EY659440

Overview
NameEY659440
Unique NameEY659440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_TRIEI (Trigger factor OS=Trichodesmium erythraeum (strain IMS101) GN=tig PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.920e-23
Identity = 66/265 (24.91%), Postives = 136/265 (51.32%), Query Frame = 3
Query:   30 DADESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQM-QAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRDMQKISXXPD 821
            + +    Q +P  + + F  D ++G + +PGF++ I G++  ETK     FP  + + +L G    FTV  +EL  ++LP+LDD LA + +    TI++++E L QK  + ++    Q  + AI+D+L   +E++IP++L + + +Q+     + + Q G+ + E       S + + E  E         +K++L +  + KRE++    E++  E +  + +LK++  ++D    R+ V   L    +++W+     +   P+
Sbjct:  183 ETEGEEAQEVPGGKAQDFQMDLKEG-QFIPGFIEGIVGMKLQETKEISAQFPSEYSEANLAGKPVVFTVTLKELKEKELPELDDDLAQE-ISEFETIDKLREFLEQKFTKEKEEKTKQNKEKAIIDELVTHLEVEIPETLIKNEVQQMLAQSAMDLSQYGIDVKE-----FFSSEKLPEMQERTRPEAIERLKRDLVIATVAKRESITVDEEEIKAESQKVVKQLKEK--DFDSDRLRQVVTQELLKEKTIKWLEANGTVELVPE 438          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_CALS8 (Trigger factor OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=tig PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.141e-22
Identity = 72/223 (32.29%), Postives = 122/223 (54.71%), Query Frame = 3
Query:  108 KVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREV-EQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-------SIAELKQQKPEYDEGSRREQVI 752
            + +PGF + + GI++GE K   + FPE ++ + L G +A F V+ +E+  ++LP+LDD  A K +    T+E++K ++  + +E  ++ AKD+  D AIL+++ +  EIDIP+ + E Q        +  +Q      E+ L A+   K  KEF E   E  T  I+ NL +  I K EN+Q + E+L KE+E         + +LK++  E D    +E +I
Sbjct:  194 RFIPGFEEQLIGIKKGEEKEIEVVFPEDYQSQELAGKKATFKVKVKEIKVKELPELDDEFA-KDVSEYETLEELKASIRNRIKEKNDKRAKDEMID-AILEKIAQATEIDIPEPMIENQINYYVEDVVRNLQYFGMTYEKYLEAIG--KTDKEFREQFRERATKAIRNNLILEKIAKVENIQATDEELEKELERLAKMYNLEVEKLKERLSEDDIEYIKEGII 412          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_NOSP7 (Trigger factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=tig PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.809e-21
Identity = 65/267 (24.34%), Postives = 137/267 (51.31%), Query Frame = 3
Query:   36 DESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQL--AALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRDMQKISXXPDENI 830
            + + ++ IP AE   F  + ++ DK +PGF+  I G+   ET+     FP+ +  E L G  A F V  +EL  ++LP+++D  A + +    T+E+++ +L+++ ++            A+L +L K VE+D+P +L E++         +  Q  M+L++Q L    L +   + +  E         IK++L++ ++ KRE+++ + E++   V+  + +  ++K E DE   R  V + L    +++W+ +   +   P+ ++
Sbjct:  188 ETAELEPIPGAEATDFQVELQE-DKFIPGFISGIVGMNPEETREIAAQFPDPYANEDLAGKAATFIVTLKELKEKELPEINDDFAQE-ISDFETLEELRASLVERYQKEADDKTKTNKQEALLTELLKHVEVDLPLTLVEQE------VDAMLTQTAMRLSQQGLDVRKLFTQDIIPQLRERSRTEAIERIKRSLSLREVGKRESIEVTPEEIGVRVKELLEQYPEEK-EVDEDRLRSIVENELLTEKTIDWLLEHSSVELVPEGSL 445          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_SYNJA (Trigger factor OS=Synechococcus sp. (strain JA-3-3Ab) GN=tig PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.174e-21
