EY659632

Overview
NameEY659632
Unique NameEY659632
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: HIBCH_BOVIN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.862e-36
Identity = 97/273 (35.53%), Postives = 152/273 (55.68%), Query Frame = 2
Query:   77 FLSFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLEVVYRM-YWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPGHLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPELEKRLIGLNTGDEIAVKSGIEKFSEMSSL-MDKCXK*AVYMDE---WFSKEN*TQILNSL 877
            F S++  N+++  +      +   +V+L E  G   ++TLNRPR LN ++  ++  +   L+KWE+D +  L+I+KG G +AF AGGD++   + RN+    L+ ++R  Y L + I + +K  +AL HGITMGG   + V  +F V TEK+VF+ PE +IG   D G  +   RL G L  FLAL    L G+++  AG+ THFV  EKL  LE+ L+ L +  +  +   +E +   S    DK      +MD+   WFS     QI+++L
Sbjct:   13 FNSYKRTNIILQHLKMSNHTDAAAEVLL-ERKGCAGVITLNRPRFLNTLTLGMIRQIYAQLKKWEQDPKTFLIIIKGAGEKAFCAGGDIRALSEARNTNQKMLQDLFREEYILNNAIDSCQKPYIALIHGITMGGGVGVSVHGQFRVATEKSVFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDFEKLGMLEEDLLALKSPSKENIADVLETYHAKSKTDQDKPFILEEHMDKINSWFSANTVEQIVDNL 284          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: HIBCH_SCHPO (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Schizosaccharomyces pombe GN=ehd3 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.044e-36
Identity = 96/272 (35.29%), Postives = 143/272 (52.57%), Query Frame = 2
Query:    8 FILSLSSLDTVLFNKTYKFLSVLFLSFESANLLID*MAQGVVKNP------DEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVGRAFSAGGDLKM----FYDGRNSKDSCLEVVYRMYWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPGHLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPELEKRLIGLNTGDEIAVKSGIEKFSEMSS 793
            F+L  S L T + N         FLS  +++     M++  ++NP          VL E     R+ TLNRP+ LN I+  ++  +   L   E+ + AK++I+KG GR+FS+GGD+K       DG+  +        + Y L H + TY+K  VAL +GITMGG + L + + F +  E T+F+ PE  IG+ TD   SF  SRLPG+   +L L    + G + +  G+ THFVP    P LE RL  LNT D   + + I +F+E +S
Sbjct:   16 FMLRQSLLKTSVSN---------FLSLNASST----MSRAFIRNPKFYSTSSNDTVLYESKNGARIFTLNRPKVLNAINVDMIDSILPKLVSLEESNLAKVIILKGNGRSFSSGGDIKAAALSIQDGKLPE--VRHAFAQEYRLSHTLATYQKPVVALMNGITMGGGSGLAMHVPFRIACEDTMFAMPETGIGYFTDVAASFFFSRLPGYFGTYLGLTSQIVKGYDCLRTGIATHFVPKHMFPHLEDRLAELNTSDISKINNTILEFAEFAS 272          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: HIBCH_DANRE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio GN=hibch PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.604e-36
Identity = 86/216 (39.81%), Postives = 126/216 (58.33%), Query Frame = 2
Query:  155 VLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLEVVYRM-YWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPGHLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPELEKRLIGLNTGDEIAVKSGIEKFSEMSSL 796
            VL E++G   ++TLNRP+ LN ++  ++  +   L+KW+KD +  +VI+KG G +AF AGGD++   +   + +   +V +R  Y L + I TY+K  VAL +GITMGG   L V  +F V TEKT+F+ PE  IG   D G  +   RL G L  FLAL    L G+++   G+ THFV SEK+  LEK L+ L +     V   ++ + E S L
Sbjct:   34 VLFEKVGKAGVITLNRPKALNALTLNMIRHIYPQLKKWDKDSETDIVIIKGAGEKAFCAGGDIRAIAEAGKAGNLLSQVFFREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHGQFRVATEKTLFAMPETGIGLFPDVGGGYFLPRLQGKLGLFLALTGFRLKGRDVQRVGVATHFVQSEKIESLEKDLVDLKSPSISDVAQLLDSYQEQSHL 249          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: HIBCH_HUMAN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.917e-35
Identity = 96/273 (35.16%), Postives = 151/273 (55.31%), Query Frame = 2
Query:   77 FLSFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLEVVYRM-YWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPGHLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPELEKRLIGLNTGDEIAVKSGIEKFSEMSSL-MDKCXK*AVYMDE---WFSKEN*TQILNSL 877
            F +F+  N ++  +      +  E+V+L E+ G   ++TLNRP+ LN ++  ++  +   L+KWE+D +  L+I+KG G +AF AGGD+++  +   +K     V +R  Y L + + + +K  VAL HGITMGG   L V  +F V TEK +F+ PE +IG   D G  +   RL G L  FLAL    L G+++  AG+ THFV SEKL  LE+ L+ L +  +  + S +E +   S +  DK      +MD+    FS     +I+ +L
