EY659625
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659625 vs. ExPASy Swiss-Prot
Match: FAD6C_SOYBN (Omega-6 fatty acid desaturase, chloroplastic OS=Glycine max PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 4.338e-52 Identity = 103/184 (55.98%), Postives = 127/184 (69.02%), Query Frame = 2 Query: 149 MACILADSMFLFMGPHQRPTGSQKIGCFNSPGLCQLKWESLLVKGVKHKRCSIPSRGTRFIQXXXXXXXXXS*YSADCRKQIAQSYGFRQIGEPLPENVTMKDVIDSLPKKVFEIDDVKAWKSVLLSVSSYALGLLMISKAPWYLLPLARAWTGTAVTGLFVISHDCAHKSLSKNKVLRDIRGT 700 MAC LADS+ LF G +Q+P + I SPG+ L L+ K + +R + I SA+ RKQ+A+ YGFRQ+GEPL ++VT+KDVI+ LPK+VFEIDDVKAWKSVL+SV+SYALGL MISKAPWYLLPLA WTGTA+TG FVI HDCAH+S S NK++ DI GT Sbjct: 1 MACTLADSLLLFKGSYQKPVLRRDIAARYSPGIFSLNSNGLIQKRFRRQRNFVTRNKVTVIHAVAIPVQPAPVESAEYRKQLAEDYGFRQVGEPLSDDVTLKDVINPLPKEVFEIDDVKAWKSVLISVTSYALGLFMISKAPWYLLPLAWVWTGTAITGFFVIGHDCAHRSFSSNKLVEDIVGT 184
BLAST of EY659625 vs. ExPASy Swiss-Prot
Match: FAD6C_BRANA (Omega-6 fatty acid desaturase, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 9.046e-50 Identity = 103/185 (55.68%), Postives = 132/185 (71.35%), Query Frame = 2 Query: 149 MACILADSMFLFMGPHQRPTGSQKIGCFN-SPGLCQLKWESLLVKGVKHKRCSIPSRGTRFIQXXXXXXXXXS*YSADCRKQIAQSYGFRQIGEPLPENVTMKDVIDSLPKKVFEIDDVKAWKSVLLSVSSYALGLLMISKAPWYLLPLARAWTGTAVTGLFVISHDCAHKSLSKNKVLRDIRGT 700 MA +ADS+F F GP Q + K+ SPG+ ++ LL+KG + + I+ S +A+ R+Q+A+SYGF+QIG+ LP+NVT+KD++D+LPK+VFEIDDVKAWKSVL+SV+SYALGL MI+KAPWYLLPLA AWTGTAVTG FVI HDCAHKS SKNK++ DI GT Sbjct: 1 MASRIADSLFAFTGPQQCLPRAPKLASARLSPGVYAVRPIDLLLKGTRRTFLVPAKKRIGCIKAVFVPVAPPSADNAEDREQLAESYGFKQIGQDLPDNVTLKDIMDTLPKEVFEIDDVKAWKSVLISVTSYALGLFMIAKAPWYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSKNKLVEDIVGT 185
BLAST of EY659625 vs. ExPASy Swiss-Prot
Match: FAD6C_ARATH (Omega-6 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD6 PE=1 SV=2) HSP 1 Score: 197.208 bits (500), Expect = 1.181e-49 Identity = 108/190 (56.84%), Postives = 134/190 (70.53%), Query Frame = 2 Query: 149 MACILADSMFLFMGPHQRPTGSQKIGCFN---SPGLCQLKWESLLVKGVKHK--RCSIP-SRGTRFIQXXXXXXXXXS*YSADCRKQIAQSYGFRQIGEPLPENVTMKDVIDSLPKKVFEIDDVKAWKSVLLSVSSYALGLLMISKAPWYLLPLARAWTGTAVTGLFVISHDCAHKSLSKNKVLRDIRGT 700 MA +ADS+F F GP Q K+ + SPG+ +K LL+KG H+ RC P R I+ S SA+ R+Q+A+SYGFRQIGE LPENVT+KD++D+LPK+VFEIDD+KA KSVL+SV+SY LGL MI+K+PWYLLPLA AWTGTA+TG FVI HDCAHKS SKNK++ DI GT Sbjct: 1 MASRIADSLFAFTGPQQCLPRVPKLAASSARVSPGVYAVKPIDLLLKGRTHRSRRCVAPVKRRIGCIKAVAAPVAPPSADSAEDREQLAESYGFRQIGEDLPENVTLKDIMDTLPKEVFEIDDLKALKSVLISVTSYTLGLFMIAKSPWYLLPLAWAWTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGT 190
