EY705313

Overview
NameEY705313
Unique NameEY705313
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK4_SPIOL (Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea GN=NDK4 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.146e-53
Identity = 81/155 (52.26%), Postives = 103/155 (66.45%), Query Frame = 1
Query:  196 TILSLQENNNRKYFM*LYDIIALNINCTKLRLPFSSKISDLN-----FSFVLFFIIAAYMLQEQEVHAAEVL*SLI*MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            + LS  +N + ++      + A      +++ P+ +     N      S  L    AAY+LQ+QE  AAE        ERTFIAIKPDGVQRGLISEI++RFERKGFKLVAIK+V+PSK+FAQKHYHDL ERPFFNGLC+FLSSGP  ++ W G+
Sbjct:   15 SFLSSSKNASSRFLPEGRTVAATAAVSLRVKAPYLASFGGANASGTWMSTALAIPAAAYLLQDQEACAAE-------FERTFIAIKPDGVQRGLISEIVARFERKGFKLVAIKVVIPSKDFAQKHYHDLSERPFFNGLCDFLSSGPVVAMVWEGE 162          

HSP 2 Score: 83.9593 bits (206), Expect = 2.146e-53
Identity = 48/79 (60.76%), Postives = 53/79 (67.09%), Query Frame = 3
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARD-RKDEINCGSNPKTG*LHKH-AEKWVY 848
            V+AMVWEGE  I YGRKLIGATDPQKSEPG IRGDLA VV RN   G    +  KDEI     P+    + H AEKW+Y
Sbjct:  154 VVAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVNYTHNAEKWIY 232          
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK3_ARATH (Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDPK3 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.753e-53
Identity = 77/98 (78.57%), Postives = 85/98 (86.73%), Query Frame = 1
Query:  349 AAYMLQEQEVHAAEVL*SLI*MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYG 636
            AAYM+Q+QEV AAE       MERTFIAIKPDGVQRGLISEIISRFERKGFKLV IK++VPSK+FAQKHYHDLKERPFFNGLC+FLSSGP  ++ W G
Sbjct:   74 AAYMIQDQEVLAAE-------MERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKERPFFNGLCDFLSSGPVIAMVWEG 164          

HSP 2 Score: 78.1814 bits (191), Expect = 4.753e-53
Identity = 45/79 (56.96%), Postives = 53/79 (67.09%), Query Frame = 3
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARD-RKDEINCGSNPKTG*LH-KHAEKWVY 848
            VIAMVWEG+  I YGRKLIGATDPQKSEPG IRGDLA  V RN   G    +  KDEI+    P+    +  ++EKW+Y
Sbjct:  157 VIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHGSDGPETAKDEISLWFKPQELVSYTSNSEKWLY 235          
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK4_ARATH (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDK4 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 3.964e-52
Identity = 74/99 (74.75%), Postives = 83/99 (83.84%), Query Frame = 1
Query:  349 AAYMLQEQEVHAAEVL*SLI*MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            AA+MLQ+QE  AAE       MERTFIAIKPDGVQRGLISEII+RFERKG+KLV IK++VPSK FAQKHYHDLKERPFFNGLC FLSSGP  ++ W G+
Sbjct:   73 AAFMLQDQEALAAE-------MERTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFNGLCNFLSSGPVVAMVWEGE 164          

HSP 2 Score: 82.4185 bits (202), Expect = 3.964e-52
Identity = 47/79 (59.49%), Postives = 54/79 (68.35%), Query Frame = 3
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARD-RKDEINCGSNPKTG*LH-KHAEKWVY 848
            V+AMVWEGE  I YGRKLIGATDPQKSEPG IRGDLA VV RN   G    +  KDEI+    P+    +  +AEKW+Y
Sbjct:  156 VVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEISLWFKPEELVSYTSNAEKWIY 234          
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_PROMT (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=ndk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.864e-33
Identity = 49/78 (62.82%), Postives = 64/78 (82.05%), Query Frame = 1
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            +ERTF+AIKPDGVQRGLI+EI+ RFE KGFKLV +K + PSKE A+KHY   K+RPFF+GL +F++SGP  ++ W G+
Sbjct:    3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVIAMVWEGE 80          

