EY659569

Overview
NameEY659569
Unique NameEY659569
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_ARATH (Eukaryotic translation initiation factor 3 subunit H OS=Arabidopsis thaliana GN=TIF3H1 PE=2 SV=2)

HSP 1 Score: 318.931 bits (816), Expect = 2.439e-86
Identity = 154/185 (83.24%), Postives = 170/185 (91.89%), Query Frame = 1
Query:   28 TMARSFLQVAAAEE-VAPPLIVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIP 579
            TMARSFLQ  + +E VAPPL VVQIEGL +LKIIKHCKEFSP LVTGQLLGLDVGSVLEVTNCFPFP++++DEEIEADGANYQLEMMRCLREVNVDNNTVGWYQST+LG +QT ELIETF+NYQENI+RCVCIIYDPS+++ G LA KALKLSDSFM+LYR  NFTGEKLREKN SW+DIFEEIP
Sbjct:    3 TMARSFLQAISKDEAVAPPLRVVQIEGLAVLKIIKHCKEFSPTLVTGQLLGLDVGSVLEVTNCFPFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKADLGVLALKALKLSDSFMELYRGGNFTGEKLREKNFSWMDIFEEIP 187          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_DICDI (Eukaryotic translation initiation factor 3 subunit H OS=Dictyostelium discoideum GN=eif3h PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.311e-49
Identity = 95/176 (53.98%), Postives = 131/176 (74.43%), Query Frame = 1
Query:   82 LIVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENI-RRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLL 606
            L VVQI+GLV+LKIIK CKE+ P LV GQLLGLD+G+ LEV+NCFPFP +++++E     A+YQLEMMR LREVN+D+NTVGWY  T L  F    +IET  NYQ  I ++CV I+YDP +++QG L+ K  +L+ SFM+L++  +F+ E+L + NLS+ DIFE+IP  ++   L+
Sbjct:   16 LDVVQIDGLVVLKIIKQCKEYLPELVPGQLLGLDIGTSLEVSNCFPFPPRDQEDENSESIADYQLEMMRFLREVNIDSNTVGWYTPTYLNSFFNESVIETQYNYQATINQKCVVIVYDPIKTSQGTLSLKCYRLTQSFMELFKDQSFSRERLDQANLSFNDIFEQIPIKIHNSQLI 191          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_EMENI (Eukaryotic translation initiation factor 3 subunit H OS=Emericella nidulans GN=AN1270 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.815e-39
Identity = 86/204 (42.16%), Postives = 121/204 (59.31%), Query Frame = 1
Query:   61 AEEVAPPLIVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGAN---------------YQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENI-RRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLLWTKFIN 624
            AE+   PL  V++E LV++KIIKHC +  P   TG ++G+DV  VLE+TN FPFP+ E   E   D A                YQ EM+R LREVNVD N VGWY S  +G F    +IE    YQ+ +  R V +++DPSRS QG+L+ +A +LS  FM  ++ N FT ++L++ NL + DI  E+P  ++   L+ T FI+
Sbjct:    2 AEKEVTPLTAVKVEALVVMKIIKHCSQVFPTTATGSIVGMDVDGVLEITNTFPFPVVEVPPESHFDNAAPNPAAAAPRAKANTVYQAEMIRMLREVNVDANNVGWYTSANMGNFVNMNVIENQFFYQKEMNERTVALVHDPSRSAQGSLSLRAFRLSPKFMAAFKDNKFTSDELQKSNLKYQDILVELPVEIHNSHLI-TSFIH 204          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_ASPCL (Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus clavatus GN=ACLA_025520 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.450e-38
Identity = 84/202 (41.58%), Postives = 120/202 (59.41%), Query Frame = 1
Query:   67 EVAPPLIVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEAD---------------GANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENI-RRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLLWTKFIN 624
            E   PL  V++E LV++KIIKHC +  P   TG ++G+DVG  LE+TN FPFP+ E   E   +                A YQ EM+R LREVNVD N VGWY S  +G F    ++E    YQ+ +  R V +++D SRS+QG+L+ +A +LS  FM  ++ N FT E+L++ NL + DIF E+P  ++   L+ T FI+