Identity = 63/278 (22.66%), Postives = 135/278 (48.56%), Query Frame = 3
Query:    9 DISATTIDADESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQL--LQMQAGMKLNE-QQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRDMQKISXXPDENIP 833
            D+      A ++    + +   + F  + ++ +  +PGF+  + G+Q  +TK     FP+ + ++ L G    FTV  +E+  ++LP+LDD+   + +    T+ +++E L ++  +      ++  + AIL+ + +  E+D+P++L E++  QL    L  LQ Q G+   E ++  +   P+ + + +E       N +++ LA+  I ++E +     +L  EVE  +A   QQ  + D    R+ V + L  +  + W++    ++    E  P
Sbjct:  170 DVVVIDFQARDAEGNPLEEIAAQDFQLELKE-ENFIPGFVAGVVGMQLDQTKEITATFPDDYFRKELAGKTVTFTVCLKEIKTKELPELDDAFVQE-ISEFQTVAELREHLQKRLEQDALRQSEENLETAILNAILETTEVDLPETLVEQETTQLLARSLQSLQQQQGVTPGEIRKFLSQLPPETLNQLMERHRPEAINRLRRTLALSAIVRQEQIAVGPNELEVEVEEVMAAYAQQGQKLDRERVRQAVHEDLLANKVMAWLKSQTTVNWVDSEGNP 445          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_SYNJB (Trigger factor OS=Synechococcus sp. GN=tig PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.068e-20
Identity = 68/278 (24.46%), Postives = 137/278 (49.28%), Query Frame = 3
Query:    9 DISATTIDADESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQ--MQAGMKLNE-QQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRDMQKISXXPDENIP 833
            D+      A ++    + +  T+ F  + ++ D  +PGF+  I G+Q  ETK     FP+ + ++ L G    F V  RE+  ++LP+LDD+   + +    T+ +++E L ++  +      ++  + AIL+ + +  E+D+P++L E++  QL  AQ LQ   Q G+K  E ++  +   P+ + +  E       + +++ LA+  I ++E +   + +L  EVE  +A   QQ  + D    R+ V + L  +  + W++    ++    E  P
Sbjct:  170 DVVVIDFAARDAEGNPLDEMTTQDFQLELKE-DNFIPGFVAGIVGMQLDETKEIAATFPDDYFRKELAGKTVTFIVCLREIKAKELPELDDAFVQE-ISSFQTVAELREHLQKRLEQDALRQSEENLETAILNAILETTEVDLPETLIEQETTQLL-AQSLQALRQEGIKPGELRKFLSELPPETLNQLKERHRPEAIDRLRRTLALSAIVRQEQIAVGSTELDVEVEEVMAAYAQQGQKLDRERVRQAVYESLLTNKVMAWLKSQTTVNWVDSEGNP 444          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_ANASP (Trigger factor OS=Anabaena sp. (strain PCC 7120) GN=tig PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.068e-20
Identity = 69/281 (24.56%), Postives = 138/281 (49.11%), Query Frame = 3
Query:   30 DADESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQL--AALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRR-----------EQVIDILEGS*SLEWVRDMQKISXXPDENIP 833
            D + +  + IP  +   F  + ++ D+ +PGF+  I G+  G+TK     FP+ +  + L G  A FTV  +E+  ++LP+L+D  A + +    T+E ++ +L ++ ++  +         A+L +L K +E+D+P++L E++         +  Q  M+L++Q L    L +   + +  E         +K++L + ++ KRE++  + E    E++  + EL QQ P+ D  + R           E++ID L  + ++E V +    S  P+   P
Sbjct:  186 DDENAEPEPIPGGDASDFQVELQE-DRFIPGFVTGIVGMNPGDTKEVSAQFPDPYVNQELAGKPAIFTVTLKEIKEKELPELNDDFAQE-VSDFDTLEALRASLAERYQKEAEDKTKNNQQEALLGELVKHIEVDLPETLIEKE------VDAMLTQTAMRLSQQGLDVKKLFTQDIIPQLRERSRPEAVERLKRSLGLQEVAKRESITVTPE----EIQARVTELVQQYPDEDIDAERLQTIVENELLSEKIIDWLLANSTVELVPEGSLASQEPEITAP 454          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_PROM3 (Trigger factor OS=Prochlorococcus marinus (strain MIT 9303) GN=tig PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.298e-20
