EY659328

Overview
NameEY659328
Unique NameEY659328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659328_ssr783 microsatellite EY659328_ssr783:783..794. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13796 contig Csv1_Contig13796:540..1419. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 313.153 bits (801), Expect = 1.287e-84
Identity = 147/169 (86.98%), Postives = 159/169 (94.08%), Query Frame = 2
Query:    2 LEQYLPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLH 508
            LE YLP+HN+S+SVVLE+F +IGID PGLVALLGSHSVGRTHCVKLVHRLYPEVDP+LNPDHVPHMLHKCPD+IPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGL++VDHQLA DKRTRP VKKMAK Q YFFKEF+RAI +LSENNPLTG+KGEIRK CNLANK H
Sbjct:  162 LESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLTGSKGEIRKQCNLANKNH 330          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.535e-53
Identity = 96/166 (57.83%), Postives = 122/166 (73.49%), Query Frame = 2
Query:    2 LEQYLPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            +E  +PNHNDS+S V+  F +IGID    VALLG+HSVGR HCV LVHRLYP +DP L+P +  ++  +CP   PDP AV Y RNDR TPMV+DN YY+NI+ +KGL+++D +LATD RT P+V KMA   +YF ++FSR + LLSE NPLTG +GEIRK C   N
Sbjct:  162 VETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22
Identity = 57/162 (35.19%), Postives = 91/162 (56.17%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            LP  +  +S ++++F++ G     +VAL G+H++G +HC +  +R+ P      NP     +   C ++  DP    +  ND  TP   DN Y++NI    GL+  DH L +D RTRP+V+  A+ Q  FF +F+ A+  LS +  LTG +GEIR+ C+  N
Sbjct:  169 LPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNPRFAVALKKACSNSKNDPTISVF--NDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.886e-21
Identity = 59/162 (36.42%), Postives = 82/162 (50.62%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            LP    + S ++  FA   ++   LVAL G H++G  HC     RLYP  DP +N      +   CP A      V    ND  +P V DN YY ++++ +GL   D  L  DKRTR  V+  A  Q  FF  F+ A+  + + + LTGT+GEIR  C+  N
Sbjct:  182 LPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLYPNQDPTMNQFFANSLKRTCPTANSSNTQV----NDIRSPDVFDNKYYVDLMNRQGLFTSDQDLFVDKRTRGIVESFAIDQQLFFDYFTVAMIKMGQMSVLTGTQGEIRSNCSARN 339          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.713e-20
Identity = 60/166 (36.14%), Postives = 90/166 (54.22%), Query Frame = 2
Query:    2 LEQYLPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            L   LP  +  +S ++++F + G     +VAL G+HS+G +HC + V R+    +   NP     +   C +   DP    +  ND  TP   DN YY+N+    GL+  DH L +D RTR +V   AK+QD FFK+F++A+  LS     TG +GEIR+ C+  N
Sbjct:  154 LTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEFVGRVGRN-NTGYNPRFAVALKKACANYPKDPTISVF--NDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDAIN 316          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20
Identity = 58/172 (33.72%), Postives = 90/172 (52.33%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK-RTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLHD 511
            +P+   ++  +L  F   G+D   LVALLGSH++G + C+    RLY        D  LN D+   +   CP +  D         D  TP   DN YY+N+++ +GL+  D  L T    T   VK  A+++  FF++F++++  +   +PLTGT GEIR++C   N  HD
Sbjct:  177 IPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNL---DYVTPTKFDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRRICRRVN--HD 343          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.983e-20
Identity = 56/167 (33.53%), Postives = 86/167 (51.50%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            LP+  D ++ +   FA  G+    ++AL G+H++G  HC K+ +R+Y      +VDP +N D+V  +   CP  I DP+    +  D  TP   DN YY+N+   KGL   D  L TD+R++P V   A +   F + F  ++  L      TG+ G IR+ C   N
Sbjct:  166 LPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNI-DPRVA--INMDPTTPRQFDNVYYKNLQQGKGLFTSDQVLFTDRRSKPTVDLWANNGQLFNQAFINSMIKLGRVGVKTGSNGNIRRDCGAFN 329          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.500e-20
