EY659398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659398 vs. ExPASy Swiss-Prot
Match: THF1_ORYSJ (Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.588e-36 Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 1 Query: 571 RIDAQKLEEWARGQTASSLVEFPSKEGEVEGILNDIAERASGKGNFSYSRFFAVGLFRLLELAXCTEPTVLEKLCAVLNVKQRSVDRDLDVYRN 852 R DAQK+EEWAR Q +SLVEF SK+GE+E IL DI+ERA GKG+FSYSRFFAVGLFRLLELA TEPT+L+KLCA LN+ +RSVDRDLDVYRN Sbjct: 146 RADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKDISERAQGKGSFSYSRFFAVGLFRLLELANATEPTILDKLCAALNINKRSVDRDLDVYRN 239 HSP 2 Score: 114.39 bits (285), Expect = 8.924e-25 Identity = 53/63 (84.13%), Postives = 59/63 (93.65%), Query Frame = 1 Query: 1 QELFLQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRS 189 QEL +QQHLMRYK TYQYD VFALGFVTVYD+LMEGYPS+EDR+AIF+AYITAL EDPEQYR+ Sbjct: 85 QELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLMEGYPSNEDRDAIFKAYITALNEDPEQYRA 147
BLAST of EY659398 vs. ExPASy Swiss-Prot
Match: THF1_ARATH (Protein THYLAKOID FORMATION 1, chloroplastic OS=Arabidopsis thaliana GN=THF1 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.052e-33 Identity = 69/94 (73.40%), Postives = 81/94 (86.17%), Query Frame = 1 Query: 571 RIDAQKLEEWARGQTASSLVEFPSKEGEVEGILNDIAERASGKGNFSYSRFFAVGLFRLLELAXCTEPTVLEKLCAVLNVKQRSVDRDLDVYRN 852 RIDAQK+EEWAR QT++SLV+F SKEG++E +L DIA RA K FSYSRFFAVGLFRLLELA T+PTVL+KLCA LN+ ++SVDRDLDVYRN Sbjct: 152 RIDAQKMEEWARSQTSASLVDFSSKEGDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVDRDLDVYRN 245 HSP 2 Score: 113.62 bits (283), Expect = 1.522e-24 Identity = 51/62 (82.26%), Postives = 59/62 (95.16%), Query Frame = 1 Query: 1 QELFLQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYR 186 QEL +QQHLMRYK+TY+YDPVFALGFVTVYD+LMEGYPSD+DR+AIF+AYI AL EDP+QYR Sbjct: 91 QELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYR 152
BLAST of EY659398 vs. ExPASy Swiss-Prot
Match: THF1_SOLTU (Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum tuberosum GN=THF1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.419e-32 Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 1 Query: 571 RIDAQKLEEWARGQTASSLVEFPSKEGEVEGILNDIAERASGKGNFSYSRFFAVGLFRLLELAXCTEPTVLEKLCAVLNVKQRSVDRDLDVYRN 852 R DAQKLEEWAR Q A++LV+F SKEGE+E I DIA+RA K F YSR FAVGLFRLLELA T+PT+LEKLCA LNV ++SVDRDLDVYRN Sbjct: 153 RADAQKLEEWARTQNANTLVDFSSKEGEIENIFKDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILEKLCAALNVNKKSVDRDLDVYRN 246 HSP 2 Score: 114.005 bits (284), Expect = 1.166e-24 Identity = 52/63 (82.54%), Postives = 59/63 (93.65%), Query Frame = 1 Query: 1 QELFLQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYRS 189 QEL +QQHL RYK++YQYDPVFALGFVTVYD+LMEGYPS+EDR AIF+AYI ALKEDPEQYR+ Sbjct: 92 QELIVQQHLTRYKKSYQYDPVFALGFVTVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRA 154
BLAST of EY659398 vs. ExPASy Swiss-Prot
Match: THF1_CYAP7 (Protein thf1 OS=Cyanothece sp. (strain PCC 7424) GN=thf1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 1 QELFLQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEQYR 186 +EL ++ HL+ +QYDPV+ALG VT + R M+GY D D+E+IF A ++ DP+QYR Sbjct: 31 EELMVEMHLLSVNSDFQYDPVYALGVVTSFQRFMQGYRPDADKESIFNALCQSVGGDPQQYR 92 The following BLAST results are available for this feature:
BLAST of EY659398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659398 ID=EY659398; Name=EY659398; organism=Citrus sinensis; type=EST; length=890bpback to top |