EY705309

Overview
NameEY705309
Unique NameEY705309
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7741 contig Csv1_Contig7741:237..1071. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY705309 vs. ExPASy Swiss-Prot
Match: USF_AQUPY (Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.093e-13
Identity = 63/199 (31.66%), Postives = 90/199 (45.23%), Query Frame = 3
Query:    6 NPRVRIKNLAVKISQLNPGFKALIPDLYRRKVGLDTAEAQHLMSGL-----DWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWS 575
            +P   IK +  + +Q   GF A  PD Y  K   +  +A  LM+ +     D   A+    ASV++LK       KKVGVTG+C GG L++  +   P+ +DA V FYG+P     D    K P+     E D FV   +V            +GV  +V +Y G  HAF+N          E   D +DP   + AW+
Sbjct:   39 SPLSNIKEICDRFAQ--EGFVAFAPDFYEGKYADNPDDAGKLMTDMFENRMDKVDAI--FKASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFAGKFPDLIDASVPFYGLPQITKIDAENIKVPIFFILAEKDEFVNNDEV---IDIAKKVWKNGVDVKVKVYSGVTHAFLN----------EKREDVYDPCRAQDAWN 220          
BLAST of EY705309 vs. ExPASy Swiss-Prot
Match: YGHX_ECOLI (Putative uncharacterized protein yghX OS=Escherichia coli (strain K12) GN=yghX PE=5 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 9.250e-13
Identity = 58/196 (29.59%), Postives = 94/196 (47.96%), Query Frame = 3
Query:    3 LNPRVRIKNLAVKISQLNPGFKALIPDLYRRKVGL--DTAEAQHLMSGLDWPGAVKDIHASVNWLKA--NGSKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSR 578
            LNP   I+++A ++++   G+ AL PD      G   +  + + L   +D    + D  A++ +++     + KVG+TG+C GG ++ A++V  PE+   V FYG   P  AD  + +AP+  HF ELD  +     +           +   YE +IYPG  H F N   D   R        +D +A +LAW R
Sbjct:   93 LNPY--IEDVARRVAKA--GYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAP-TADVAKIEAPLLLHFAELDTRIN----EGWPAYEAALKANNKVYEAYIYPGVNHGFHN---DSTPR--------YDKSAADLAWQR 268          
BLAST of EY705309 vs. ExPASy Swiss-Prot
Match: DLHH_AQUAE (Putative carboxymethylenebutenolidase OS=Aquifex aeolicus GN=aq_1997 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.744e-11
Identity = 58/196 (29.59%), Postives = 87/196 (44.39%), Query Frame = 3
Query:    6 NPRVRIKNLAVKISQLNPGFKALIPDLYRRKVGLDTAEAQHLMSGL---DWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAW 572
            +P   IK +  K++  + GF A  PD Y+ +   +  +A  LM+ +         +   ASV ++K       KKVG+TG+C GG LA+  +   PE VDA + FYG+P     +    K P+     E D FV   +V            +GV  +V ++ G  HAF+N          E   D +DP     AW
Sbjct:   39 SPLSNIKEICDKLA--DEGFVAFAPDFYKGQYADNPDDAGKLMTEMFEKRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPEMVDASLPFYGLPQLTQINAENIKVPIFFILAEKDEFVNNDEV---IDIAKTVWKNGVDVQVKVFSGVTHAFLN----------EKREDVYDPKRACEAW 219          
The following BLAST results are available for this feature:
BLAST of EY705309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
USF_AQUPY1.093e-1331.66Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1[more]
YGHX_ECOLI9.250e-1329.59Putative uncharacterized protein yghX OS=Escherich... [more]
DLHH_AQUAE1.744e-1129.59Putative carboxymethylenebutenolidase OS=Aquifex a... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-042-B06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705309 ID=EY705309; Name=EY705309; organism=Citrus sinensis; type=EST; length=835bp
TTCTCAACCCACGCGTCCGGATCAAGAACCTTGCTGTCAAAATCTCCCAA
CTAAACCCTGGATTCAAGGCACTTATACCAGATTTATATCGGCGAAAGGT
TGGTTTGGATACTGCTGAAGCACAGCACTTGATGAGTGGTCTTGATTGGC
CAGGTGCTGTCAAGGATATCCACGCTTCAGTTAATTGGCTTAAGGCAAAT
GGTTCCAAGAAGGTTGGCGTGACTGGATATTGCATGGGAGGTGCTCTCGC
TATTGCAAGTTCTGTCTTAGTTCCTGAGGTTGATGCTGTTGTTTCATTTT
ATGGGGTTCCCCCACCTGAGCTCGCCGATCCTACCCAGGCTAAGGCACCT
GTTCAAGCTCATTTTGGGGAGCTTGACAATTTTGTTGGCTTTTCAGATGT
GAAAACTGCCAAAGCATTGGAGGAAAAGCTGAAAGCATCTGGTGTTCCAT
ATGAGGTACATATTTATCCTGGCAGTGCACATGCTTTCATGAACATTTCT
CCGGATGGAGTGAAGAGGAGGAAAGAAATGGGAATGGATGATCACGATCC
AGCCGCAGTTGAGCTGGCGTGGTCTCGCTTCCATCATGGATGACCCGCTA
CTTATCTGCTTAAGTAATTCACTAGTATTATGAATCTATGGTGTTTACCT
CGCTTCCATCATTAAATAAATACCNGTGTGTATGCCTCTACTCTACATAT
AACACAGCTGCAAGTATCCTTTTGNTTCCAAAGGGGGTCGATACTGGGAT
ATGTCTGNTTGNAGTTTGCCTATATTGNATGTTTGCTGAAAGCTTATTGA
TTATCACAAGGTCAACTTCACACTTGTGTNNNNNN
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