Sbjct:    3 EKETPLTAVKVEALVVMKIIKHCSQTFPTTATGSIVGMDVGGTLEITNSFPFPVLEVPSESHFENAPTNPAAAAPRAKGNAAYQAEMIRMLREVNVDANNVGWYTSANMGNFVNMNVVENQFFYQKEMNERTVALVHDVSRSSQGSLSLRAFRLSPKFMTAFKENKFTSEELQKSNLRYQDIFVELPVEIHNSHLI-TSFIH 203          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_NEMVE (Eukaryotic translation initiation factor 3 subunit H OS=Nematostella vectensis GN=v1g168210 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.893e-38
Identity = 79/166 (47.59%), Postives = 113/166 (68.07%), Query Frame = 1
Query:   88 VVQIEGLVMLKIIKHCKE--FSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIP 579
            +VQ++GL +LKIIKHC+E   S  LV G LLGL   + LE+TNCFPFP  +  ++ + D  NYQ+E+MR LR VN+D+  VGWYQST LG +    L+++  +YQ++I   V +IYDP R++QG L  KA +LSD  M LY+   F+ +KL +  +S+  +F+EIP
Sbjct:   17 IVQVDGLTVLKIIKHCEEEGSSGDLVQGVLLGLIQDNRLEITNCFPFPSNKAGDDEDDDDVNYQMEVMRRLRAVNIDHLHVGWYQSTYLGSYINRTLLDSQYSYQKSIEESVVLIYDPLRTSQGMLTLKAFRLSDEMMKLYKDGEFSADKLSKAGISFHSMFQEIP 182          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_ASPFU (Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus fumigatus GN=AFUA_1G09970 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.195e-38
Identity = 83/198 (41.92%), Postives = 118/198 (59.60%), Query Frame = 1
Query:   79 PLIVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGAN---------------YQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENI-RRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLLWTKFIN 624
            PL  V++E LV++KI+KHC +  P   TG ++G+DVG  LE+TN FPFP+ E   E   D A                YQ EM+R LREVNVD N VGWY S  +G F    +IE    YQ+ +  R V +++D SRS+QG+L+ +A +LS  FM  ++ N FT E+L++  L + DIF E+P  ++   L+ T FI+
Sbjct:    7 PLTAVKVEALVVMKIMKHCSQTFPTTATGSIVGMDVGGTLEITNSFPFPVVEVPPESHFDNAAANPAAAAPRAKANTVYQAEMIRMLREVNVDANNVGWYTSANMGNFVNMNVIENQFFYQKEMNERTVALVHDVSRSSQGSLSLRAFRLSPKFMTAFKENKFTSEELQKSGLRYQDIFVELPVEIHNSHLI-TSFIH 203          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_ASPFC (Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_009410 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.195e-38
Identity = 83/198 (41.92%), Postives = 118/198 (59.60%), Query Frame = 1
Query:   79 PLIVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGAN---------------YQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENI-RRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLLWTKFIN 624
            PL  V++E LV++KI+KHC +  P   TG ++G+DVG  LE+TN FPFP+ E   E   D A                YQ EM+R LREVNVD N VGWY S  +G F    +IE    YQ+ +  R V +++D SRS+QG+L+ +A +LS  FM  ++ N FT E+L++  L + DIF E+P  ++   L+ T FI+
Sbjct:    7 PLTAVKVEALVVMKIMKHCSQTFPTTATGSIVGMDVGGTLEITNSFPFPVVEVPPESHFDNAAANPAAAAPRAKANTVYQAEMIRMLREVNVDANNVGWYTSANMGNFVNMNVIENQFFYQKEMNERTVALVHDVSRSSQGSLSLRAFRLSPKFMTAFKENKFTSEELQKSGLRYQDIFVELPVEIHNSHLI-TSFIH 203          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_XENLA (Eukaryotic translation initiation factor 3 subunit H OS=Xenopus laevis GN=eif3h PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.091e-37
Identity = 77/174 (44.25%), Postives = 117/174 (67.24%), Query Frame = 1
Query:   91 VQIEGLVMLKIIKHCKE--FSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLL 606
            VQI+GLV+LKIIKH +E      +V G LLGL V   LE+TNCFPFP Q  +++++ D   YQ+EMMR LR VN+D+  VGWYQST  G F +  L+++  +YQ  I   V +IYDP +++QG+L+ KA +L+   M++ +  +F+ E L++ N+++ D+FEE+P  +    L+
Sbjct:   21 VQIDGLVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFP-QHTEDDVDFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTFYGTFVSRALLDSQFSYQHAIEESVVLIYDPIKTSQGSLSLKAYRLTPKLMEICKEKDFSAEGLKKANVAYEDMFEEVPIVIKNSHLI 193          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_XENTR (Eukaryotic translation initiation factor 3 subunit H OS=Xenopus tropicalis GN=eif3h PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.772e-36
