EY659539

Overview
NameEY659539
Unique NameEY659539
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: KASC1_HORVU (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 2.338e-71
Identity = 135/178 (75.84%), Postives = 147/178 (82.58%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            E  G+LVMES EHAMKR A IIAEYLGGAV CDA+HMTDPR+DGLGVSSCI  SL DAGV+PEEVNY+NAHATSTLAGDLAEV AIK+VFK+ SE+K+N TKSMI          EAI TIK+ITTGW+HPT+NQ N EPEV  DTV N KKQH VNV ISNSFGFGGHNSVVVFAPF
Sbjct:  283 EGAGVLVMESLEHAMKRDAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCITMSLRDAGVAPEEVNYINAHATSTLAGDLAEVRAIKQVFKNPSEIKINSTKSMIGHCLGAAGGLEAIATIKSITTGWVHPTINQFNPEPEVDFDTVANEKKQHEVNVGISNSFGFGGHNSVVVFAPF 460          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: KASC1_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=2 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 5.209e-71
Identity = 133/178 (74.72%), Postives = 145/178 (81.46%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            E  G+LVMES EHAMKRGA I+AEYLGGAV CDAHHMTDPR+DGLGVSSCI   LEDAGVSPEEVNY+NAHATSTLAGDLAE+NAIKKVFK TS +K+N TKSMI          EAI T+KAI TGWLHP++NQ N E  V  DTVPN KKQH V+VAISNSFGFGGHNSVV F+ F
Sbjct:  294 EGAGVLVMESLEHAMKRGAPIVAEYLGGAVNCDAHHMTDPRADGLGVSSCIERCLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKSTSGIKINATKSMIGHCLGAAGGLEAIATVKAINTGWLHPSINQFNPEQAVDFDTVPNEKKQHEVDVAISNSFGFGGHNSVVAFSAF 471          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_SYNY3 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabF PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.750e-34
Identity = 77/179 (43.02%), Postives = 110/179 (61.45%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            E  GIL++E  E A+ RGA I  E +G A+TCDA+H+T P  DG G +  IA +L+D+G+ PE V+Y+NAH TST A D+ E  AIK+   + +  + ++ TKSM           EA+ T+ AI    + PT+N +N +PE  +D VP   +   V+VA+SNSFGFGGHN  + F  +
Sbjct:  237 EGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKKY 415          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_STAAW (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.935e-33
Identity = 78/179 (43.58%), Postives = 109/179 (60.89%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE-MKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            E  GILV+ES E A  RGANI AE +G   T DA+H+T P  +G G S  +  +++DAG+ P++V Y+NAH TST  GDL EV AIK  F + ++ +K++ TKSM           EAI +  +I    + PT++    +PE  +D VPN  +   +  A+SNS GFGGHN+V+VF  F
Sbjct:  234 EGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 412          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_STAAS (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MSSA476) GN=fabF PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.935e-33
Identity = 78/179 (43.58%), Postives = 109/179 (60.89%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE-MKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            E  GILV+ES E A  RGANI AE +G   T DA+H+T P  +G G S  +  +++DAG+ P++V Y+NAH TST  GDL EV AIK  F + ++ +K++ TKSM           EAI +  +I    + PT++    +PE  +D VPN  +   +  A+SNS GFGGHN+V+VF  F
Sbjct:  234 EGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 412          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_STAAR (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MRSA252) GN=fabF PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.935e-33
Identity = 78/179 (43.58%), Postives = 109/179 (60.89%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE-MKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            E  GILV+ES E A  RGANI AE +G   T DA+H+T P  +G G S  +  +++DAG+ P++V Y+NAH TST  GDL EV AIK  F + ++ +K++ TKSM           EAI +  +I    + PT++    +PE  +D VPN  +   +  A+SNS GFGGHN+V+VF  F
Sbjct:  234 EGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 412          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_STAAN (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain N315) GN=fabF PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.935e-33
Identity = 78/179 (43.58%), Postives = 109/179 (60.89%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE-MKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            E  GILV+ES E A  RGANI AE +G   T DA+H+T P  +G G S  +  +++DAG+ P++V Y+NAH TST  GDL EV AIK  F + ++ +K++ TKSM           EAI +  +I    + PT++    +PE  +D VPN  +   +  A+SNS GFGGHN+V+VF  F