Identity = 53/168 (31.55%), Postives = 94/168 (55.95%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            +P  N++ + ++ RF   G+D   +VAL GSH++G + C     RLY +      D  L   +  ++  +CP +  D    +   N  G     DN+Y++N+++N GL+  D  L ++++++R  VKK A+ Q+ FF++F+ ++  +   +PLTG+ GEIRK C   N
Sbjct:  172 IPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCPRSGGDQNLSELDINSAGR---FDNSYFKNLIENMGLLNSDEVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKIN 336          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.894e-19
Identity = 53/168 (31.55%), Postives = 93/168 (55.36%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAT-DKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            +P  N++   +L +F   G+D   LV+L GSH++G + C     RLY +      D  L+  +   +  +CP +  D         D  TP   DN+Y++N++  KGL+  D  L T +K+++  V+  A++Q+ FF++F++++  +   +PLTG KGEIR++C   N
Sbjct:  169 IPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFL---DFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRICRRVN 333          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.894e-19
Identity = 54/170 (31.76%), Postives = 89/170 (52.35%), Query Frame = 2
Query:    2 LEQYLPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDP----ALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            +E  L   N +M  ++  F + G+    +VAL+G+H++G +HC +   R++ + D      +NP +   +   C +   D +   +  ND  TP   DN YY+N+    GL+  DH +A D RTR  V   A+ +  FF  F++A+  +SE N  TG  GE+R+ C+  N
Sbjct:  155 VEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFNKSDQNGPVEMNPKYAAELRKLCANYTNDEQMSAF--NDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNRTRSLVDLYAEDETAFFDAFAKAMEKVSEKNVKTGKLGEVRRRCDQYN 322          
The following BLAST results are available for this feature:
BLAST of EY659328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PER42_ARATH1.287e-8486.98Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH1.535e-5357.83Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER63_ARATH4.076e-2235.19Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER12_ARATH5.886e-2136.42Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER31_ARATH1.713e-2036.14Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER36_ARATH2.237e-2033.72Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER50_ARATH4.983e-2033.53Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER15_ARATH8.500e-2031.55Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER72_ARATH1.894e-1931.55Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER6_ARATH1.894e-1931.76Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-H10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659328 ID=EY659328; Name=EY659328; organism=Citrus sinensis; type=EST; length=881bp
ACTTGAGCAGTATCTCCCAAATCACAATGACAGCATGTCTGTTGTTCTTG
AGAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTA
GGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCT
GTACCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGCATATGC
TCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAGTATGTG
AGGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTATAGGAA
CATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGCTAGCCACCG
ACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCAAGAGTCAAGACTAC
TTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTTTCTGAGAACAACCC
TCTCACAGGTACAAAGGGTGAGATCCGAAAGGTTTGCAATCTTGCCAACA
AGCTCCACGACAAGTCCTAGCTAGCTAACAGCTGTATTAGCTACAACAAG
TTAATAGCTCCAAATTTTTCTTCCTTGTTTCTTCTATGAGGAAGAAAAGA
GTGTGAGATGAGCTCCCAATAAGATGGTTTTTCTAGATCGGTTTGTTTCC
TGTGAGATGTTCGTATTACTGCTATTATGTTCCTTAGATGTACCGTCCAA
TGTTTAAGCCTAGGCTTTCCTTTTCCTCGATGGTGTGAGCTTGATGTTAT
TAATATTCANTAATGGCAGTGGTAAATGAGGGATGTATGTATGTATGCAG
GGATGGTGTATGGGGCATGGATTTTGATATGATGATNATNGATGATNCAT
GCCAAAAAAAAAAAAAAAAAAAAAGGGCNGN
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