EY659320

Overview
NameEY659320
Unique NameEY659320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659320_ssr1 microsatellite EY659320_ssr1:1..26. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.776e-28
Identity = 93/251 (37.05%), Postives = 135/251 (53.78%), Query Frame = 3
Query:   87 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSFVD-----GQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ-----*CFNNGMLTPLLCPGEGPIIIKRL-------GHGKKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            +EE      AM LASA VLP V+++ +ELD+ E+I K+GPGA +S +E+ AQ+P +  NP+ A   LDR+L LL SY+ L+C+  D      +RLYSLAPV K F+  N DGVS+   + +  DK+ ++ W+ LK   L+  +      N    +      G+       FN GM           II+K++          K +VDVGGG   T N+I S  P  + +  DLP+ I+D P +P + H GG
Sbjct:   14 KEEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQ--NPD-APVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCK-FLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPF----NKAYGMTAFEYHGKDPRFNKVFNQGM------SNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVDHVGG 250          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.815e-28
Identity = 93/253 (36.76%), Postives = 128/253 (50.59%), Query Frame = 3
Query:   87 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSFVD-----GQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHGKK-------LVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            +EE + F  AM LASA VLP +++  +ELD+ EI++KAGPGA LS +EI + +P K  NP+ A   LDR+L LL SY+ L CS  D      +RLY LAPV K F+  N DGVS+ P   +  DK+ ++ W+ LK   L+              +P  +  G   F      P               I +K++    K       LVDVGGG     N I S  P  + +  DLP+ I+D P +P + H GG
Sbjct:   16 DEEAHLF--AMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTK--NPD-APVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCK-FLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGG------------IPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGG 250          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.151e-27
Identity = 93/261 (35.63%), Postives = 133/261 (50.96%), Query Frame = 3
Query:   63 IMASIADQEEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHC---SFVDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHG-------KKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPALHTGGG 785
            I  S+   E+E   F  AM LASA VLP V++A VELD+ EI++K+GPGA +S +E+ AQ+P K  NPE A   LDR+  LL +Y+ L+C   +  DG  +RLYSLAPV K F+  N DGVS+ P + +  DK+ ++ W+ L    L               +P  +  G   F      P               + +K++            +VDVGGG   T N+I S  P  + +  DLP+ I+D P +P +   GG
Sbjct:    4 INQSLTQTEDEA--FVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTK--NPE-APVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCK-FLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGG------------VPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLPHVIRDAPSYPGVEQVGG 246          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.504e-27
Identity = 93/253 (36.76%), Postives = 127/253 (50.20%), Query Frame = 3
Query:   87 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSFVD-----GQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHGKK-------LVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            +EE + F  AM LASA VLP +++  +ELD+ EI++KAGPGA LS +EI + +P K  NP+ A   LDR+L LL SY+ L CS  D      +RLY LAPV K F+  N DGVS+ P   +  DK+ ++ W+ LK   L               +P  +  G   F      P               I +K++    K       LVDVGGG     N I S  P  + +  DLP+ I+D P +P + H GG
Sbjct:   16 DEEAHLF--AMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTK--NPD-APVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCK-FLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGG------------IPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGG 250          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.565e-27
Identity = 93/245 (37.96%), Postives = 132/245 (53.88%), Query Frame = 3
Query:   87 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHC---SFVDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKG-----Q*CFNNGMLTPLLCPGEGPIIIKRLGHG-KKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            EEE   F  AM LASA VLP V+++ +ELD+ E+I+KAGPGA +S +E+ AQ+P   +NPE A   LDR+L LL +Y+ L C   +  DG  +RLY LAPV K F+  N DGVS+ P + +  DK+ ++ W+ LK   L   +      N    +      G        FN GM        +  + + R   G K +VDVGGG   T N+I S  P  + +  +LP+ ++D P    + H GG
Sbjct:    3 EEEACLF--AMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLP--THNPE-APIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCK-FLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPF----NKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSHSGVEHVGG 237          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.375e-27
Identity = 93/252 (36.90%), Postives = 125/252 (49.60%), Query Frame = 3
Query:   90 EETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHC---SFVDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHG-------KKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            +E  NF  AM LASA VLP V+++ +ELD+ E+I KAG GA +S AE+ AQ  L   N E A   LDR+L LL SY  L C   +  DG  QRLY LAPV K F+  N DGVS+ P   +  DK+ ++ W+ LK   L               +P  +  G   F      P               I +K++          K +VDVGGG   T N+I S  P  + +  DLP+ ++D P +P + H GG
Sbjct:   13 DEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQ--LLTTNAE-AHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCK-FLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGG------------IPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDLPHVVEDAPSYPGVEHVGG 248          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.463e-27
