EY659396

Overview
NameEY659396
Unique NameEY659396
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659396_ssr156 microsatellite EY659396_ssr156:156..177. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659396 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.521e-30
Identity = 63/75 (84.00%), Postives = 68/75 (90.67%), Query Frame = 3 
Query:  441 LGTAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 665
            L  +EALA QVTQENFDKGL+YPPF NIRKISAHIAA VAAKAYELGLATRLP P++LVKYAESCMYSP YR+YR
Sbjct:  517 LAASEALARQVTQENFDKGLIYPPFSNIRKISAHIAANVAAKAYELGLATRLPQPENLVKYAESCMYSPVYRSYR 591
[Close]
BLAST of EY659396 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.386e-27
Identity = 59/75 (78.67%), Postives = 66/75 (88.00%), Query Frame = 3 
Query:  441 LGTAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 665
            L  +EALA QVTQE+FD GL+YPPF NIRKISAHIAA+VAAKAYELGLA+RLP P++LV YAESCMYSP YR YR
Sbjct:  573 LAASEALAEQVTQEHFDNGLIYPPFTNIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRNYR 647
[Close]
BLAST of EY659396 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.287e-26
Identity = 57/75 (76.00%), Postives = 67/75 (89.33%), Query Frame = 3 
Query:  441 LGTAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 665
            L  +EALA QV++EN+DKGL+YPPF NIRKISA+IAA+VAAKAY+LGLA+ L  PKDLVKYAESCMYSP YR+YR
Sbjct:  515 LAASEALAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLASHLKRPKDLVKYAESCMYSPGYRSYR 589
[Close]
BLAST of EY659396 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.867e-26
Identity = 55/75 (73.33%), Postives = 64/75 (85.33%), Query Frame = 3 
Query:  441 LGTAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 665
            L  ++ALA Q TQ+NF+KG ++PPF +IRKISAHIAA VA KAYELGLATRLPPP DLVKYAE+CMY+P YR YR
Sbjct:  562 LAASKALADQATQDNFEKGSIFPPFTSIRKISAHIAAAVAGKAYELGLATRLPPPSDLVKYAENCMYTPVYRNYR 636
[Close]
BLAST of EY659396 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.386e-26
Identity = 57/75 (76.00%), Postives = 66/75 (88.00%), Query Frame = 3 
Query:  441 LGTAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 665
            L  +EALA QVT E+F KGL+YPPFK+IRKISAHIAA VAAKAYELGLA+RLP P DLVK+AESCMY+P YR++R
Sbjct:  511 LAASEALASQVTGEHFIKGLIYPPFKDIRKISAHIAAGVAAKAYELGLASRLPQPADLVKFAESCMYNPTYRSFR 585
[Close]
BLAST of EY659396 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 6.386e-26
Identity = 56/75 (74.67%), Postives = 63/75 (84.00%), Query Frame = 3 
Query:  441 LGTAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 665
            L  +E LA Q TQENF+KG ++PPF NIRKISA IAA VAAKAYELGLATRLP P+DL KYAESCMY+P YR+YR
Sbjct:  565 LAASETLADQATQENFEKGSIFPPFTNIRKISARIAASVAAKAYELGLATRLPQPRDLEKYAESCMYTPVYRSYR 639
[Close]
BLAST of EY659396 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.341e-26
Identity = 57/75 (76.00%), Postives = 66/75 (88.00%), Query Frame = 3 
Query:  441 LGTAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 665
            L  +EA A QVTQE+FDKGL++PPF +IRKISAHIAA+VAAKAYELGLA+RLP P++LV YAESCMYSP YR YR
Sbjct:  574 LAASEAPAEQVTQEHFDKGLIFPPFTSIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRIYR 648
[Close]
BLAST of EY659396 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.169e-25
Identity = 59/75 (78.67%), Postives = 65/75 (86.67%), Query Frame = 3 
Query:  441 LGTAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 665
            L  +EALA +V+QENF+KG   PPF NIRKISAHIA +VAAKAYELGLATRLP PKDLV YAESCMYSPAYR+YR
Sbjct:  500 LVASEALADEVSQENFEKGTHIPPFSNIRKISAHIA-KVAAKAYELGLATRLPQPKDLVAYAESCMYSPAYRSYR 573
[Close]
BLAST of EY659396 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 1.204e-24
Identity = 56/75 (74.67%), Postives = 62/75 (82.67%), Query Frame = 3 
Query:  441 LGTAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 665
            L  AEALAGQ+ +E   KGL+YPP  NIRKIS  IAA VAAKAYELGLATRLP P++LVK+AESCMYSPAYR YR
Sbjct:  517 LAAAEALAGQIKEEYLAKGLIYPPLSNIRKISVQIAANVAAKAYELGLATRLPRPENLVKHAESCMYSPAYRYYR 591
The following BLAST results are available for this feature:
BLAST of EY659396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MAOX_VITVI9.521e-3084.00NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOC_FLAPR3.386e-2778.67NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_PHAVU1.287e-2676.00NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_MAIZE2.867e-2673.33NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_MESCR6.386e-2676.00NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_ORYSJ6.386e-2674.67NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_FLATR8.341e-2676.00NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_SOLLC3.169e-2578.67NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOX_POPTR1.204e-2474.67NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659396 ID=EY659396; Name=EY659396; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGCAAAATTCTTTCCCGCTTTTGATAGAAGTGTTTTTAGTT
TTCCTATATTATCATGATAACCAGACCACACCTGCTGGAGGAAATGTATT
AGGTCTCAGCAATTGGTGGGATAGAACTTTCTGTATAAATTGACGTGTTT
TGCTCCTCTCTCTCTCTCTCTCTCTCTTGTTCAATAGGATTGAAGTTTAA
TATTCATTTTGATAGTATGACAAAATCAGCTTAATTTTTCCAAGCTGCAT
CCTGGATAAATTGGTAGATAGTAGTAAAAGCTCTTTTGAGATGTTTTACC
AATAATTATTGTGCCATGAAAAACTTTTTGAGATGTTTTACCAAAGTATG
TTGTTCTTAGTAAAATGATCCTTAATGAGTTTGAATATCACTCAAGAAAA
ACATCTCCCCGGAATTTAAGTGATGAGTCATTTACATTTTCTTGGTACAG
CGGAAGCATTGGCTGGACAAGTAACACAGGAAAACTTTGACAAGGGACTC
CTTTACCCTCCATTTAAGAACATCAGAAAGATTTCAGCTCATATTGCTGC
AGAAGTAGCTGCAAAAGCATACGAACTTGGTTTGGCGACTCGCCTCCCTC
CGCCTAAGGACCTGGTGAAGTATGCTGAGAGCTGCATGTACAGCCCTGCT
TATCGAACCTACCGGTGAAATGGGAGGAAATTCATACAATTGCTGTTTTG
GAGNTCACATTACTCGTAATACTAGTCTGTTCTTTTATTTTTTTACCTTG
GGCTCCTTTTTTAAATGGTACTTCCTCTTCCTCCCTTCTTCTGTTGAGTC
ACATAAGCTACCCTGGTGGGTAAGAATCANCATGGTGGGTAGTGGTAGGT
GCTGCATCTAGCAAAGTCNAAAATATAGCATGAAAATGATGTTGTTGTGG
ACTCGGAGAT
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