HSP 2 Score: 58.151 bits (139), Expect = 4.864e-33
Identity = 30/47 (63.83%), Postives = 33/47 (70.21%), Query Frame = 3
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            VIAMVWEGE  I   RKLIGAT P ++EPG IRGDLA  + RN   G
Sbjct:   72 VIAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHG 118          
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_PROM1 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=ndk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.335e-33
Identity = 49/78 (62.82%), Postives = 64/78 (82.05%), Query Frame = 1
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            +ERTF+AIKPDGVQRGLI+EI+ RFE KGFKLV +K + PSKE A+KHY   K+RPFF+GL +F++SGP  ++ W G+
Sbjct:    3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVVAMVWEGE 80          

HSP 2 Score: 57.7658 bits (138), Expect = 6.335e-33
Identity = 29/47 (61.70%), Postives = 33/47 (70.21%), Query Frame = 3
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V+AMVWEGE  I   RKLIGAT P ++EPG IRGDLA  + RN   G
Sbjct:   72 VVAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHG 118          
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_PROMS (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain AS9601) GN=ndk PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 8.251e-33
Identity = 49/77 (63.64%), Postives = 61/77 (79.22%), Query Frame = 1
Query:  415 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            ERTFIAIKPDGVQRG +SEI+ RFE+KGFKLV +K ++PSKE AQ HY   +ERPFF  L +F+SSGP  ++ W G+
Sbjct:    4 ERTFIAIKPDGVQRGYVSEILGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGE 80          

HSP 2 Score: 59.3066 bits (142), Expect = 8.251e-33
Identity = 35/63 (55.56%), Postives = 39/63 (61.90%), Query Frame = 3
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARD-RKDEINCGSN 803
            V+AMVWEGE  I   RKLIGAT P ++EPG IRGDLA  + RN   G    D  K EIN   N
Sbjct:   72 VVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEINLWFN 134          
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_PROMA (Nucleoside diphosphate kinase OS=Prochlorococcus marinus GN=ndk PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 1.747e-32
Identity = 50/77 (64.94%), Postives = 62/77 (80.52%), Query Frame = 1
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYG 636
            +ERTF+AIKPDGVQRGL+ EI+ RFERKGFKLV +K ++PSKE A+KHY   KERPFF GL  F++SGP  ++ W G
Sbjct:    3 VERTFLAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLIPSKELAEKHYGVHKERPFFTGLVGFITSGPVVAMVWEG 79          

HSP 2 Score: 54.299 bits (129), Expect = 1.747e-32
Identity = 27/47 (57.45%), Postives = 32/47 (68.09%), Query Frame = 3
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V+AMVWEG+  I   RKLIGAT P ++EPG IRGDL   + RN   G
Sbjct:   72 VVAMVWEGDGVILSARKLIGATKPLEAEPGTIRGDLGINIGRNVIHG 118          

HSP 3 Score: 21.557 bits (44), Expect = 1.747e-32
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 2
Query:  740 KKLIHGSDGP 769
            + +IHGSDGP
Sbjct:  113 RNVIHGSDGP 122          
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_SYNS3 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9311) GN=ndk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.823e-32
Identity = 48/76 (63.16%), Postives = 61/76 (80.26%), Query Frame = 1
Query:  415 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYG 636
            ER+FIAIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+E A++HY   KERPFF GL +F++SGP  ++ W G
Sbjct:    4 ERSFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFGGLVDFITSGPVVAMVWEG 79          

HSP 2 Score: 58.9214 bits (141), Expect = 1.823e-32
Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 3
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARDRKD-EINCGSNP 806
            V+AMVWEG+  IT  RK+IGAT P ++EPG IRGDLA  + RN   G  A +  + EI    NP
Sbjct:   72 VVAMVWEGDGVITSARKMIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAEFEIGLWFNP 135          
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.095e-32
Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 1
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            ME+TFI IKPDGVQRGL+ EIISRFE+KGF L A+K V   + FA+KHY DL  +PFFNGL E++ SGP  ++ W GK
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGK 78          