BLAST of EY659625 vs. ExPASy Swiss-Prot
Match: FAD6C_SPIOL (Omega-6 fatty acid desaturase, chloroplastic OS=Spinacia oleracea GN=FAD6 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.329e-44 Identity = 89/164 (54.27%), Postives = 118/164 (71.95%), Query Frame = 2 Query: 233 NSPGLCQLKWESLLVKGVKHKRCSIPSRGTR----FIQXXXXXXXXXS*Y----SADCRKQIAQSYGFRQIGEPLPENVTMKDVIDSLPKKVFEIDDVKAWKSVLLSVSSYALGLLMISKAPWYLLPLARAWTGTAVTGLFVISHDCAHKSLSKNKVLRDIRGT 700 NS G+ +KW+ ++ + H R + +GTR +Q S + + + KQ+A+ YGF+QIGEPLP++VTM+D+I SLPK+VFEI+D KAW +VL+SV+SYALG+ MI+KAPWYLLPLA AWTGTA+TG FVI HDCAHKS SKNK++ DI GT Sbjct: 27 NSAGISCIKWQRPCLRNLGHVRLNQQRKGTRRKSTLVQAVAVPVAQPSAFPPTDNTEHLKQLAERYGFQQIGEPLPDDVTMRDIITSLPKQVFEINDTKAWGTVLISVTSYALGIFMIAKAPWYLLPLAWAWTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGT 190
BLAST of EY659625 vs. ExPASy Swiss-Prot
Match: DESA_SPIPL (Fatty acid desaturase OS=Spirulina platensis GN=desA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.162e-18 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = 2 Query: 452 KDVIDSLPKKVFEIDDVKAWKSVLLSVSSYALGLLMISKAPWYLLPLARAWTGTAVTGLFVISHDCAHKSLSKNKVLRD 688 +D+I++LP VF D KAW +V+++V LG L I+ APW+LLP+ +TGTA+TG FVI HDC H+S S+N + D Sbjct: 26 EDIINTLPSGVFVQDRYKAWMTVIINVVMVGLGWLGIAIAPWFLLPVVWVFTGTALTGFFVIGHDCGHRSFSRNVWVND 104 HSP 2 Score: 27.7202 bits (60), Expect = 4.162e-18 Identity = 17/60 (28.33%), Postives = 24/60 (40.00%), Query Frame = 3 Query: 750 HD*HHAKTNMPDRDTAWPSCWKEELTHLPSWRNHYIWIWPLSTW--DGLAHWLIWPFDST 923 H+ HH TN + D AW KEE + + ++ W + HW FD T Sbjct: 125 HNQHHKYTNRMELDNAWQPWRKEEYQNAGKFMQVTYDLFRGRAWWIGSILHWASIHFDWT 184
BLAST of EY659625 vs. ExPASy Swiss-Prot
Match: DESA_SYNY3 (Fatty acid desaturase OS=Synechocystis sp. (strain PCC 6803) GN=desA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.557e-17 Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 2 Query: 440 NVTMKDVIDSLPKKVFEIDDVKAWKSVLLSVSSYALGLLMISKAPWYLLPLARAWTGTAVTGLFVISHDCAHKSLSKNKVLRDIRG 697 ++ ++D+I +LPK+ FE KAW SVL+++ + A+G L I PWY LP+ WTGTA+TG FV+ HDC H+S +K + + D+ G Sbjct: 23 DLKLQDIIKTLPKECFEKKASKAWASVLITLGAIAVGYLGIIYLPWYCLPITWIWTGTALTGAFVVGHDCGHRSFAKKRWVNDLVG 108 The following BLAST results are available for this feature:
BLAST of EY659625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659625 ID=EY659625; Name=EY659625; organism=Citrus sinensis; type=EST; length=966bpback to top |