EY659570

Overview
NameEY659570
Unique NameEY659570
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9434 contig Csv1_Contig9434:695..1554. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659570 vs. ExPASy Swiss-Prot
Match: CLPT1_MOUSE (Cleft lip and palate transmembrane protein 1 homolog OS=Mus musculus GN=Clptm1 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.529e-42
Identity = 78/112 (69.64%), Postives = 89/112 (79.46%), Query Frame = 2 
Query:   32 FSLMYERHNSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 367
            +SL+Y  H  WYSW+LS L   +  FGF  M PQLFINYKLKSVAHLPWR +TYK LNT IDDLFAFVIKMP ++R+   RDD+VF IYLYQRWIY+VD TRVNEFG +GED
Sbjct:  493 YSLLYLEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGED 604
[Close]
BLAST of EY659570 vs. ExPASy Swiss-Prot
Match: CLPT1_HUMAN (Cleft lip and palate transmembrane protein 1 OS=Homo sapiens GN=CLPTM1 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.529e-42
Identity = 78/112 (69.64%), Postives = 89/112 (79.46%), Query Frame = 2 
Query:   32 FSLMYERHNSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 367
            +SL+Y  H  WYSW+LS L   +  FGF  M PQLFINYKLKSVAHLPWR +TYK LNT IDDLFAFVIKMP ++R+   RDD+VF IYLYQRWIY+VD TRVNEFG +GED
Sbjct:  493 YSLLYLEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGED 604
[Close]
BLAST of EY659570 vs. ExPASy Swiss-Prot
Match: CLPT1_BOVIN (Cleft lip and palate transmembrane protein 1 homolog OS=Bos taurus GN=CLPTM1 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.588e-42
Identity = 77/111 (69.37%), Postives = 88/111 (79.28%), Query Frame = 2 
Query:   32 FSLMYERHNSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGE 364
            +SL+Y  H  WYSW+LS L   +  FGF  M PQLFINYKLKSVAHLPWR +TYK LNT IDDLFAFVIKMP ++R+   RDD+VF IYLYQRWIY+VD TRVNEFG +GE
Sbjct:  493 YSLLYLEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGE 603
[Close]
BLAST of EY659570 vs. ExPASy Swiss-Prot
Match: CLPT1_DANRE (Cleft lip and palate transmembrane protein 1 homolog OS=Danio rerio GN=clptm1 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.096e-40
Identity = 75/112 (66.96%), Postives = 87/112 (77.68%), Query Frame = 2 
Query:   32 FSLMYERHNSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 367
            +SL+Y  H  WYSW+LS L   +  FGF  M PQLFINYK+KSVAHLPWR +TYK LNT IDDLFAFVIKMP ++R+   RDD+VF IYLYQRWIY+VD  RVNEFG +G D
Sbjct:  491 YSLLYVEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKMKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPMMYRIGCLRDDVVFFIYLYQRWIYRVDPNRVNEFGTSGVD 602
[Close]
BLAST of EY659570 vs. ExPASy Swiss-Prot
Match: CLP1L_BOVIN (Cleft lip and palate transmembrane protein 1-like protein OS=Bos taurus GN=CLPTM1L PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.441e-40
Identity = 72/112 (64.29%), Postives = 91/112 (81.25%), Query Frame = 2 
Query:   32 FSLMYERHNSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 367
            +SL+  ++ SWYSW+++S  + VY FGF  M PQLF+NYK+KSVAHLPW+  TYK  NT IDD+FAF+I MPT HRL+ FRDD+VFL+YLYQRW+Y VDK+RVNEFG + ED
Sbjct:  418 YSLLNIKYKSWYSWLINSFVNGVYAFGFLFMLPQLFVNYKMKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKSRVNEFGESYED 529
[Close]
BLAST of EY659570 vs. ExPASy Swiss-Prot
Match: CLP1L_PONAB (Cleft lip and palate transmembrane protein 1-like protein OS=Pongo abelii GN=CLPTM1L PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.164e-40
Identity = 75/122 (61.48%), Postives = 94/122 (77.05%), Query Frame = 2 
Query:   32 FSLMYERHNSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGEDDKVSDGTETD 397
            +SL+  ++ SWYSW+++S  + VY FGF  M PQLF+NYKLKSVAHLPW+  TYK  NT IDD+FAF+I MPT HRL+ FRDD+VFL+YLYQRW+Y VDK RVNEFG + E +K +    TD
Sbjct:  418 YSLLNIKYKSWYSWLINSFVNGVYAFGFLFMLPQLFVNYKLKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKRRVNEFGESYE-EKAARAPHTD 538
[Close]
BLAST of EY659570 vs. ExPASy Swiss-Prot
Match: CLP1L_HUMAN (Cleft lip and palate transmembrane protein 1-like protein OS=Homo sapiens GN=CLPTM1L PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.164e-40
Identity = 75/122 (61.48%), Postives = 94/122 (77.05%), Query Frame = 2 
Query:   32 FSLMYERHNSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGEDDKVSDGTETD 397