Identity = 68/263 (25.86%), Postives = 134/263 (50.95%), Query Frame = 3
Query:   24 TIDADESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQM-QAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRDMQKIS 809
            T D D S ++      ++    D EDG +++PGF++ I G+  G  K+    FP+ + +E  RG +A F +  +EL  R+LP LDD+ A +      T+E+++  L Q+ +E  +        +A+L+ L + +E+D+P +L +++ R L      Q  Q GM      + ++ +P+ V+  +E+        ++++LA+  + + E+L+    ++  +V+    EL  ++ + D    R+ V D L     L+W+ D   I+
Sbjct:  184 TYDDDGSAIEG---GSSESMDVDLEDG-QMIPGFVEGIIGMSLGSEKTVDCHFPDDYSKEDARGRKASFVINLKELKTRELPDLDDAFA-QQSSDKATLEELRNDLEQRLQEDAKRRDRSNRHDALLEALTEQLEVDLPNTLVQQEIRNLVEQTASQFAQQGM-----DVKSMFTPELVRSLMESSRPEAEERLRRSLALTALAESEDLKIEESEISAKVKEVSRELSGER-DIDPARLRQAVSDDLLKDKLLDWLEDNSTIT 435          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_ANAVT (Trigger factor OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tig PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.920e-20
Identity = 67/266 (25.19%), Postives = 132/266 (49.62%), Query Frame = 3
Query:   30 DADESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQL--AALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRR-----------EQVIDILEGS*SLEWV 788
            D + +  + IP  +   F  + ++ DK +PGF+  I G+  G+TK     FP+ +  + L G  A FTV  +E+  ++LP+L+D  A + +    T+E ++ +L ++ ++  +         A+L +L K +E+D+P++L E++         +  Q  M+L++Q L    L +   + +  E         +K++L + ++ KRE++  + E    E++  + EL QQ P+ D    R           E++ID L  + ++E V
Sbjct:  186 DDENAEPEPIPGGDASDFQVELQE-DKFIPGFVTGIVGMNPGDTKEVSAQFPDPYVNQELAGKPAIFTVTLKEIKEKELPELNDDFAQE-VSDFDTLEALRASLAERYQKEAEDKTKNNQQEALLGELVKHIEVDLPETLIEKE------VDAMLTQTAMRLSQQGLDVKKLFTQDIIPQLRERSRPEAVERLKRSLGLQEVAKRESIAVTPE----EIQARVTELVQQYPDEDIDVERLHTIVENELLSEKIIDWLLANSTIELV 439          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_SYNP2 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tig PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.180e-19
Identity = 67/265 (25.28%), Postives = 127/265 (47.92%), Query Frame = 3
Query:   30 DADESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLL-PGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQM-QAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRDMQKISXXP 818
            DA E     IP  + + F  D E+G K +PGF+D   G++  ETK F + FPE +  E + G Q  FTV  +EL  R+LP+LDD  A +       T+   +E+L  + +E  + +   +    +L+QL      ++P+    E+   +   Q+++  + G+ +N      + +   + +  E         +  +L + +I K E ++  T+   + +E + AEL++    +DE   +E + + L    +L+W+ +  +I   P
Sbjct:  183 DAGEEEEDIIPGTQAEDFSLDLEEG-KFIPGFVDGFVGMKPEETKKFTVTFPEDYGNEEMAGKQVSFTVTLKELKSRELPELDDEFASEATNEEFETLAAWQESLEAQLKENAEISTKNSVRRYLLEQLAANNSTELPEVSVNEEITAVLTQQMMEFSRMGIDVNR-----IFTKDMIPKLRETARPEAEQRLSNSLILTEIAKVEKIEIDTDKFNERLEEAKAELQE---GFDEERLQEAIKEELTIDATLDWLEEQSEIEFVP 438          
BLAST of EY659440 vs. ExPASy Swiss-Prot
