EY659534

Overview
NameEY659534
Unique NameEY659534
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig524 contig Csv1_Contig524:132..1004. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659534 vs. ExPASy Swiss-Prot
Match: VATC_ARATH (V-type proton ATPase subunit C OS=Arabidopsis thaliana GN=VHA-C PE=1 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 8.933e-115
Identity = 215/282 (76.24%), Postives = 239/282 (84.75%), Query Frame = 2
Query:   14 MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQS*SLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRPSKLLYDDNEYALYTVTLFGRVADNFRIPAREKGFQILIL---I*F*STR*SYQELEKICYDQESLRTFLLK 850
            M SRYWVVSLPV++SA+S+WNRLQEQISKHSFDTP+YRFNIPNLRVGT           +KSNSFVE VS KIRRQIEELER+SG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E+VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQS SLAVRDLSNLVKPEDI+ SEHLVTLLAVVPKYSQKDWLA YETLT YVVPR SK L++DNEYALYTVTLF RVADNFRI AREKGFQ+      +    TR   QEL K+  DQESLR+ LL+
Sbjct:    1 MTSRYWVVSLPVKDSASSLWNRLQEQISKHSFDTPVYRFNIPNLRVGTLDSLLALGDDLLKSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKEVVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEHLVTLLAVVPKYSQKDWLACYETLTDYVVPRSSKKLFEDNEYALYTVTLFTRVADNFRIAAREKGFQVRDFEQSVEAQETR--KQELAKLVQDQESLRSSLLQ 280          
BLAST of EY659534 vs. ExPASy Swiss-Prot
Match: VATC_HORVU (V-type proton ATPase subunit C OS=Hordeum vulgare GN=VATC PE=1 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 7.597e-98
Identity = 185/281 (65.84%), Postives = 220/281 (78.29%), Query Frame = 2
Query:   14 MASRYWVVSLPV--QNSAA---SVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQS*SLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRPSKLLYDDNEYALYTVTLFGRVADNFRIPAREKGFQILILI*F*STR*S-YQELEKICYDQESLRT 838
            MA+RYW+ +LPV   N AA   ++W RLQE IS+HSFDTPLYRF +P+LR GT           VKSN F+E VSHKIRRQIE+LER  G+E  +L+VDGVPVD+YLTRFVWDE KYP  +PL+E V  I + VAKIEDD+KVRVAEY NV+SQL AINRKQ+ SLAVRDLSNL+KPED++TSEHLVTLL++VPKYSQKDWLASYE+L ++VVPR SK LY+DNEYALYTVTLF +V DNF++ AREKGFQI         + S  QELEK+  DQE +RT
Sbjct:    1 MATRYWIAALPVADDNVAAGKTALWARLQEAISRHSFDTPLYRFTVPDLRPGTLDSLLALSDDLVKSNIFIEGVSHKIRRQIEDLERAGGVEPGTLTVDGVPVDSYLTRFVWDEGKYPVNAPLKETVASIQSQVAKIEDDMKVRVAEYGNVKSQLGAINRKQTGSLAVRDLSNLIKPEDMVTSEHLVTLLSIVPKYSQKDWLASYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDNFKVHAREKGFQIRDFEYSPEAQESRKQELEKLLQDQEVMRT 281          
BLAST of EY659534 vs. ExPASy Swiss-Prot
Match: VTC1A_DANRE (V-type proton ATPase subunit C 1-A OS=Danio rerio GN=atp6v1c1a PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.250e-44
Identity = 94/247 (38.06%), Postives = 149/247 (60.32%), Query Frame = 2
Query:   20 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQS*SLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRPSKLLYDDNEYALYTVTLFGRVADNFRIPAREKGFQI 754
            + +W++S P + +    W++L    ++ +  +   +FNIP+L+VGT            K ++FVESV  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + I   V++I++DLK R + YNN++  L  + RK + SL  R L+++VK +D ++ SE+L+TLL VVPK +  DW  +YETL   VVPR + LL++D++  L+TVTLF +  D+FR  ARE  F +
Sbjct:    2 TEFWLISAPGEKTCQQTWDKLMTATTRTNNLSTNNKFNIPDLKVGTLDVLVGLSDELAKLDAFVESVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYVTRFQWDMAKYPIKQSLKNISEIISKQVSQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKDDFVLDSEYLITLLVVVPKTNYTDWQRTYETLAEMVVPRSTNLLFEDHDSGLFTVTLFRKAIDDFRHKARENKFTV 248          
BLAST of EY659534 vs. ExPASy Swiss-Prot
Match: VATC1_PONAB (V-type proton ATPase subunit C 1 OS=Pongo abelii GN=ATP6V1C1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.654e-42
