EY659430

Overview
NameEY659430
Unique NameEY659430
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 2.333e-105
Identity = 193/236 (81.78%), Postives = 206/236 (87.29%), Query Frame = 1
Query:   64 EANQRIARISAHLYPPNLQMEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            + NQRIARISAHL+PP  QMEE+S LR+A CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTG+DLV+IPAGVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAE                HAGVT LPLLSQVKPP ++++E
Sbjct:    6 DVNQRIARISAHLHPPKYQMEESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLERALTGMDLVVIPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPTAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVNVPVVGGHAGVTILPLLSQVKPPSSFTQE 241          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 5.197e-105
Identity = 192/236 (81.36%), Postives = 206/236 (87.29%), Query Frame = 1
Query:   64 EANQRIARISAHLYPPNLQMEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            + NQRIARISAHL+PP  QMEE+S LR+A CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTG+DL+I+PAGVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAE                HAGVT LPLLSQVKPP ++++E
Sbjct:    6 DVNQRIARISAHLHPPKSQMEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQE 241          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3)

HSP 1 Score: 369.392 bits (947), Expect = 1.565e-101
Identity = 187/241 (77.59%), Postives = 206/241 (85.48%), Query Frame = 1
Query:   49 MEFSSEANQRIARISAHLYPPNLQMEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            ME ++ A +R+ R+++HL PP  QMEE+  LR + CRAKG A GFKVAILGA+GGIGQPLA+LMK+NPLVSVLHLYDVVNTPGVTADISHM+TGAVVRGFLGQPQLENALTG+DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA VN+ISNPVNSTVPIAAEVFKKAGTYDPK+LLGVT LDVVRANTFVAE                HAGVT LPLLSQV PP +++ E
Sbjct:    1 MEDAAAAARRMERLASHLRPPASQMEESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLLSQVNPPCSFTSE 241          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 2.498e-99
Identity = 186/238 (78.15%), Postives = 201/238 (84.45%), Query Frame = 1
Query:   64 EANQRIARISAHLYPPNL--QMEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRE 771
            + NQRIARISAHL PPNL  Q+ + S L +  CRAKGG+ GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDV N PGVTADISHMDT AVVRGFLGQPQLE ALTG+DLVIIPAGVPRKPGMTRDDLFNINAGIVRTL E IAKCCP A VN+ISNPVNSTVPIAAEVFKKAGT+DPKKL+GVTMLDVVRANTFVAE                HAGVT LPLLSQVKPP +++++
Sbjct:    2 DPNQRIARISAHLNPPNLHNQIADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAIVNIISNPVNSTVPIAAEVFKKAGTFDPKKLMGVTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQK 239          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2)

HSP 1 Score: 357.836 bits (917), Expect = 4.711e-98
Identity = 180/239 (75.31%), Postives = 204/239 (85.36%), Query Frame = 1
Query:   49 MEFSSEANQRIARISAHLYPPNLQMEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYS 765
            ME +S A+ RI+RI+ HL P   Q E++ CL+++ CRAKGG +GFKVAILGAAGGIGQPLAMLMK+NPLVS+LHLYDVVNTPGVT+DISHMDTGAVVRGFLGQ QLE+AL G+DLVIIPAGVPRKPGMTRDDLFNINAGIV+TLCE IAKCCP A VN+ISNPVNSTVPIAAEVFK+AGTYDPK+LLGVTMLDVVRANTFVAE                HAG+T LPLLSQ+KPP +++
Sbjct:    1 MEANSGASDRISRIAGHLRP---QREDDVCLKRSDCRAKGGVSGFKVAILGAAGGIGQPLAMLMKMNPLVSLLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALIGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVNVISNPVNSTVPIAAEVFKRAGTYDPKRLLGVTMLDVVRANTFVAEVLGVDPRDVDVPVVGGHAGITILPLLSQIKPPCSFT 236          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.371e-97
Identity = 184/240 (76.67%), Postives = 201/240 (83.75%), Query Frame = 1
Query:   49 MEFSSEANQRIARISAHLYPPNLQME-ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYS 765
            MEF  +ANQRIARISAHL P   QME +NS + +  CRAKGG  GFKVAILGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTG+DLVIIPAG+PRKPGMTRDDLF INAGIV+TLCEG+AKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT LDV RANTFVAE                HAGVT LPLLSQVKPP +++
Sbjct:    1 MEFRGDANQRIARISAHLTP---QMEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFT 237          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.676e-95
Identity = 182/241 (75.52%), Postives = 199/241 (82.57%), Query Frame = 1
Query:   49 MEFSSEANQRIARISAHLYPP-NLQME-ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYS 765
            MEF  +AN+RIA ISAHL P    QME +NS + +  CRAKGG  GFKVAILGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTG+DLVIIPAGVPRKPGMTRDDLF INAGIV+TLCEG+AKCCPNA VNLISNPVNSTV IAAEVFKKAGTYDPKKLLGVT LDV RANTFVAE                HAGVT LPLLSQVKPP +++
Sbjct:    1 MEFRGDANKRIAMISAHLQPSFTPQMEAKNSVMGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLISNPVNSTVAIAAEVFKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFT 241          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2)

