EY659479

Overview
NameEY659479
Unique NameEY659479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length958
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659479 vs. ExPASy Swiss-Prot
Match: KEG_ARATH (E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.181e-17
Identity = 70/240 (29.17%), Postives = 113/240 (47.08%), Query Frame = 1 
Query:   94 QSVCWLHGISVINGKICIAMKFYEGSVGDRIAHHI*CKLPLPDILRYGIQLAKGISDLHSIGXXXXXXXXXXXXXIEHDQLVLGDFGIPYLLLGRS-------LSDSDMALRLG----TPNYMAPEQWEP------EVRGPISFETDTWGFGCSIMEMLTGIQPWFGKSVEEIYHSVVIKIDKPRIPSGLPPAVENVL-FGASSMISETVL*WQI--SCMLFESSQNAVFNDGXMAWFMK 753
            ++VC  HG+  ++G +C+ M    GSV   +  +   +L L  ILRYG  +A+G+++LH+ G                   V+ D+G+  +L   +          S + L       +P+Y APE W P      E    +S E+D W FGC+++EM TG  PW G S EEI+ +VV    K R    +PP  E ++  G    +      W++   C+ F+ S+   FN   +A F++
Sbjct:  204 RNVCTFHGVVKMDGSLCLLMDRCFGSVQSEMQRNE-GRLTLEQILRYGADVARGVAELHAAGVICMNIKPSNLLLDASGNAVVSDYGLAPILKKPTCQKTRPEFDSSKVTLYTDCVTLSPHYTAPEAWGPVKKLFWEDASGVSPESDAWSFGCTLVEMCTGSTPWDGLSREEIFQAVV----KAR---KVPPQYERIVGVGIPREL------WKMIGECLQFKPSKRPTFN-AMLATFLR 428
The following BLAST results are available for this feature:
BLAST of EY659479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
KEG_ARATH1.181e-1729.17E3 ubiquitin-protein ligase KEG OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659479 ID=EY659479; Name=EY659479; organism=Citrus sinensis; type=EST; length=958bp
TGCCGGNATTACATGCCCGACCCACGCGTCCGGGACTGTGTTAAAGTGTT
TGTCATTAAGTTTGAAGCATTGTTTCCAAAGTTCATAGAAAGCCAAAGTG
TTTGTTGGTTGCATGGTATTTCAGTCATTAATGGAAAGATTTGTATTGCC
ATGAAATTTTACGAGGGATCGGTGGGCGATCGAATAGCTCATCATATATG
ATGCAAGCTTCCTTTGCCTGATATCTTGAGGTATGGGATCCAATTAGCAA
AAGGAATCTCGGACTTGCATTCCATTGGGCTGTTGGTGTTGAACTTGAAA
CCTTCCAACTTACTTCTTATTGAGCATGACCAACTGGTCCTTGGAGATTT
TGGGATCCCTTATCTGCTGCTTGGGAGGTCATTGTCTGATTCAGATATGG
CTCTCAGACTGGGAACTCCAAACTACATGGCCCCAGAACAGTGGGAACCG
GAAGTGAGGGGTCCTATATCTTTTGAGACAGATACGTGGGGCTTTGGATG
TAGTATAATGGAGATGTTGACAGGTATTCAACCCTGGTTTGGTAAATCAG
TTGAAGAAATTTATCATTCAGTTGTTATAAAGATAGATAAGCCACGTATT
CCCAGTGGCCTGCCTCCTGCTGTGGAGAATGTATTATTTGGTGCTTCGAG
TATGATCTCAGAAACCGTCCTCTAATGGCAGATTTCTTGCATGCTTTTTG
AAAGCTCGCAAAATGCTGTTTTCAATGATGGGGNAATGGCCTGGTTTATG
AAGCAGACCTCTTACTTGATCATCTAGCGTAAAAGGGTACACTGCCTGGG
TTCCTTTTGAAGATCATTCTCAGTGGGGTGAACCATCCGCTCAAGAATGC
ACTTTATGCCCGGAAACCGCAAACATGGGATGTCCCACATGGACCGGGGG
TGGTCTGGGATCCCGCCCCCATAAAAACACTTTTGTTAAATGATATTTCT
GGGTTGCA
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