Identity = 95/245 (38.78%), Postives = 140/245 (57.14%), Query Frame = 2
Query:   20 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQS*SLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRPSKLLYDDNEYALYTVTLFGRVADNFRIPAREKGF 748
            + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK + SL  R L+ +VK +D ++ SE+LVTLL VVPK +  DW+  YETL   VVPR S +L +D +  L  VTLF +  D+FR  ARE  F
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKF 246          
BLAST of EY659534 vs. ExPASy Swiss-Prot
Match: VATC1_MACFA (V-type proton ATPase subunit C 1 OS=Macaca fascicularis GN=ATP6V1C1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.654e-42
Identity = 95/245 (38.78%), Postives = 140/245 (57.14%), Query Frame = 2
Query:   20 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQS*SLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRPSKLLYDDNEYALYTVTLFGRVADNFRIPAREKGF 748
            + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK + SL  R L+ +VK +D ++ SE+LVTLL VVPK +  DW+  YETL   VVPR S +L +D +  L  VTLF +  D+FR  ARE  F
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKF 246          
BLAST of EY659534 vs. ExPASy Swiss-Prot
Match: VATC1_HUMAN (V-type proton ATPase subunit C 1 OS=Homo sapiens GN=ATP6V1C1 PE=1 SV=4)

HSP 1 Score: 172.555 bits (436), Expect = 2.654e-42
Identity = 95/245 (38.78%), Postives = 140/245 (57.14%), Query Frame = 2
Query:   20 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQS*SLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRPSKLLYDDNEYALYTVTLFGRVADNFRIPAREKGF 748
            + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK + SL  R L+ +VK +D ++ SE+LVTLL VVPK +  DW+  YETL   VVPR S +L +D +  L  VTLF +  D+FR  ARE  F
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKF 246          
BLAST of EY659534 vs. ExPASy Swiss-Prot
Match: VATC_MANSE (V-type proton ATPase subunit C OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.466e-42
Identity = 95/247 (38.46%), Postives = 143/247 (57.89%), Query Frame = 2
Query:   20 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQS*SLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRPSKLLYDDNEYALYTVTLFGRVADNFRIPAREKGFQI 754
            S YW++S P   +    W  L +    ++     Y+F IP+L+VGT            K ++FVE V+ K+ + + E LE        +L+ +   +  YLTRF WD AKYP    LR I D I   V +I+ DLKV+ + YN ++  L  + +KQ+ SL  R+L++LVK E  I+ SE+L TLL +VPK    DW A+YE +T  +VPR ++L++ D +Y L+TVTLF +V D F++ ARE+ F +
Sbjct:    2 SEYWLISAPGDKTCQQTWEALNQATKANNLSLN-YKFPIPDLKVGTLDQLVGLSDDLGKLDTFVEGVTRKVAQYLGEVLEDQRDKLHENLTANNDDLPHYLTRFQWDMAKYPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALKGNLQNLEKKQTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKSMFNDWNANYEKITDMIVPRSTQLIHQDGDYGLFTVTLFKKVVDEFKLHARERKFVV 247          
BLAST of EY659534 vs. ExPASy Swiss-Prot
Match: VATC1_BOVIN (V-type proton ATPase subunit C 1 OS=Bos taurus GN=ATP6V1C1 PE=1 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 7.722e-42
Identity = 94/245 (38.37%), Postives = 140/245 (57.14%), Query Frame = 2
Query:   20 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQS*SLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRPSKLLYDDNEYALYTVTLFGRVADNFRIPAREKGF 748
            + +W++S P + +    W +L    +K++      +FNIP+L+VGT            K ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK + SL  R L+ +VK +D ++ SE+LVTLL VVPK +  DW+  YETL   VVPR S +L +D +  L  VTLF +  D+FR  ARE  F
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKF 246          
BLAST of EY659534 vs. ExPASy Swiss-Prot
