EY659595

Overview
NameEY659595
Unique NameEY659595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7213 contig Csv1_Contig7213:555..1160. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_MARMM (Protein apaG OS=Maricaulis maris (strain MCS10) GN=apaG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.304e-27
Identity = 58/121 (47.93%), Postives = 79/121 (65.29%), Query Frame = 3
Query:   12 GIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMGD 374
            G+R+ V   Y+ED S P +G++ +AY + I N  ++PVQL+ R W+ITDANG+TE++ G+GVIGEQPVI P   F Y+S  PL TPSG M G +EM+  D    ++F   I  FSL    D
Sbjct:    8 GVRISVSPDYLEDESTPEEGRFVWAYTIEIENTGKQPVQLIARKWMITDANGRTEHVQGMGVIGEQPVIEPGGRFRYTSGAPLPTPSGFMSGSYEMRRGD---GESFAATIPDFSLDRPSD 125          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_MAGSA (Protein apaG OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=apaG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.304e-27
Identity = 59/121 (48.76%), Postives = 79/121 (65.29%), Query Frame = 3
Query:    3 TTLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            TT  I V V+  Y++D+S P    + +AYRVRI N   R VQLLRRHW+ITDA G+ + + G GV+GEQPV+ P  ++EY+S  PL TPSG M G +EM+  D      F++AI  FSL +
Sbjct:    5 TTRDIEVTVKPFYLDDQSSPGDNHFVWAYRVRIVNKGSRTVQLLRRHWVITDAIGRVQEVKGPGVVGEQPVLRPGDAYEYTSGTPLPTPSGIMVGTYEMEDED---GSAFDIAIPAFSLDS 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_RHILO (Protein apaG OS=Rhizobium loti GN=apaG PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.045e-25
Identity = 57/122 (46.72%), Postives = 79/122 (64.75%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            T  I VQVR  Y+EDRS P + +Y + Y++ I N S+  VQLL R+W ITD  G+ E + G GV+G+QP + P  S++Y+S CPLSTPSG M G + M++      +TF++AI  FSL   G
Sbjct:    6 TRNIEVQVRPFYLEDRSDPSENRYVWGYQITIDNQSDEFVQLLSRYWHITDGAGRVEEVRGPGVVGDQPELNPGDSYQYTSGCPLSTPSGIMVGHYTMRN---KRGETFDIAIPAFSLDLPG 124          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_RHISN (Protein apaG OS=Rhizobium sp. (strain NGR234) GN=apaG PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.671e-25
Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            T  I V V   Y+E++S P   +Y + YR+ I+N+SE  V+L+ R+W ITD NG+ + + G GVIGEQP++ P  ++EYSS CPL TPSG M G + M+  D    +TFNVAI  FSL + G
Sbjct:    6 TRDIEVTVEPYYLEEQSDPDDSRYVWGYRIVISNHSEIAVRLMTRYWHITDENGQVDEVSGPGVIGEQPLLNPGDTYEYSSGCPLDTPSGVMFGHYSMEAED---GETFNVAIPAFSLDSPG 124          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_AGRT5 (Protein apaG OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=apaG PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.557e-25
Identity = 57/122 (46.72%), Postives = 77/122 (63.11%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            T  I V V   Y+E++S P   +Y + Y+V I NNS+ PV+L+ R+W ITD NG+ + + G GV+GEQP + P  S+EYSS CPL TPSG M G +EM   +    + FNV I  FSL + G
Sbjct:    6 TRDIEVTVDPYYLEEQSDPDDDRYVWGYKVVIANNSDVPVKLVNRYWHITDQNGQVDEVYGPGVVGEQPQLKPGDSYEYSSGCPLDTPSGLMFGHYEM---ETENGEVFNVTIPAFSLDSPG 124          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_SINMW (Protein apaG OS=Sinorhizobium medicae (strain WSM419) GN=apaG PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.951e-25
Identity = 57/122 (46.72%), Postives = 79/122 (64.75%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            T  I V V   Y+E++S P   +Y + YR+ I N+S+  V+L+ R+W ITD NG+ + + G GVIGEQP++ P  ++EYSS CPL TPSG M G + M   +  G +TFNVAI  FSL + G
Sbjct:    6 THDIEVTVEPYYLEEQSDPDDSRYVWGYRIIIANHSDVAVRLMTRYWHITDENGQVDEVSGPGVIGEQPLLNPGDTYEYSSGCPLDTPSGVMFGHYSM---EAEGGETFNVAIPAFSLDSPG 124          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_OCHA4 (Protein apaG OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=apaG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.015e-24