HSP 1 Score: 346.28 bits (887), Expect = 1.419e-94
Identity = 182/241 (75.52%), Postives = 197/241 (81.74%), Query Frame = 1
Query:   49 MEFSSEANQRIARISAHLYPP-NLQME-ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYS 765
            MEF  +A +RIA ISAHL P    QME +NS +    CRAKGG  GFKVAILGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTG+DLVIIPAGVPRKPGMTRDDLF INAGIVRTLCEG+AKCCPNA VNLISNPVNSTV IAAEVFKKAGTYDPKKLLGVT LDV RANTFVAE                HAGVT LPLLSQVKPP +++
Sbjct:    1 MEFRGDAYKRIAMISAHLQPSFTPQMEAKNSVMGLESCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRTLCEGVAKCCPNAIVNLISNPVNSTVAIAAEVFKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFT 241          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDHM_CITLA (Malate dehydrogenase, mitochondrial OS=Citrullus lanatus GN=MMDH PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.301e-67
Identity = 130/197 (65.99%), Postives = 148/197 (75.13%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKPPVAYSRET 774
            KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+  TPGV AD+ H++T + V G++G+ QL  AL G D+VIIPAGVPRKPGMTRDDLFNINAGIV++LC  IAK CPNA +N+ISNPVNSTVPIAAEVFKKAGTYD KKL GVT LDVVRA TF A                 HAG+T LPL SQ  P    S +T
Sbjct:   36 KVAVLGAAGGIGQPLALLMKLNPLVSKLALYDIAGTPGVAADVGHVNTRSEVTGYVGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNALINMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVAEVNVPVIGGHAGITILPLFSQATPRANLSDDT 232          
BLAST of EY659430 vs. ExPASy Swiss-Prot
Match: MDHM_EUCGU (Malate dehydrogenase, mitochondrial OS=Eucalyptus gunnii GN=MDH PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.634e-66
Identity = 128/189 (67.72%), Postives = 146/189 (77.25%), Query Frame = 1
Query:  184 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTNLPLLSQVKP 750
            KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+  TPGV AD+ H++T + V G++G+ QL  AL G D+VIIPAGVPRKPGMTRDDLFNINAGIV++LC  IAK CPNA VN+ISNPVNSTVPIAAE+FKKAGTY+ KKLLGVT LDVVRA TF A                 HAG+T LPL SQ  P
Sbjct:   36 KVAVLGAAGGIGQPLALLMKLNPLVSQLALYDIAGTPGVAADVGHINTRSEVAGYVGEEQLGQALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNAVVNMISNPVNSTVPIAAEIFKKAGTYNEKKLLGVTTLDVVRAKTFYAGKAKVPVEEVNVPVVGGHAGITILPLFSQAVP 224          
The following BLAST results are available for this feature:
BLAST of EY659430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 303
Match NameE-valueIdentityDescription
MDHG_CUCSA2.333e-10581.78Malate dehydrogenase, glyoxysomal OS=Cucumis sativ... [more]
MDHG_CITLA5.197e-10581.36Malate dehydrogenase, glyoxysomal OS=Citrullus lan... [more]
MDHG_ORYSJ1.565e-10177.59Malate dehydrogenase, glyoxysomal OS=Oryza sativa ... [more]
MDHG2_ARATH2.498e-9978.15Probable malate dehydrogenase, glyoxysomal OS=Arab... [more]
MDHG_SOYBN4.711e-9875.31Malate dehydrogenase, glyoxysomal OS=Glycine max P... [more]
MDHG1_ARATH1.371e-9776.67Malate dehydrogenase, glyoxysomal OS=Arabidopsis t... [more]
MDHG2_BRANA1.676e-9575.52Malate dehydrogenase 2, glyoxysomal OS=Brassica na... [more]
MDHG1_BRANA1.419e-9475.52Malate dehydrogenase 1, glyoxysomal OS=Brassica na... [more]
MDHM_CITLA4.301e-6765.99Malate dehydrogenase, mitochondrial OS=Citrullus l... [more]
MDHM_EUCGU1.634e-6667.72Malate dehydrogenase, mitochondrial OS=Eucalyptus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-A09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659430 ID=EY659430; Name=EY659430; organism=Citrus sinensis; type=EST; length=898bp
ATGTATCATTATTGATCACATTCACACCACCATACTTCAACAAAGAAAAT
GGAGTTTAGCTCAGAGGCTAATCAGCGCATTGCTAGAATCTCTGCTCATC
TTTACCCTCCAAATCTCCAGATGGAGGAGAATTCTTGCTTGAGGCAAGCT
AAATGCCGGGCAAAAGGCGGGGCAGCTGGATTCAAAGTAGCCATCTTGGG
TGCTGCTGGAGGCATTGGTCAACCCCTTGCAATGCTAATGAAGATAAACC
CCCTGGTCTCAGTCCTTCACCTCTATGATGTTGTCAATACCCCTGGTGTC
ACTGCTGATATTAGCCATATGGACACCGGCGCTGTGGTACGGGGTTTCCT
AGGCCAGCCACAGCTTGAGAATGCTCTCACAGGGGTGGACCTTGTCATTA
TCCCTGCCGGCGTTCCGAGGAAGCCTGGAATGACCAGGGATGATCTTTTC
AATATCAATGCTGGAATTGTCAGGACACTCTGTGAAGGCATCGCAAAGTG
TTGCCCCAATGCGACTGTCAATTTGATCAGTAATCCAGTGAACTCTACAG
TTCCTATTGCCGCAGAGGTTTTCAAGAAAGCTGGTACTTATGATCCAAAG
AAACTCTTGGGAGTTACAATGCTCGATGTCGTAAGAGCCAACACATTCGT
GGCGGAAGTTTTGGGACTTGATCCTANGGATGTTGATGTTCCTGTTGTTG
GAGGTCATGCTGGAGTAACAAATTTGCCACTTTTATCACAGGTTAAGCCT
CCTGTAGCTTACTCAAGAGAAACTGATACCTGACGAACGCATACAAATGG
TGGACAAANNTNNGTGAGCAAAGCTGGGGCTGGCTCTGCACACTCTCATG
GCTATGCAGCGGTTAAATTTGCGATCTGCCTCGTGGGCTGAAAGAAAG
back to top