            +SL+  ++ SWYSW+++S  + VY FGF  M PQLF+NYKLKSVAHLPW+  TYK  NT IDD+FAF+I MPT HRL+ FRDD+VFL+YLYQRW+Y VDK RVNEFG + E +K +    TD
Sbjct:  418 YSLLNIKYKSWYSWLINSFVNGVYAFGFLFMLPQLFVNYKLKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKRRVNEFGESYE-EKATRAPHTD 538
[Close]
BLAST of EY659570 vs. ExPASy Swiss-Prot
Match: CLP1L_MOUSE (Cleft lip and palate transmembrane protein 1-like protein OS=Mus musculus GN=Clptm1l PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.102e-40
Identity = 71/112 (63.39%), Postives = 91/112 (81.25%), Query Frame = 2 
Query:   32 FSLMYERHNSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 367
            +SL+  ++ SWYSW+++S  + VY FGF  M PQLF+NYK+KSVAHLPW+  TYK  NT IDD+FAF+I MPT HRL+ FRDD+VFL+YLYQRW+Y VDK+RVNEFG + E+
Sbjct:  419 YSLLNIKYKSWYSWLINSFVNGVYAFGFLFMLPQLFVNYKMKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKSRVNEFGESYEE 530
[Close]
BLAST of EY659570 vs. ExPASy Swiss-Prot
Match: CLP1L_CHICK (Cleft lip and palate transmembrane protein 1-like protein OS=Gallus gallus GN=CLPTM1L PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.276e-40
Identity = 70/112 (62.50%), Postives = 91/112 (81.25%), Query Frame = 2 
Query:   32 FSLMYERHNSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 367
            +SL+  ++ SWYSW+++S  + VY FGF  M PQLF+NYK+KSVAHLPW+  TYK  NT IDD+FAF+I MPT HRL+ FRDD+VFL+YLYQRW+Y VDK+RVNE+G + E+
Sbjct:  418 YSLLNVKYKSWYSWLINSFVNGVYAFGFLFMLPQLFVNYKMKSVAHLPWKAFTYKAFNTFIDDIFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKSRVNEYGESYEE 529
[Close]
BLAST of EY659570 vs. ExPASy Swiss-Prot
Match: CLP1L_DANRE (Cleft lip and palate transmembrane protein 1-like protein OS=Danio rerio GN=clptm1l PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.582e-39
Identity = 69/112 (61.61%), Postives = 92/112 (82.14%), Query Frame = 2 
Query:   32 FSLMYERHNSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 367
            ++L++ ++ SWYSWI++SL + VY FGF  M PQLF+NYKLKSVAHLPW+   YK  NT IDD+FAF+I MPT HRL+ FRDD+VFL+YLYQRW+Y VD++RVNE+G + ++
Sbjct:  418 YALVFVKYKSWYSWIINSLVNGVYAFGFLFMLPQLFVNYKLKSVAHLPWKAFMYKAFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDRSRVNEYGVSYDE 529
The following BLAST results are available for this feature:
BLAST of EY659570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CLPT1_MOUSE1.529e-4269.64Cleft lip and palate transmembrane protein 1 homol... [more]
CLPT1_HUMAN1.529e-4269.64Cleft lip and palate transmembrane protein 1 OS=Ho... [more]
CLPT1_BOVIN7.588e-4269.37Cleft lip and palate transmembrane protein 1 homol... [more]
CLPT1_DANRE1.096e-4066.96Cleft lip and palate transmembrane protein 1 homol... [more]
CLP1L_BOVIN2.441e-4064.29Cleft lip and palate transmembrane protein 1-like ... [more]
CLP1L_PONAB4.164e-4061.48Cleft lip and palate transmembrane protein 1-like ... [more]
CLP1L_HUMAN4.164e-4061.48Cleft lip and palate transmembrane protein 1-like ... [more]
CLP1L_MOUSE7.102e-4063.39Cleft lip and palate transmembrane protein 1-like ... [more]
CLP1L_CHICK9.276e-4062.50Cleft lip and palate transmembrane protein 1-like ... [more]
CLP1L_DANRE1.582e-3961.61Cleft lip and palate transmembrane protein 1-like ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-F05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659570 ID=EY659570; Name=EY659570; organism=Citrus sinensis; type=EST; length=859bp
ATTACAGGCTCGACCCCGCGTCCGCCTCTTTTTCTCGCTCATGTATGAGC
GCCATAACAGTTGGTACTCTTGGATTCTTTCTTCTCTCACTAGCTGTGTT
TACATGTTTGGTTTCACTATGATGTGCCCGCAACTGTTTATTAACTATAA
GCTTAAGTCTGTGGCGCATCTACCCTGGAGGCAAATGACATACAAGTTCC
TGAACACCATAATTGATGATCTTTTTGCCTTTGTCATTAAAATGCCAACA
CTGCATCGGCTTTCCGTGTTTCGTGATGATCTTGTATTCTTGATATATCT
ATACCAGAGATGGATTTATAAAGTGGACAAGACACGTGTAAATGAATTTG
GTTTTGCTGGTGAGGATGATAAGGTTTCTGATGGTACAGAGACAGATGCA
CTTATCAGTAAGGAGGATAAGAAAACCAATTGAAAATAGAAAGGTGCAAC
TTCAAGGGAAGGATTTGATAAGAAAACTAACTGAGCAAGGTTTCAGTTAA
TTATATTTCAACAGATTTTGTGTAAAATTTGTTTAGGATAAAAATTATTC
TTTCCATATTTCGTTTTAGATAATCACATTATAATGTTGTTCCTGAGGGA
TTTGATTTTAGGTCTTTTCCTTGTGTTGCTATTAGAATTATTGTCTATCC
CTTTTTTGCCTTGTGGAAAGAAATGTATGAAATCGCAGCATAATAGAATG
TTGTTGGAGCACCTTCAAGGATTCTGTAACAGCTTGGTAGCATCAACAGA
TGCCGTGGCTGCTGATAGAATAGCTCAGCTGACAGCTTGGCATGTATACT
CTTTTTTCCCAATTTAATTTGAGCTATGGAATTGTTTTCAAAAAAAAAAA
AAAAAAAAA
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