EY659567

Overview
NameEY659567
Unique NameEY659567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659567 vs. ExPASy Swiss-Prot
Match: AGD14_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana GN=AGD14 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.953e-17
Identity = 65/167 (38.92%), Postives = 81/167 (48.50%), Query Frame = 1
Query:    4 VHISGRMSEQMFEDRFANEGSCSMISDYSVSSGGDPFISGAQSPNFEKDAGFNSPPVQPSRDVSSLKANFKRDVDGIPHPKRTTSLGSMGSFDXXXXXXXXXXXXGLAD-VSEHDQAAGAPLDKISTFPQSHGPVNYGGLDLLEAP--VVTQTVPSTAPPIVLGQPP 495
            V+  GR S+ MFED+F+NE S    SDYSVSS GDPF S  QSPNF+++A F SP  Q S    S     +    G  H +RTTS GS+ S D            GL + VSE  Q  G+   K S             +DL + P   V Q+V +  P I    PP
Sbjct:  194 VYSPGRFSDHMFEDQFSNEDSAPRASDYSVSSAGDPFRSDIQSPNFQQEAEFRSPQFQHSNAPPS-----ENLFPGRQH-QRTTSSGSVRSVDSNFMSIKSYTSGGLGEAVSESRQNTGSQQGKTSNHVPLVAESTKAPIDLFQLPGAPVAQSVDTFQPSIAPRSPP 354          
The following BLAST results are available for this feature:
BLAST of EY659567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AGD14_ARATH4.953e-1738.92Probable ADP-ribosylation factor GTPase-activating... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659567 ID=EY659567; Name=EY659567; organism=Citrus sinensis; type=EST; length=860bp
CTTGTCCACATTTCTGGTCGCATGAGTGAACAAATGTTTGAGGACAGGTT
TGCAAATGAAGGCTCATGTTCTATGATTTCTGACTACTCTGTGTCTAGTG
GAGGTGATCCCTTCATATCTGGTGCACAGTCTCCCAACTTTGAGAAGGAT
GCTGGATTCAACAGCCCACCTGTTCAGCCTTCAAGGGATGTGTCATCTTT
GAAGGCAAACTTCAAGAGAGATGTAGATGGGATTCCACATCCAAAGAGAA
CCACATCCTTGGGAAGCATGGGATCATTTGATAGCAACTCCGTGTCTCTT
AAGTCATGTAATTCAAGTGGCTTAGCTGATGTCTCTGAGCATGACCAAGC
TGCTGGAGCTCCCCTGGACAAAATTTCTACTTTCCCACAATCTCATGGTC
CTGTGAATTATGGTGGCTTGGACCTTCTTGAGGCTCCAGTTGTAACACAA
ACAGTTCCCTCTACTGCACCCCCAATTGTTTTGGGTCAGCCTCCATAAGC
CTCTGCACCTCTTGTAAAATGGCTGAATTTTCCAAGCTTCTTCAGTTCAT
CTCCTATTTATATCAACCCGCCCAAACTACTTCCCCTCCATNCTGAACTT
TTTCCACACTCCGGACCCCCTCCCCCGGAACCCTGAATATAACCTCCCGG
AGGATTCTTTCCCTTGACGGATGGCTGCCCACTTTTGTACCCCTCTCTCG
GGTTCTCCATCCATAACACAGGAGCTTTCCCTCCCTCGGCCCACGTACGT
ATTCTTCCCGCAAATTGTCACATTCCCTCCCTCACAGAGNCGGAATGGCT
CCTCTTAAATATGGGAGATTTGGAGCTTTCCTCATTTCGGTTGCCCGGTT
GNGCCCCTTC
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