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQMLKAEKE 627
            KA REKLRRD+L ++F+EL + L+P RP K+DKA++L D ++M+  + ++  +LK    +L ++ +EL  EK+ELR+EK  LK++ E
Sbjct:   49 KAEREKLRRDKLKEQFLELGNALDPNRP-KSDKASVLTDTIQMLKDVMNQVDRLKAEYETLSQESRELIQEKSELREEKATLKSDIE 134          
The following BLAST results are available for this feature:
BLAST of EY659676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ILR3_ARATH7.323e-6558.16Transcription factor ILR3 OS=Arabidopsis thaliana ... [more]
BH115_ARATH3.892e-5854.81Transcription factor bHLH115 OS=Arabidopsis thalia... [more]
BH104_ARATH4.474e-3852.87Transcription factor bHLH104 OS=Arabidopsis thalia... [more]
BH034_ARATH1.347e-3451.90Transcription factor bHLH34 OS=Arabidopsis thalian... [more]
BH121_ARATH6.717e-1844.26Transcription factor bHLH121 OS=Arabidopsis thalia... [more]
BH011_ARATH4.505e-1444.83Transcription factor bHLH11 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-H05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659676 ID=EY659676; Name=EY659676; organism=Citrus sinensis; type=EST; length=941bp
TACAATTCCCTCAAAATTCTACACGCAGATTCCCCATTCTCCTCTTTCTT
CGAAACTCAACCGCTGTTTGTTTCCCAGGAAAATTTCTCTCCGCCGGAAA
ACCCATAAATATTATCCTGGAAATTCAAAATGGTTTCTCCGGAAAATACG
AATTGGCTATTAGATTACCCCTTGATCGACGATATCACTGTCCCTGATGG
CAATTTCTCCGTTTCCGCTTCGGGTTTCACTTGGACCGTTCAGCCGCCAA
TTAACGGGCCGTCAAATGGCTGTGTGGAAATTGATTCTGCATTTGGGGAT
TCAAATGGTCTCAAGGAAAGCTCAAAAAAGAGGGTTAGATCAGAATCATG
TGGGTCTTCTAGCTCCAAGGCGTGCAGGGAAAAGTTGCGTAGGGATCGTC
TTAATGACAAGTTTGTGGAGTTAGCCTCTATCTTAGAGCCTGGAAGGCCC
CCCAAAACAGATAAGGCAGCTATTCTGATTGATGCCGTCCGGATGGTGAC
TCAATTACGCAGTGAAGCCCAGAAGTTGAAGGACTCAAATTCAAGTCTCC
AGGAGAAGATCAAAGAGTTGAAGGCTGAGAAGAATGAGCTTCGTGATGAG
AAGCAGATGCTAAAGGCAGAGAAAGAGAAGATAGAGCAGNCACTCAAAGC
TATGAGCACCCCACCCAGTTTCTTAACTCCTNCTNNCTGCATCCCTGCTG
CATTTGCTGCCCAAGGCCAAGCACCTGGAAACAAGCTGATGCCTTTCATC
AGCTACCCTGGNAGTCGCATGTGGCATTNCATGCCTCCTGCTGCAGTGGA
TACCCTCACAGATCATGTACTCCGTCCTCCGGGTGCTTAGTATGCAACCT
ACATGATTTGGGGTTGCATTTGCACCAACAGGGAATNCGTTAATCATGGT
CCCTGACTGAATAANNTTTCCGAAGTCTTATGATTGGTGGG
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