HSP 2 Score: 58.151 bits (139), Expect = 3.095e-32
Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = 3
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARD 773
            V+AMVWEG+  +  GRKLIGAT+P  SEPG IRGD A  + RN   G  A D
Sbjct:   70 VVAMVWEGKGVVATGRKLIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVD 121          
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_PROM0 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ndk PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 4.027e-32
Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = 1
Query:  415 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            ERTFIAIKPDGVQRG +SEII RFE+KGFKLV +K ++PSKE AQ HY   +ERPFF  L +F+SSGP  ++ W G+
Sbjct:    4 ERTFIAIKPDGVQRGYVSEIIGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGE 80          

HSP 2 Score: 56.225 bits (134), Expect = 4.027e-32
Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 3
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARD 773
            V+AMVWEGE  I   RKLIG+T P ++EPG IRGDLA  + RN   G    D
Sbjct:   72 VVAMVWEGEGVILSARKLIGSTKPLEAEPGTIRGDLAIDIGRNIIHGSDGED 123          
The following BLAST results are available for this feature:
BLAST of EY705313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK4_SPIOL2.146e-5352.26Nucleoside diphosphate kinase 4, chloroplastic OS=... [more]
NDK3_ARATH4.753e-5378.57Nucleoside diphosphate kinase III, chloroplastic/m... [more]
NDK4_ARATH3.964e-5274.75Nucleoside diphosphate kinase IV, chloroplastic/mi... [more]
NDK_PROMT4.864e-3362.82Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROM16.335e-3362.82Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROMS8.251e-3363.64Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROMA1.747e-3264.94Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_SYNS31.823e-3263.16Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK1_SPIOL3.095e-3262.82Nucleoside diphosphate kinase 1 OS=Spinacia olerac... [more]
NDK_PROM04.027e-3264.94Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-042-B10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705313 ID=EY705313; Name=EY705313; organism=Citrus sinensis; type=EST; length=922bp
TGCAGACCCACGCGTCCGGTTTTCTGATTATCTTTATGTCTGTTTTGCAA
GTTGTTACTGACTGCACTTCATATTATGAAAATCTGCAAGCCAAAGTTTC
TTATCAATCTGATAAAACCTTCACTCTCTTTACTAAAGGTGGATCTAAAA
GAAGAAATTAATATTGTTGATAAAAGCTTGGATAACCATTTCTTCACAAT
TTTATCTCTTCAAGAGAACAATAATAGGAAATATTTTATGTAACTTTATG
ACATCATAGCTTTGAATATTAATTGCACGAAGTTGCGCCTTCCTTTTTCC
TCCAAAATCTCTGATCTTAATTTTTCCTTTGTGCTTTTCTTTATTATTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGGTACTTTAAT
CACTGATCTAAATGGAACGCACTTTCATTGCCATCAAGCCAGATGGGGTG
CAAAGAGGACTGATTTCAGAAATCATCTCTCGCTTTGAGCGCAAAGGCTT
TAAGCTTGTGGCCATTAAGATAGTAGTTCCATCAAAAGAGTTTGCACAAA
AACATTATCATGATCTGAAGGAAAGACCCTTCTTTAATGGCCTGTGCGAG
TTCCTTAGCTCTGGTCCGTCATTGCCATGGTATGGGAAGGAGAGGNNAGT
ATTACGTATGGTCGCAAACTCATTGGAGCCACAGATCCTCAGAAATCAGA
ACCTGGAAACATCAGAGGCGATCTAGCTGGTGTTGTTTGAAGAAACTCAT
TCATGGGAGTGATGGCCCGAGACCGCAAGGATGAAATAAATTGTGGGTCC
AACCCCAAGACTGGTTAATTACACAAGCATGCAGAGAAGTGGGTCTATGA
ATCCACTGATTACATTTTTCTCTACTTTATTAAAACTAAGGCCTACTGAA
TAGGGGATAAAAGCATAATGGT
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