Identity = 58/118 (49.15%), Postives = 74/118 (62.71%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSL 359
            T GI V V   Y+ED+S+P + +Y + YR+ I NNS   VQL  R+W ITDANG  E + G GV+GEQP + P  SF+YSS CPL+T SG M G ++M+     G   F V I  FSL
Sbjct:    6 TRGIEVSVEPFYLEDQSEPEENRYVWGYRITIANNSTETVQLRSRYWQITDANGYVEEVRGPGVVGEQPTLEPGDSFQYSSGCPLTTTSGVMVGRYQMQ---GNGGSLFEVDIPAFSL 120          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_BRUSU (Protein apaG OS=Brucella suis GN=apaG PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.326e-24
Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSL 359
            T GI V V   Y+E +S+P + +Y + YRV I NNS   VQL  R+W ITDANG  + + G GV+GEQPV+ P  S++YSS CPL+T SG M G ++MK  D  G+Q F + I  FSL
Sbjct:    6 TRGIEVTVEPFYLEVQSEPEENRYVWGYRVTIVNNSSETVQLCSRYWQITDANGHVQEVRGSGVVGEQPVLDPGASYQYSSGCPLTTSSGVMVGRYQMKGED--GAQ-FEIEIPAFSL 120          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_ANADE (Protein apaG OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=apaG PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.326e-24
Identity = 57/122 (46.72%), Postives = 74/122 (60.66%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            T GI V VR  +  +RS+P  G++ F+Y VR+ N  E P QL+ RHWII DANG+ E ++G GV+G+QP + P   FEY+S C L TP G M G + M   D    Q F+  IAPF L   G
Sbjct:    6 TEGIEVTVRSTFRPERSEP--GRFLFSYSVRVVNQGEAPAQLVSRHWIIVDANGEREEVVGDGVVGQQPHLEPGEHFEYTSFCVLKTPHGSMRGTYRMVRDD---GQAFDATIAPFPLVVPG 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_BRUSI (Protein apaG OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=apaG PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.732e-24
Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSL 359
            T GI V V   Y+E +S+P + +Y + YRV I NNS   VQL  R+W ITDANG  + + G GV+GEQPV+ P  S++YSS CPL+T SG M G ++MK  D  G+Q F + I  FSL
Sbjct:    6 TRGIEVTVEPFYLEVQSEPEENRYVWGYRVTIVNNSSETVQLCSRYWQITDANGHVQEVRGSGVVGEQPVLDPGDSYQYSSGCPLTTSSGVMVGRYQMKGED--GAQ-FEIEIPAFSL 120          
The following BLAST results are available for this feature:
BLAST of EY659595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
APAG_MARMM8.304e-2747.93Protein apaG OS=Maricaulis maris (strain MCS10) GN... [more]
APAG_MAGSA8.304e-2748.76Protein apaG OS=Magnetospirillum magneticum (strai... [more]
APAG_RHILO2.045e-2546.72Protein apaG OS=Rhizobium loti GN=apaG PE=3 SV=1[more]
APAG_RHISN2.671e-2547.54Protein apaG OS=Rhizobium sp. (strain NGR234) GN=a... [more]
APAG_AGRT54.557e-2546.72Protein apaG OS=Agrobacterium tumefaciens (strain ... [more]
APAG_SINMW5.951e-2546.72Protein apaG OS=Sinorhizobium medicae (strain WSM4... [more]
APAG_OCHA41.015e-2449.15Protein apaG OS=Ochrobactrum anthropi (strain ATCC... [more]
APAG_BRUSU1.326e-2450.00Protein apaG OS=Brucella suis GN=apaG PE=3 SV=1[more]
APAG_ANADE1.326e-2446.72Protein apaG OS=Anaeromyxobacter dehalogenans (str... [more]
APAG_BRUSI1.732e-2450.00Protein apaG OS=Brucella suis (strain ATCC 23445 /... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659595 ID=EY659595; Name=EY659595; organism=Citrus sinensis; type=EST; length=606bp
CAACAACCTTGGGGATAAGGGTTCAAGTTAGACGTGTGTACATTGAGGAC
CGTAGTCAACCTTTGAAGGGGCAGTACTTTTTCGCATATAGGGTAAGAAT
TACCAATAACTCAGAACGTCCTGTTCAACTTCTCAGACGGCATTGGATTA
TCACAGATGCAAACGGAAAAACTGAAAACATCTTAGGAGTTGGAGTCATT
GGTGAACAGCCAGTTATACTTCCTAATACCAGTTTTGAATACTCTTCAGC
ATGCCCTTTAAGCACTCCGAGTGGCAGAATGGAAGGTGATTTTGAGATGA
AACATGTTGATAGAGTAGGTTCACAAACTTTCAATGTGGCGATTGCACCT
TTTTCTCTATCCACAATGGGTGATGACAGTGATTCTTTTTAGAACTGGTA
TTAGGCGTCTCTGTGGAGGGTTGAGGCGCCATATCCCTGTCATGGTTGAT
TATTTTCAGAATTATAAATCAATGCATTGCAATATGTAAGTGTAATTATT
GGTCTATAAGCTCTTCATTTGTTTCTCTGCAAGGATCATATGTAGCAAAC
TTTCAAAAGAAATCAATTAATAATAAGTGTATTATAGCTAAAAAAAAAAA
AAAAAA
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