Identity = 94/253 (37.15%), Postives = 129/253 (50.99%), Query Frame = 3
Query:   87 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHC---SFVDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHGKK-------LVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            +EE N F  AM LASA VLP V++A +ELD+ EI++KAGPGA LS  E+ AQ+P +  NPE A   LDR+  LL SY+ L C   +  DG  +RLY LAPV K  V+ N DGVS+     +  DKI ++ W+ LK   L+              +P  +  G   F      P               I +K++    K       +VDVGGG     ++I +  P  + +  DLP+ I+D PP P + H GG
Sbjct:   17 DEEANLF--AMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQ--NPE-APVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVK-NEDGVSIAALNLMNQDKILMESWYYLKDAVLEGG------------IPFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFEGLETVVDVGGGTGAVLSMIVAKYPSMKGINFDLPHVIEDAPPLPGVKHVGG 251          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.704e-26
Identity = 93/253 (36.76%), Postives = 128/253 (50.59%), Query Frame = 3
Query:   87 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCS---FVDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHGKK-------LVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            +EE N F  AM LASA VLP V++A +ELD+ EI++KAGPG  LS  +I +Q+P K  NP+ A   LDR+L LL SY+ L  S     DG  +RLY L PV K F+  N +GVS+ P   +  DK+ L+ W+ LK   L+              +P  +  G   F      P               I +K++    K       +VDVGGG     N+I S  P  + +  DLP+ I+D P +P + H GG
Sbjct:   16 DEEANLF--AMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTK--NPD-APVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCK-FLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGG------------IPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGG 250          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.837e-26
Identity = 89/252 (35.32%), Postives = 126/252 (50.00%), Query Frame = 3
Query:   90 EETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHC---SFVDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHG-------KKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            +E  NF  AM LASA VLP V+++ +ELD+ E+I K+G GA +S  ++ AQ+P    NP+ A   LDR+L LL SY  L C   +  DG  +RLY LAPV K F+  N DGVS+ P   +  DK+ ++ W+ L            S    +  +P  +  G   F      P               I +K++          K +VDVGGG   T N+I S  P  + +  DLP+ I+D P +P + H GG
Sbjct:   13 DEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLP--TTNPD-AHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCK-FLTKNEDGVSMAPLTLMNQDKVLMESWYHL------------SDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGG 248          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.837e-26
Identity = 89/252 (35.32%), Postives = 129/252 (51.19%), Query Frame = 3
Query:   87 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHC---SFVDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHGKK-------LVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTG 779
            + E   F  AM LASA VLP V+++ +ELD+ EI++KAGPGA +S +E+ AQ+P K  NPE A   LDR+L LL +Y+ L+C   +  DG  +RLYSLAPV K  +  N DGVS+ P + +  DK+ ++ W+ L    L               +P  +  G   F      P               + +K++    K       +VDVGGG   T N+I S  P  + +  DL + I+D P +P + H G
Sbjct:   10 QTEDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTK--NPE-APVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCK-LLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGG------------VPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLSHVIEDAPAYPGVEHVG 245          
The following BLAST results are available for this feature:
BLAST of EY659320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
COMT1_CATRO1.776e-2837.05Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_POPKI8.815e-2836.76Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_CAPCH1.151e-2735.63Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_POPTM1.504e-2736.76Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_COFCA2.565e-2737.96Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT2_OCIBA4.375e-2736.90Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_EUCGU7.463e-2737.15Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_PRUDU3.704e-2636.76Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_OCIBA4.837e-2635.32Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_CAPAN4.837e-2635.32Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-H01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659320 ID=EY659320; Name=EY659320; organism=Citrus sinensis; type=EST; length=903bp
ATATATATATATATATATATATATATAGACACCTCAAGCAATTAAGAAAG
AAGCAAATTATAATCATGGCTTCTATAGCTGATCAGGAAGAAGAGACAAA
TAATTTCTCACATGCAATGGGACTTGCAAGTGCAATAGTGCTACCTGCAG
TTATGCAAGCAGTGGTAGAGCTTGATGTGTTTGAGATCATAAGCAAAGCC
GGTCCTGGTGCTAAGCTTTCGGTTGCGGAGATTGTGGCTCAAATTCCCTT
AAAAGATAATAATCCTGAAGCTGCAGCCACGACGTTGGATCGGGTGCTGA
TGCTGCTTGTCAGCTACAACGCTCTTCATTGCTCTTTTGTCGATGGACAA
AGGCTCTACTCTCTTGCTCCTGTTTCTAAACACTTTGTTCGCAACAATCG
AGACGGCGTGTCGTTGCGTCCCTACATGGCCTTGTGTCTCGACAAGATCT
GCTTGGATGGCTGGTTTGGATTGAAAATCATATTCTTGAAGGACGAATTG
CGTTTATAAAGCCGCACGAATGCAAATCTATGATTACCTATGCGGCGACT
CAAGGGTCAATGATGTTTCAATAATGGAATGTTAACCCCACTTCTTTGCC
CTGGAGAAGGGCCTATAATCATCAAAAGGCTTGGACATGGTAAAAAACTT
GTTGATGTGGGCGGCGGCGTTAGGACTACCCCTAACTTGATTTTTTCCAA
TACCCCTTATTAAAGGGTTAAATCTGATCTGCCCTATGCCATTAAAGATC
GCCCTCCTTTTCCTGCTCTGCACACCGGGGGGGGATTTATTTCGAAATGT
CTCTCGGGGGGGTACCATTGTTTACAGCGGGAGGCGCCCACTTTTGGGGG
TGAGCCACTCTCAATTGTGGGGACAATGCGCAAAAGTCCTCGCATGCGGG
GGA
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