Match: VATC1_RAT (V-type proton ATPase subunit C 1 OS=Rattus norvegicus GN=Atp6v1c1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.008e-41
Identity = 94/245 (38.37%), Postives = 139/245 (56.73%), Query Frame = 2
Query:   20 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQS*SLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRPSKLLYDDNEYALYTVTLFGRVADNFRIPAREKGF 748
            + +W++S P + +    W +L    +K++      +FNIP+L+VGT            K ++FVE V  K+ + + + LE        +L   GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK + SL  R L+ +VK +D ++ SE+LVTLL VVPK +  DW+  YETL   VVPR S +L +D +  L  VTLF +  D+FR  ARE  F
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFKKAVDDFRHKARENKF 246          
BLAST of EY659534 vs. ExPASy Swiss-Prot
Match: VATC1_MOUSE (V-type proton ATPase subunit C 1 OS=Mus musculus GN=Atp6v1c1 PE=1 SV=4)

HSP 1 Score: 170.629 bits (431), Expect = 1.008e-41
Identity = 94/245 (38.37%), Postives = 139/245 (56.73%), Query Frame = 2
Query:   20 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQS*SLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRPSKLLYDDNEYALYTVTLFGRVADNFRIPAREKGF 748
            + +W++S P + +    W +L    +K++      +FNIP+L+VGT            K ++FVE V  K+ + + + LE        +L   GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK + SL  R L+ +VK +D ++ SE+LVTLL VVPK +  DW+  YETL   VVPR S +L +D +  L  VTLF +  D+FR  ARE  F
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKARENKF 246          
The following BLAST results are available for this feature:
BLAST of EY659534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
VATC_ARATH8.933e-11576.24V-type proton ATPase subunit C OS=Arabidopsis thal... [more]
VATC_HORVU7.597e-9865.84V-type proton ATPase subunit C OS=Hordeum vulgare ... [more]
VTC1A_DANRE8.250e-4438.06V-type proton ATPase subunit C 1-A OS=Danio rerio ... [more]
VATC1_PONAB2.654e-4238.78V-type proton ATPase subunit C 1 OS=Pongo abelii G... [more]
VATC1_MACFA2.654e-4238.78V-type proton ATPase subunit C 1 OS=Macaca fascicu... [more]
VATC1_HUMAN2.654e-4238.78V-type proton ATPase subunit C 1 OS=Homo sapiens G... [more]
VATC_MANSE3.466e-4238.46V-type proton ATPase subunit C OS=Manduca sexta PE... [more]
VATC1_BOVIN7.722e-4238.37V-type proton ATPase subunit C 1 OS=Bos taurus GN=... [more]
VATC1_RAT1.008e-4138.37V-type proton ATPase subunit C 1 OS=Rattus norvegi... [more]
VATC1_MOUSE1.008e-4138.37V-type proton ATPase subunit C 1 OS=Mus musculus G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-B12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659534 ID=EY659534; Name=EY659534; organism=Citrus sinensis; type=EST; length=870bp
AAGTGATCGTGAAATGGCATCAAGGTACTGGGTGGTGTCTCTTCCAGTAC
AAAATTCAGCCGCTTCTGTTTGGAATCGATTACAGGAACAAATCTCTAAA
CATTCATTTGACACTCCTCTTTACAGGTTTAATATCCCCAACCTCCGTGT
TGGAACCCTAGATTCACTCCTTGCACTTAGCGATGATCTCGTGAAGTCAA
ATAGCTTTGTTGAATCAGTATCTCACAAGATCAGGCGACAGATTGAGGAA
CTGGAGAGGGTATCAGGCATAGAGAGTAGTTCTTTGAGTGTTGATGGAGT
ACCAGTTGATACTTATCTCACTAGGTTTGTTTGGGATGAAGCAAAGTACC
CAACTATGTCACCTTTAAGGGAAATTGTGGATGGCATTCATACTCTTGTG
GCAAAGATTGAAGACGATCTTAAGGTTCGTGTTGCTGAGTATAATAATGT
CCGCAGTCAGCTGAATGCTATTAATCGAAAGCAAAGTTGAAGCTTAGCTG
TTCGTGATCTTTCCAATCTGGTAAAACCAGAGGATATCATTACCTCAGAA
CATCTTGTAACCCTTCTTGCTGTTGTCCCCAAGTACTCCCAGAAGGATTG
GTTGGCTAGCTATGAGACGTTGACTAGCTATGTGGTCCCCAGGCCCTCCA
AGCTATTGTATGACGATAATGAATATGCCCTCTACACTGTCACACTATTT
GGACGTGTTGCAGACAATTTCAGAATACCTGCCCGTGAGAAGGGCTTCCA
AATCCTGATTTTAATATAGTTCTGAAGCACAAGATAGTCGTATCAGGAGT
TGGAAAAAATATGTTACGACCAAGAAAGCTTGAGAACCTTTCTTTTGAAG
GGCGCTATACCACGTACGGG
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