Identity = 76/174 (43.68%), Postives = 116/174 (66.67%), Query Frame = 1
Query:   91 VQIEGLVMLKIIKHCKE--FSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLL 606
            VQI+G+V+LKIIKH +E      +V G LLGL V   LE+TNCFPFP Q  +++++ D   YQ+EMMR LR VN+D+  VGWYQST  G F +  L+++  +YQ  I   V +IYDP ++ QG+L+ KA +L+   M++ +  +F+ E L++ N+++ D+FEE+P  +    L+
Sbjct:   22 VQIDGMVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFP-QHTEDDVDFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTFYGTFVSRALLDSQFSYQHAIEESVVLIYDPIKTGQGSLSLKAYRLTPKLMEVCKEKDFSAEGLKKANIAFEDMFEEVPIIIKNSHLI 194          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_TAEGU (Eukaryotic translation initiation factor 3 subunit H OS=Taeniopygia guttata GN=EIF3H PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.948e-36
Identity = 77/174 (44.25%), Postives = 116/174 (66.67%), Query Frame = 1
Query:   91 VQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLL 606
            VQI+GLV+LKIIKH +E      +V G LLGL V   LE+TNCFPFP Q  +++ + D   YQ+EMMR LR VN+D+  VGWYQST  G F T  L+++  +YQ  I   V +IYDP ++ QG+L+ KA +L+   M++ +  +F+ E L++ N+++ ++FEE+P  +   +L+
Sbjct:   35 VQIDGLVVLKIIKHYQEEGQGNEVVQGVLLGLVVDDRLEITNCFPFP-QHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANIAYENMFEEVPIVIKNSYLI 207          
The following BLAST results are available for this feature:
BLAST of EY659569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
EIF3H_ARATH2.439e-8683.24Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_DICDI5.311e-4953.98Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_EMENI3.815e-3942.16Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_ASPCL1.450e-3841.58Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_NEMVE1.893e-3847.59Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_ASPFU7.195e-3841.92Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_ASPFC7.195e-3841.92Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_XENLA6.091e-3744.25Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_XENTR1.772e-3643.68Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_TAEGU3.948e-3644.25Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-F04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659569 ID=EY659569; Name=EY659569; organism=Citrus sinensis; type=EST; length=900bp
AGGAGTTTGTTCTTCCAAATGGCAAACACAATGGCTAGGTCTTTTCTACA
AGTTGCAGCTGCGGAGGAGGTTGCGCCGCCTCTCATAGTTGTTCAGATTG
AGGGTCTGGTTATGCTAAAAATAATCAAACACTGCAAGGAGTTTTCACCA
GCTTTGGTGACGGGACAACTTCTTGGGTTAGATGTTGGTAGCGTGCTTGA
AGTTACGAACTGTTTCCCCTTCCCGATCCAGGAAGAGGACGAAGAAATTG
AAGCTGATGGTGCTAATTACCAGCTTGAAATGATGAGGTGTCTAAGAGAG
GTTAATGTGGACAATAACACTGTTGGATGGTACCAATCAACAATGCTAGG
ATGTTTTCAAACAGCAGAGTTGATTGAAACTTTTCTGAACTACCAGGAGA
ATATTAGAAGGTGTGTCTGCATAATTTATGACCCTTCAAGGTCCAATCAA
GGTGCCTTAGCTTTTAAGGCTTTAAAGCTTTCTGATTCATTTATGGATCT
TTACCGCAGCAACAATTTTACTGGAGAAAAGTTGAGGGAGAAAAATTTAT
CATGGGTGGATATTTTTGAGGAAATTCCTGNTAGCTTATATGAACCATTT
CTTCTTTGGACAAAATTTATAAATTTATCGTTGTGCCTACATTGTTTGTT
ATTACAGTTTCCTTCTGTATCTGTGTAAAAGCAAAATGACTCTGCGGAGT
TGCTGTAACTATTTATTTGTTTCTTGGGGAGGTAAATCAGTTACATANTA
TCANGGCCCAAGATTTTATTCATGGATTTTNCTTGTGGNTNNGACTGAGT
GCATTGACCTGATAGCTGAAAAAGATATGATTTATAGCCCATAGNTCATG
TTTTTTCTTTTGTCAGACTGAGAGTATTATACTGTAAACCCGGACCNAAA
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