EY659562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659562 vs. ExPASy Swiss-Prot
Match: LBD37_ARATH (LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.197e-56 Identity = 121/221 (54.75%), Postives = 134/221 (60.63%), Query Frame = 2 Query: 113 HATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCGGSPTLTSDDVSEAEVTCTDMSRLQDXXXXXXXXXXXXXXXXXXXXXXXXXEE-------SAMKLQQSDLDLRLTPRFTGK--VPPEVRRRPGTPSMNSEESGTTT-----CFESGLTDHRYLNGAXE-RKLLNLFV 730 HATVFVAKFFGRAGLMSFISAVP+SQRPALFQSLLYEACGRTVNPVNGA+G+LWTGNW++CQAAVETVLRGG+LRP+PELL GG S EA CT+M LQ S+ S+LDL L P F K P RRR TPSMNSE+SGTTT C + + Y NG E KLLNLFV Sbjct: 34 HATVFVAKFFGRAGLMSFISAVPDSQRPALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGFAGFPSPTSEEASEICTEMLNLQQNDSTDRNIYHHSRFSSSRSRSTMDSSSPTKRKRLSSEDQPSSELDLSLIPNFPIKQATPSSTRRRSVTPSMNSEDSGTTTTTTAFCDKGDV----YGNGGGETTKLLNLFV 250 HSP 2 Score: 39.2762 bits (90), Expect = 1.197e-56 Identity = 16/26 (61.54%), Postives = 21/26 (80.77%), Query Frame = 3 Query: 33 RVRRILCSESCILPPCLQWIESPESQ 110 RV R CSE+CIL PC+QWIE+ ++Q Sbjct: 7 RVLRKGCSENCILRPCIQWIETADAQ 32
BLAST of EY659562 vs. ExPASy Swiss-Prot
Match: LBD38_ARATH (LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 2.215e-55 Identity = 118/219 (53.88%), Postives = 134/219 (61.19%), Query Frame = 2 Query: 113 HATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCG--GSPTLTSDDVSEAEVTCTDMSRLQDXXXXXXXXXXXXXXXXXXXXXXXXXEE-------SAMKLQQSDLDLRLTPRFTGKVPPEVRRRPGTPSMNSEESGTTTCFESGLTDHRYL-----NGAXERKLLNLF 727 HATVFVAKFFGRAGLMSFISAVPESQ PALFQSLLYEACGRTVNPVNGAVGLLWTGNW+VCQAAVETVLRGG+L+P+PELLN G G P+ TSD+ SE CT+M L+ S+ + S+LDL L P + K P + TPSM SEES TT F++ RY+ G KLLNLF Sbjct: 34 HATVFVAKFFGRAGLMSFISAVPESQCPALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFAGFPSPTSDEASE---ICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSRSTASPPKRKRLSSEQQPSSELDLSLIPIYPIKTLP---FKEDTPSMYSEESVTTVSFQNNNAGDRYVRCGGGGGGATTKLLNLF 246 HSP 2 Score: 44.669 bits (104), Expect = 2.215e-55 Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 3 Query: 33 RVRRILCSESCILPPCLQWIESPESQ 110 RV R CSE+CIL PC+QWIESPE+Q Sbjct: 7 RVLRKGCSENCILRPCIQWIESPEAQ 32
BLAST of EY659562 vs. ExPASy Swiss-Prot
Match: LBD39_ARATH (LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 8.934e-51 Identity = 110/214 (51.40%), Postives = 131/214 (61.21%), Query Frame = 2 Query: 113 HATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCGGSPTLTSDDVSEAEVTCTDMSRLQDXXXXXXXXXXXXXXXXXXXXXXXXXEESAMKLQQSD-LDLRLTPRFTGKVPPEV------RRRPGTPSMNSEESGTTTCFESGLT-DHRYLNGAXERKLLNLFV 730 HATVFVAKFFGRAGLMSFIS+VPE QRPALFQSLL+EACGRTVNPVNGAVG+LWT NWHVCQAAVETVLRGGTLRP+ +LL S P+L +E+ D+SR Q +S + LQ + L L +PP RPG+PS EES TT+C+E+G+ D++ E+KLLNLFV Sbjct: 34 HATVFVAKFFGRAGLMSFISSVPELQRPALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLES----PSLMISCDESSEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTLTAPAVPVPFLPPSSFCKVVKGDRPGSPS---EESVTTSCWENGMRGDNKQKRNKGEKKLLNLFV 240 HSP 2 Score: 43.5134 bits (101), Expect = 8.934e-51 Identity = 20/26 (76.92%), Postives = 21/26 (80.77%), Query Frame = 3 Query: 33 RVRRILCSESCILPPCLQWIESPESQ 110 RV R CSE+CIL PCLQWIES ESQ Sbjct: 7 RVLRKGCSETCILRPCLQWIESAESQ 32
BLAST of EY659562 vs. ExPASy Swiss-Prot
Match: LBD40_ARATH (LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.818e-31 Identity = 50/78 (64.10%), Postives = 67/78 (85.90%), Query Frame = 2 Query: 110 SHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPV 343 ++ATVF+AKF+GRAGLM+ ++ P+ RPA+F+SLLYEACGR VNP+ G+VGLLW+GNWH+CQAAVE V+RG + P+ Sbjct: 35 ANATVFLAKFYGRAGLMNLLNTGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112 HSP 2 Score: 40.4318 bits (93), Expect = 1.818e-31 Identity = 18/27 (66.67%), Postives = 21/27 (77.78%), Query Frame = 3 Query: 33 RVRRILCSESCILPPCLQWIESPESQA 113 RV R CSE+C + PCLQWI+S ESQA Sbjct: 9 RVLRKGCSENCSIRPCLQWIKSAESQA 35
BLAST of EY659562 vs. ExPASy Swiss-Prot
Match: LBD41_ARATH (LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 7.858e-29 Identity = 50/96 (52.08%), Postives = 70/96 (72.92%), Query Frame = 2 Query: 110 SHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCGGSPTLTSDDV 397 ++ATVF+AKF+GRAGLM+ I+A P RP +F+SLL+EACGR VNP+ G+VGLLW+GNW +CQ AVE V++G ++ + + G P L D+ Sbjct: 35 ANATVFLAKFYGRAGLMNLINAGPNHLRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIGQGPPLKIYDI 130 HSP 2 Score: 39.6614 bits (91), Expect = 7.858e-29 Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 33 RVRRILCSESCILPPCLQWIESPESQA 113 RV R CSE C + PCL WI+SPE+QA Sbjct: 9 RVLRKGCSEDCSIRPCLAWIKSPEAQA 35
BLAST of EY659562 vs. ExPASy Swiss-Prot
Match: LBD42_ARATH (LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.122e-27 Identity = 47/79 (59.49%), Postives = 64/79 (81.01%), Query Frame = 2 Query: 110 SHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVP 346 ++AT+F+AKF+GRAGL++ I + P+ RPA+F+SLLYEACGR VNPV+G+VGL+W+GNW CQAAV+ VL G + P Sbjct: 35 ANATLFLAKFYGRAGLLNLIESGPDHLRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTP 113 HSP 2 Score: 36.965 bits (84), Expect = 4.122e-27 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 33 RVRRILCSESCILPPCLQWIESPESQA 113 RV R C++ C + PCLQWI+S +SQA Sbjct: 9 RVLRKGCNQDCTIRPCLQWIKSADSQA 35 The following BLAST results are available for this feature:
BLAST of EY659562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659562 ID=EY659562; Name=EY659562; organism=Citrus sinensis; type=EST; length=955bpback to top |