EY659334

Overview
NameEY659334
Unique NameEY659334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length445
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8125 contig Csv1_Contig8125:1287..1731. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659334 vs. ExPASy Swiss-Prot
Match: S5A1_HUMAN (3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Homo sapiens GN=SRD5A1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.613e-12
Identity = 38/112 (33.93%), Postives = 61/112 (54.46%), Query Frame = 1
Query:   64 DLKFL-GMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVNSIFPYIF 396
            D +FL G  L+L G+  N +  ++L  +R+ G+  YKIP  GLF+ V   +Y  EI+ + G    + ++    +A     +L GR+     WYL KFE++PK    I P++F
Sbjct:  148 DPRFLIGFGLWLTGMLINIHSDHILRNLRKPGDTGYKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKEHHEWYLRKFEEYPKFRKIIIPFLF 259          
BLAST of EY659334 vs. ExPASy Swiss-Prot
Match: S5A2_MACFA (3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Macaca fascicularis GN=SRD5A2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.107e-12
Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 1
Query:   64 DLKF-LGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVNSIFPYIF 396
            D++F LG+ LF+LG+  N +   +L ++R+ GE  Y+IP  GLF  V   ++L EI+ + G      +L A  +A     +L  R++    +YL  FED+PK   ++ P+IF
Sbjct:  143 DIRFCLGVFLFILGMGVNIHSDYILRQLRKPGEITYRIPKGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSVCFLGLRAFHHHRFYLKMFEDYPKSRKALIPFIF 254          
BLAST of EY659334 vs. ExPASy Swiss-Prot
Match: S5A1_MACFA (3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Macaca fascicularis GN=SRD5A1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.107e-12
Identity = 37/112 (33.04%), Postives = 61/112 (54.46%), Query Frame = 1
Query:   64 DLKFL-GMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVNSIFPYIF 396
            D +FL G  L+L G+  N +  ++L  +R+ G+  YKIP  GLF+ V   +Y  EI+ + G    + ++    +A     +L GR+     WYL KFE++PK    + P++F
Sbjct:  152 DPRFLIGFGLWLAGMLINIHSDHILRNLRKPGDTGYKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKEHHRWYLQKFEEYPKFRKILIPFLF 263          
BLAST of EY659334 vs. ExPASy Swiss-Prot
Match: S5A2_HUMAN (3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Homo sapiens GN=SRD5A2 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.752e-12
Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 1
Query:   64 DLKF-LGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVNSIFPYIF 396
            D++F LG+ LF+LG+  N +   +L ++R+ GE  Y+IP  GLF  V   ++L EI+ + G      +L A  +A     +L  R++    +YL  FED+PK   ++ P+IF
Sbjct:  143 DIRFSLGVFLFILGMGINIHSDYILRQLRKPGEISYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCFLGLRAFHHHRFYLKMFEDYPKSRKALIPFIF 254          
BLAST of EY659334 vs. ExPASy Swiss-Prot
Match: S5A2_PIG (3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Sus scrofa GN=SRD5A2 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.694e-12
Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 1
Query:   64 DLKF-LGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVNSIFPYIF 396
            D++F LG+ LF+LG+  N +   +L ++R+ GE  YKIP  GLF  V   ++L EI+ + G      +L A  +A     +L  R++    +Y+  FED+PK   ++ P+IF
Sbjct:  143 DIRFSLGVFLFILGMGINIHSDYILRQLRKPGEVIYKIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCFLGLRAFHHHRFYVKMFEDYPKSRKALIPFIF 254          
BLAST of EY659334 vs. ExPASy Swiss-Prot
Match: S5A1_MOUSE (3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Mus musculus GN=Srd5a1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 2.330e-11
Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 1
Query:   79 GMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVNSIFPYI 393
            G  L+L+G+  N +  ++L  +R+ GE  YKIP  GLF+ V   +Y  E++ + G    + +L    +A+     L  R+     WYL KFED+PK    + P++
Sbjct:  150 GFALWLVGMVINIHSDHILRNLRKPGETGYKIPRGGLFEYVSSANYFGELVEWCGFALASWSLQGVVFALFTLCALFTRARQHHQWYLEKFEDYPKTRKILIPFL 254          
BLAST of EY659334 vs. ExPASy Swiss-Prot
Match: S5A1_BOVIN (3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Bos taurus GN=SRD5A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.330e-11