Match: TIG_PROMM (Trigger factor OS=Prochlorococcus marinus (strain MIT 9313) GN=tig PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.542e-19
Identity = 67/263 (25.48%), Postives = 133/263 (50.57%), Query Frame = 3
Query:   24 TIDADESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQM-QAGMKLNEQQLAALSSPKAVKEFLENQTENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKPEYDEGSRREQVIDILEGS*SLEWVRDMQKIS 809
            T D D S ++      +     D EDG +++PGF++ I G+  G+ K+    FP+ + +E  RG +A F +  +EL  R+LP LDD+ A +      T+E+++  L Q+ +E  +        +A+L+ L + +E+D+P +L +++ R L      Q  Q GM      + ++ +P+ V+  +E+        ++++ A+  + + E+L+    ++  +V+    EL  ++ + D    R+ V D L     L+W+ D   I+
Sbjct:  184 TYDDDGSAIEG---GSSDSMDVDLEDG-QMIPGFVEGIIGMNLGDEKTVDCHFPDDYSKEDARGRKASFVINLKELKTRELPDLDDAFA-QQSSDKATLEELRNDLEQRLQEDAKRRDRSNRHDALLEALTEQLEVDLPNTLVQQEIRNLVEQTASQFAQQGM-----DVKSMFTPELVRSLMESSRPEAEERLRRSFALTALAESEDLKIEESEISAKVKEVSRELSGER-DIDPARLRQAVSDDLLKDKLLDWLEDNSTIT 435          
The following BLAST results are available for this feature:
BLAST of EY659440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIG_TRIEI3.920e-2324.91Trigger factor OS=Trichodesmium erythraeum (strain... [more]
TIG_CALS81.141e-2232.29Trigger factor OS=Caldicellulosiruptor saccharolyt... [more]
TIG_NOSP72.809e-2124.34Trigger factor OS=Nostoc punctiforme (strain ATCC ... [more]
TIG_SYNJA8.174e-2122.66Trigger factor OS=Synechococcus sp. (strain JA-3-3... [more]
TIG_SYNJB1.068e-2024.46Trigger factor OS=Synechococcus sp. GN=tig PE=3 SV... [more]
TIG_ANASP1.068e-2024.56Trigger factor OS=Anabaena sp. (strain PCC 7120) G... [more]
TIG_PROM35.298e-2025.86Trigger factor OS=Prochlorococcus marinus (strain ... [more]
TIG_ANAVT6.920e-2025.19Trigger factor OS=Anabaena variabilis (strain ATCC... [more]
TIG_SYNP21.180e-1925.28Trigger factor OS=Synechococcus sp. (strain ATCC 2... [more]
TIG_PROMM1.542e-1925.48Trigger factor OS=Prochlorococcus marinus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659440 ID=EY659440; Name=EY659440; organism=Citrus sinensis; type=EST; length=920bp
CAATCGTTGATATATCAGCAACAACAATAGATGCAGATGAATCAAATGTT
CAAAATATTCCAGATGCAGAGACCAAAGGATTTCATTTTGATACAGAAGA
TGGGGACAAAGTTCTTCCAGGTTTTCTTGATTCTATAAGTGGAATTCAAC
GAGGTGAAACAAAGTCCTTTCGACTCGCATTCCCTGAATCCTGGAGACAA
GAACATCTTCGTGGTGTTCAAGCTCAATTTACTGTTGAATGCAGAGAACT
GTTTTATAGAGATTTGCCGAAATTGGATGACTCCCTTGCTGGAAAGCTTC
TTCCTGGATGCACTACCATAGAGCAGGTCAAGGAAACATTATTGCAGAAG
TGTCGAGAAGTGGAGCAAACTGCAAAAGACCAGGCGACTGATAATGCAAT
TCTAGACCAGCTTTACAAGATGGTGGAAATTGATATTCCTCAATCCTTGT
TTGAGGAACAAGGAAGGCAGCTTTATGGGGCTCAACTTTTGCAGATGCAG
GCAGGTATGAAATTGAACGAACAGCAGTTGGCTGCTCTATCAAGCCCAAA
AGCAGTAAAAGAGTTTCTGGAAAACCAGACGGAGAACATAACCAATGTGA
TAAAACAGAATCTAGCCGTCGGAGATATCTTTAAACGTGAAAATTTGCAG
TTTTCGACTGAAGACTTAGTCAAAGAAGTTGAAAACTCCATTGCTGAATT
AAAACAACAGAAACCAGAATATGATGAGGGATCGCGTAGAGAACAGGTGA
TAGACATACTCGAAGGGAGCTAAAGTCTCGAATGGGTGAGAGACATGCAG
AAAATCAGTNCANACCCAGATGAGAACATACCCCATATATGAAAAGGAGC
TAGGAGTTGCAGGAGCCGGATTAAAATTGCATTGCAGAGCATTGGTGCTC
TGCAAATTTTGATTGAAAAA
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