Sbjct:   13 FNAFKRTNTILHHLRMSKHTDAAEEVLL-EKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENL 284          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: HIBCH_CHICK (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.513e-35
Identity = 85/197 (43.15%), Postives = 117/197 (59.39%), Query Frame = 2
Query:  155 VLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLEVVYRM-YWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPGHLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPELEKRLIGLNT 739
            VL ++ G   ++TLNRP+ LN +S K++  +   ++ WE+D +  L+I+KG G +AF AGGD++   D   + D+     +R  Y L + I T KK  VAL  GITMGG   L V   F V TEKTVF+ PE +IG   D G  +   RL G +   LAL    L G++++ AG+ THFV S KLPELEK LI L +
Sbjct:   37 VLLQKQGGAGIITLNRPKVLNALSFKMIQQIYPQIKAWEQDPETFLIIIKGTGEKAFCAGGDVRAIADAGKAGDTMTRDYFREEYRLDNAIGTCKKPYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIGLFPDVGGGYFLPRLSGKIGHLLALTGFRLKGRDVLKAGIATHFVESGKLPELEKDLIALKS 233          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: HIBCH_XENTR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.052e-33
Identity = 87/224 (38.84%), Postives = 126/224 (56.25%), Query Frame = 2
Query:  173 GNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLEVVYRM-YWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPGHLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPELEKRLIGLNTGDEIAVKSGIEKFSEMS-SLMDKCXK*AVYMDE 835
            G   ++TLNRP+ LN ++  ++ L+   L  WE+D +  LVI+KGVG +AF AGGD++   D   + D   +  +R  Y L + I TYKK  VAL  GITMGG   L V   F V +E T+F+ PE +IG   D G  +   RLPG L  +LAL    L G ++  AG+ THFV SEK+P LE+ L+ +    +  V   ++ +   S +  DK    A ++D+
Sbjct:   43 GCAGVITLNRPKALNALNLGMIRLIYPQLGLWEEDPETYLVIIKGVGGKAFCAGGDIRAVTDAGKAGDRLAQDFFREEYILNNAIGTYKKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMPETAIGLFPDVGGGYFLPRLPGKLGLYLALTGFRLKGSDVQKAGIATHFVESEKIPSLEQDLVAMKCPSKENVADVLDSYHNKSYAAQDKPFVLAEHLDK 266          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: HIBCH_RAT (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 2.343e-33
Identity = 97/273 (35.53%), Postives = 146/273 (53.48%), Query Frame = 2
Query:   77 FLSFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLEVVYRM-YWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPGHLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPELEKRLIGLNTGDEIAVKSGIEKFSEMSSL-MDKCXK*AVYMDE---WFSKEN*TQILNSL 877
            F S   A++++  +     K+ +   VL E  G   ++TLNRP+ LN +S  ++  +   L+KWE+D    L+I+KG G +AF AGGD+K   + + +  +  + ++R  Y L + I + +K  VAL  GITMGG   L V  +F V TE+++F+ PE  IG   D G  +   RL G L  FLAL    L G+++  AG+ THFV SEKL  LE+ L+ L +     V   +E +   S +  DK      +MD+    FS     QIL +L
Sbjct:   13 FSSIRRASVILQHLRMS--KHTETAEVLLERRGCAGVITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAGQTLSQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHRAGIATHFVDSEKLHVLEEELLALKSPSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKINSCFSANTVEQILENL 283          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: HIBCH_MOUSE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.383e-32
Identity = 95/271 (35.06%), Postives = 145/271 (53.51%), Query Frame = 2
Query:   83 SFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLEVVYRM-YWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPGHLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPELEKRLIGLNTGDEIAVKSGIEKFSEMSSL-MDKCXK*AVYMDE---WFSKEN*TQILNSL 877
            SF  A++++  +   +     E  VL E  G   ++TLNRP+ LN +S  ++  +   L+ WE+D    L+I+KG G +AF AGGD+K   + + ++ +  + ++R  Y L + I + +K  VAL  GITMGG   L V  +F V TE+++F+ PE  IG   D G  +   RL G L  FLAL    L G+++  AG+ THFV SEKL  LE+ L+ L +     V   +E +   S +  DK      +MD+    FS     QI+ +L
Sbjct:   15 SFRRASVILQHLRMSMHTEAAE--VLLERRGCGGVITLNRPKFLNALSLNMIRQIYPQLKTWEQDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKARQNLTQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGYRLKGRDVHRAGIATHFVDSEKLRVLEEELLALKSPSAEDVAGVLESYHAKSKMDQDKSIIFEEHMDKINSCFSANTVEQIIENL 283          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: HIBCH_XENLA (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.856e-30
