EY705318

Overview
NameEY705318
Unique NameEY705318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY705318 vs. ExPASy Swiss-Prot
Match: HSF30_SOLPE (Heat shock factor protein HSF30 OS=Solanum peruvianum GN=HSF30 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.084e-17
Identity = 47/102 (46.08%), Postives = 67/102 (65.69%), Query Frame = 2 
Query:    2 SQPTRPEIETFLSSPVDNESSSDIDNPNAGSLPAPSGGNFSSVNETIWEDFMADDLIAGD--PEEVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYL 301
            S+     IE   S+ +DNESSS++      S+   +G +   V + IWE+ +++DLI+GD   EEVVV +Q E +VE+EDLV    +WGEELQDLVDQ+G+L
Sbjct:  253 SEAELASIEMLFSAAMDNESSSNV---RPDSVVTANGTDMEPVADDIWEELLSEDLISGDRAAEEVVVVEQPEFDVEVEDLVVKTPEWGEELQDLVDQLGFL 351
The following BLAST results are available for this feature:
BLAST of EY705318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
HSF30_SOLPE8.084e-1746.08Heat shock factor protein HSF30 OS=Solanum peruvia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-042-C03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705318 ID=EY705318; Name=EY705318; organism=Citrus sinensis; type=EST; length=833bp
TTCCCAACCCACGCGTCCGGAGATAGAGACTTTCCTTTCTTCGCCGGTGG
ACAACGAATCAAGCAGTGATATCGACAACCCAAATGCTGGTTCACTACCT
GCCCCAAGTGGTGGCAATTTCAGTAGTGTCAATGAGACAATATGGGAGGA
TTTTATGGCTGACGATCTGATTGCCGGCGATCCGGAAGAAGTGGTGGTGA
AGGATCAGTCAGAGGCTGAGGTGGAATTGGAGGATTTGGTTGCAACACCT
ACAGATTGGGGTGAGGAATTGCAAGACCTAGTAGATCAGATGGGTTATCT
CAGGTGACAAACTATTGCTGCACAGAATTGTTGAAAGACTTCCCTAGGCT
GAGTTGGTCTCTGCAACTTCATTCCTGTTTCTGTAGTGCTGGAAGTCGCG
AAGTTGCAAAGAGGCCAACGATATTTGTTCCTGTTCTACTGTATCCTTAA
GTGATAATAGAGTCTCGATTTTTTGTTTGTAATGTCTAGTGTTTCCCTTT
TTGATCCTTTGCACCACTTTAATGTTTTATATTTTCTTGCCACATGTTGC
AGGCGGACTCCAAAAGAAGGAGGAGTTTCAACCGTGATGATTTCAGAATA
TGCTCAAAGTCAGCTGCCTAATCTGCTTGCACTCTGGACTTTTTGCAGTT
CTTGGCCATTATATTTGTCNTGNGTTTATATCAGCTGGCAGATTACAGAT
ATGTAAATACCCAAGGGCTGGTGCAGACTAATTTGATTTTACTATAGCTG
AATACTCCTTTTTGGATTATGAGAAAATCACCAATTTATAGGGTCCAATA
AAATCCGATGGATTCTTTATTAAAAAAAAAAAA
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