Identity = 38/130 (29.23%), Postives = 67/130 (51.54%), Query Frame = 1
Query:   28 YVQSEGLGEPTI-------DLKFL-GMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVNSIFPYI 393
            Y+QS  L +  +       D +FL G  L+L+G+  N +  ++L  +R+ GE  YKIP  GLF+ +   +Y  E++ + G    + ++  + +A+     L  R+     WY  KFED+PK    + P++
Sbjct:  127 YLQSRYLSQYAVYADDWLSDPRFLTGSALWLIGMLINIHSDHVLRNLRKPGETGYKIPRGGLFEYISAANYFGEVVEWCGYALASWSIQGWAFAVFTFCVLFTRAQQHHKWYHEKFEDYPKFRKIMIPFL 256          
BLAST of EY659334 vs. ExPASy Swiss-Prot
Match: S5A2_MOUSE (3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Mus musculus GN=Srd5a2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.974e-11
Identity = 35/112 (31.25%), Postives = 64/112 (57.14%), Query Frame = 1
Query:   64 DLKF-LGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVNSIFPYIF 396
            D++F +G+  F+LG+  N +   +L ++R+ GE  Y+IP  GLF  V   ++L EI+ + G      ++ AF +A     +L  +++    +YL  F+D+PK   ++ P+IF
Sbjct:  143 DMRFSVGVFFFILGMGINIHSDCMLRQLRKPGEVIYRIPQGGLFTYVSGANFLGEIIEWMGYALATWSVPAFAFAFFTLCFLGMQAFYHHRFYLKMFKDYPKSRKALIPFIF 254          
BLAST of EY659334 vs. ExPASy Swiss-Prot
Match: S5A1_RAT (3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Rattus norvegicus GN=Srd5a1 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.974e-11
Identity = 33/105 (31.43%), Postives = 56/105 (53.33%), Query Frame = 1
Query:   79 GMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVNSIFPYI 393
            G  L+L+G+  N +  ++L  +R+ GE  YKIP  GLF+ V   +Y  E++ + G    + +L    +A+     L+ R+     WY  KFED+PK    + P++
Sbjct:  154 GFALWLVGMVINIHSDHILRNLRKPGETGYKIPRGGLFEYVSAANYFGELVEWCGFALASWSLQGVVFALFTLSTLLTRAKQHHQWYHEKFEDYPKSRKILIPFV 258          
BLAST of EY659334 vs. ExPASy Swiss-Prot
Match: YFY8_SCHPO (Uncharacterized protein C9.08c OS=Schizosaccharomyces pombe GN=SPAC9.08c PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.190e-11
Identity = 35/125 (28.00%), Postives = 61/125 (48.80%), Query Frame = 1
Query:   70 KFLGMILFLLGISGNFYHHNLLSKMRRNGEKE---------------YKIPTSGLFDKVVCPHYLFEILGFWGIFFIA--QTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVNSIFPYI 393
            +++GM L+L+G  GN YH N+L  +RR+  K+               Y+IP  GLF  V CP+Y  E + ++G +  A       + + +     ++ R+     WY  KF  +P +  +I P++
Sbjct:  157 RYIGMFLWLMGWLGNMYHDNILYDLRRSSNKKKDPDNLDTVQSENSYYRIPYGGLFQYVSCPNYFCEWIEWFGCYLAAGPSAEPFWWFFLSEILLMLPRALKAHQWYCKKFPKYPANRRAIIPFL 281          
The following BLAST results are available for this feature:
BLAST of EY659334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
S5A1_HUMAN1.613e-1233.933-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Homo sa... [more]
S5A2_MACFA2.107e-1234.823-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Macaca ... [more]
S5A1_MACFA2.107e-1233.043-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Macaca ... [more]
S5A2_HUMAN2.752e-1234.823-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Homo sa... [more]
S5A2_PIG4.694e-1234.823-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Sus scr... [more]
S5A1_MOUSE2.330e-1132.383-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Mus mus... [more]
S5A1_BOVIN2.330e-1129.233-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Bos tau... [more]
S5A2_MOUSE3.974e-1131.253-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Mus mus... [more]
S5A1_RAT3.974e-1131.433-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Rattus ... [more]
YFY8_SCHPO5.190e-1128.00Uncharacterized protein C9.08c OS=Schizosaccharomy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-A06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659334 ID=EY659334; Name=EY659334; organism=Citrus sinensis; type=EST; length=445bp
CCACGCGTCCGCACCGCAGCTATGATATATGTTCAAAGTGAAGGATTAGG
AGAGCCAACTATTGATTTGAAGTTTTTGGGGATGATTCTATTTTTGTTGG
GAATAAGCGGCAATTTCTACCACCACAATCTGCTTTCAAAAATGAGAAGA
AACGGTGAAAAAGAATACAAGATTCCCACGAGTGGTTTATTTGATAAAGT
TGTATGCCCCCATTACTTGTTTGAGATATTAGGGTTTTGGGGCATCTTTT
TCATTGCTCAAACTCTGTATGCATTTTGCTATGCTATAGGTGTAACTTTT
TACTTAATGGGAAGAAGCTATGCAACTAGGGCATGGTATCTTTCCAAATT
TGAAGACTTCCCCAAACATGTCAACTCCATTTTTCCATATATTTTTTAGA
AAGGAAAGAAATTAATTCCAATAAAAATTGAATTTTTCTGAGTTG
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