Identity = 84/224 (37.50%), Postives = 123/224 (54.91%), Query Frame = 2
Query:  173 GNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDQAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLEVVYRM-YWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPGHLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPELEKRLIGLNTGDEIAVKSGIEKFSEMS-SLMDKCXK*AVYMDE 835
            G   ++TLNRP+ LN ++  ++  +   L+ WE+D +  LVI+KG G +AF AGGD++   D     D   +  +R  Y L + I T KK  VA+  GITMGG   L V   F V +EKT+F+ PE +IG   D G  +   RL G L  +LAL    L G ++  AG+ THFV SEKL  LE+ L+ + +  +  V   ++ + + S +  DK    A  MD+
Sbjct:   43 GCAGVITLNRPKALNALNLGMIRQIYPQLKLWEEDPETYLVIIKGAGGKAFCAGGDIRAVTDAGKVGDRLAQDFFREEYILNNAIGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKTLFAMPETAIGLFPDVGGGYFLPRLTGKLGLYLALTGFRLKGSDVQKAGIATHFVESEKLSSLEQDLVAMKSPSKENVADVLDSYQKKSYAAQDKPFVLAENMDK 266          
BLAST of EY659632 vs. ExPASy Swiss-Prot
Match: HIBCH_DICDI (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Dictyostelium discoideum GN=hibch PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.535e-27
Identity = 80/222 (36.04%), Postives = 117/222 (52.70%), Query Frame = 2
Query:  155 VLGEEIGNVRLVTLNRPRQLNVISSKVVSLLA-EYLEKWEKDDQAKLVIVKGVG-RAFSAGGDLKMFYDGRN------SKDSCLEVVY--RMYWLCHHIHTYKKTQVALAHGITMGGCASLMVPLKFSVVTEKTVFSTPEASIGFHTDCGFSFIHSRLPGHLXEFLALNWAXLNGQELVAAGLPTHFVPSEKLPELEKRLIGLNTGDEIAVKSGIEKFSEMS 790
            VL E+ G    V LNRP+ LN ++  +V +L  +YLE   K D   ++++KG G +AF AGGD++  YD +       SK + +  ++    Y L + I T    QV++ +G  MGG   L V  KF V TE TVF+ PE  IGF  D G S+   RLP +   +LAL  + L G  +  AG+ THFV +E +  LEK +          + S + K+ + S
Sbjct:   25 VLFEKKGKCLKVLLNRPKALNALNPNMVKILTPKYLEMKTKKDGEGVIVMKGAGEKAFCAGGDIRAIYDYKQLNEEQKSKTNDIGDLFFREEYILNNLIGTNPIAQVSIYNGFAMGGGIGLSVHGKFRVATENTVFAMPETGIGFFCDVGGSYFLPRLPNNYGMYLALTGSKLKGNNVYLAGVATHFVSNEHIQALEKEIEECENPTSQTINSILTKYHDKS 246          
The following BLAST results are available for this feature:
BLAST of EY659632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
HIBCH_BOVIN3.862e-3635.533-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_SCHPO5.044e-3635.293-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_DANRE8.604e-3639.813-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_HUMAN1.917e-3535.163-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_CHICK9.513e-3543.153-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_XENTR1.052e-3338.843-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_RAT2.343e-3335.533-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_MOUSE3.383e-3235.063-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_XENLA1.856e-3037.503-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_DICDI9.535e-2736.043-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659632 ID=EY659632; Name=EY659632; organism=Citrus sinensis; type=EST; length=890bp
AGTTGACTTTATCTTGTCTCTCTCTTCATTGGACACAGTGTTGTTTAACA
AAACCTACAAGTTTCTCTCTGTTCTTTTTCTTAGCTTTGAATCAGCTAAC
CTACTAATTGACTAAATGGCGCAAGGTGTTGTTAAGAACCCAGATGAGCA
GGTTGTGCTTGGAGAAGAAATAGGCAATGTGAGACTGGTCACCTTAAACC
GGCCTCGCCAATTGAATGTCATCTCATCTAAAGTGGTGTCTCTATTGGCA
GAATACTTGGAAAAATGGGAAAAAGATGACCAAGCTAAGCTTGTAATAGT
CAAGGGAGTTGGCCGAGCTTTTTCTGCTGGTGGGGATTTGAAAATGTTTT
ATGATGGGAGGAACTCAAAGGATTCCTGCCTCGAAGTGGTCTATAGAATG
TATTGGCTTTGCCATCACATTCATACCTATAAGAAAACCCAGGTAGCTCT
TGCTCATGGAATTACAATGGGAGGATGCGCGTCTTTGATGGTTCCTCTGA
AATTCTCAGTTGTCACGGAAAAAACTGTTTTTTCCACTCCAGAAGCAAGT
ATTGGATTTCATACTGATTGCGGGTTCTCATTCATCCATTCTCGTCTCCC
TGGACATTTANGGGAATTCCTGGCCTTAAACTGGGCANGGCTAAATGGGC
AGGAACTGGTTGCAGCTGGGCTACCTACCCATTTTGTCCCTTCTGAGAAA
TTGCCCGAGCTAGAAAAGCGTCTGATAGGCTTAAACACTGGTGATGAAAT
TGCAGTCAAATCTGGCATTGAGAAGTTCTCTGAGATGTCCAGCTTGATGG
ACAAATGTNCTAAATAAGCAGTCTATATGGATGAGTGGTTCTCCAAGGAA
AACTGAACCCAGATTTTAAATTCTTTGAATCCAAAGCCGG
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