Sbjct:  234 EGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 412          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_STAAM (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabF PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.935e-33
Identity = 78/179 (43.58%), Postives = 109/179 (60.89%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE-MKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            E  GILV+ES E A  RGANI AE +G   T DA+H+T P  +G G S  +  +++DAG+ P++V Y+NAH TST  GDL EV AIK  F + ++ +K++ TKSM           EAI +  +I    + PT++    +PE  +D VPN  +   +  A+SNS GFGGHN+V+VF  F
Sbjct:  234 EGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 412          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_STAAC (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain COL) GN=fabF PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.935e-33
Identity = 78/179 (43.58%), Postives = 109/179 (60.89%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE-MKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            E  GILV+ES E A  RGANI AE +G   T DA+H+T P  +G G S  +  +++DAG+ P++V Y+NAH TST  GDL EV AIK  F + ++ +K++ TKSM           EAI +  +I    + PT++    +PE  +D VPN  +   +  A+SNS GFGGHN+V+VF  F
Sbjct:  234 EGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 412          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_STAAU (3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment) OS=Staphylococcus aureus GN=fabF PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.311e-33
Identity = 77/176 (43.75%), Postives = 108/176 (61.36%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE-MKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 527
            E  GILV+ES E A  RGANI AE +G   T DA+H+T P  +G G S  +  +++DAG+ P++V Y+NAH TST  GDL EV AIK  F + ++ +K++ TKSM           EAI +  +I    + PT++    +PE  +D VPN  +   +  A+SNS GFGGHN+V+VF
Sbjct:  227 EGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKIAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVF 402          
The following BLAST results are available for this feature:
BLAST of EY659539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
KASC1_HORVU2.338e-7175.843-oxoacyl-[acyl-carrier-protein] synthase I, chlor... [more]
KASC1_ARATH5.209e-7174.723-oxoacyl-[acyl-carrier-protein] synthase I, chlor... [more]
FABF_SYNY31.750e-3443.023-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Syn... [more]
FABF_STAAW1.935e-3343.583-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAS1.935e-3343.583-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAR1.935e-3343.583-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAN1.935e-3343.583-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAM1.935e-3343.583-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAC1.935e-3343.583-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAU4.311e-3343.753-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragm... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659539 ID=EY659539; Name=EY659539; organism=Citrus sinensis; type=EST; length=939bp
GAGAGGTTTGTGGCATACTGGTTATGGAGAGCTCGGAGCATGCAATGAAA
AGAGGAGCTAACATAATTGCCGAGTATCTGGGAGGTGCGGTAACCTGTGA
TGCTCATCACATGACAGATCCAAGGTCAGATGGCCTCGGAGTTTCATCTT
GCATAGCCAATAGTTTAGAAGATGCAGGAGTTTCCCCTGAAGAGGTTAAC
TACGTGAATGCTCATGCAACATCCACATTAGCAGGGGATTTGGCTGAGGT
TAATGCAATTAAGAAGGTCTTCAAGGACACATCTGAAATGAAGATGAATG
GAACTAAGTCGATGATTGGACATGGGCTTGGGGCAGCTGGCGGATTGGAA
GCTATAACAACCATAAAAGCAATCACCACTGGCTGGTTGCATCCAACCCT
TAACCAAGATAACTTGGAGCCTGAGGTTACAATCGACACCGTTCCAAATG
TGAAGAAACAGCATCACGTTAACGTTGCTATCTCAAATTCATTTGGCTTT
GGTGGTCACAACTCTGTGGTGGTTTTTGCTCCCTTCTCACATAAATAAAC
TGTGGGCCAAAGAATTTCTCTATTTCAACCATTCCTTTAACAGAAAATTA
ATCATTGATTTGAGGCCTTAATTAACATTGCTTNAAAGCATGGGACGTAT
AAAGTGATGAAGAAATCATTAATGCTCTGACGAGTGATGAAGTCACAGTA
GCTTCTTTTGGCAATTCATTNCATCCATCACCATGCTCGAGTGAGGGCAC
ATTCTCTGGTGTTTCGATTTGAATAAATAACACTCATGTAACTNNCCCTA
TGTGGTCCTGGTTCGCCTGGATTCTAATTTCCACCCTAAAATAAATATTG
GGGCTTATTTTTGATGGGTAGATAACAAGGTTAAAGATGCCGCCTCAATA
AATCCAACCTGGTCCTGACCTAAAAAAAAAAAAAAAAAA
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